RNA–Protein interactions for RNA: YOL110W

SHR5, Transcript of Palmitoyltransferase subunit, yeastyeast

Gene SHR5, Length 714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR5YOL110W MLP2P40457 1679 aa22.18■■□□□ 1.14
SHR5YOL110W NUP159P40477 1460 aa22.15■■□□□ 1.14
SHR5YOL110W TAF7Q05021 590 aa22.14■■□□□ 1.13
SHR5YOL110W RPO21P04050 1733 aaKnown RBP22.14■■□□□ 1.13
SHR5YOL110W SNT2P53127 1403 aa22.1■■□□□ 1.13
SHR5YOL110W PDR15Q04182 1529 aaKnown RBP22.08■■□□□ 1.13
SHR5YOL110W ULS1Q08562 1619 aa22.06■■□□□ 1.12
SHR5YOL110W YRF1-1P0CX20 1796 aa21.96■■□□□ 1.11
SHR5YOL110W YRF1-5P0CX21 1796 aa21.96■■□□□ 1.11
SHR5YOL110W YRF1-8P0CX22 1796 aa21.96■■□□□ 1.11
SHR5YOL110W RTT106P40161 455 aa21.93■■□□□ 1.1
SHR5YOL110W GEA2P39993 1459 aaKnown RBP21.92■■□□□ 1.1
SHR5YOL110W VPS15P22219 1454 aa21.88■■□□□ 1.09
SHR5YOL110W LTE1P07866 1435 aa21.88■■□□□ 1.09
SHR5YOL110W IFH1P39520 1085 aa21.87■■□□□ 1.09
SHR5YOL110W GEA1P47102 1408 aaPredicted RBP21.81■■□□□ 1.08
SHR5YOL110W IRC20Q06554 1556 aa21.77■■□□□ 1.08
SHR5YOL110W MET10P39692 1035 aa21.76■■□□□ 1.07
SHR5YOL110W PDR12Q02785 1511 aa21.73■■□□□ 1.07
SHR5YOL110W SPO14P36126 1683 aa21.71■■□□□ 1.07
SHR5YOL110W GDB1Q06625 1536 aa21.63■■□□□ 1.05
SHR5YOL110W TY3B-GQ99315 1547 aa21.62■■□□□ 1.05
SHR5YOL110W CAT8P39113 1433 aa21.6■■□□□ 1.05
SHR5YOL110W NUP157P40064 1391 aaKnown RBP21.58■■□□□ 1.04
SHR5YOL110W YBT1P32386 1661 aa21.56■■□□□ 1.04
SHR5YOL110W PDR10P51533 1564 aa21.53■■□□□ 1.04
SHR5YOL110W NUP170P38181 1502 aa21.52■■□□□ 1.04
SHR5YOL110W DRS2P39524 1355 aa21.51■■□□□ 1.03
SHR5YOL110W IQG1Q12280 1495 aa21.45■■□□□ 1.03
SHR5YOL110W BNI1P41832 1953 aa21.43■■□□□ 1.02
SHR5YOL110W IKI3Q06706 1349 aaKnown RBP21.4■■□□□ 1.02
SHR5YOL110W ITT1Q04638 464 aa21.39■■□□□ 1.01
SHR5YOL110W BUD3P25558 1636 aa21.38■■□□□ 1.01
SHR5YOL110W ARO1P08566 1588 aaKnown RBP21.37■■□□□ 1.01
SHR5YOL110W CKB1P43639 278 aa21.29■■□□□ 1
SHR5YOL110W TRM3Q07527 1436 aa21.26■□□□□ 0.99
SHR5YOL110W DOP1Q03921 1698 aa21.25■□□□□ 0.99
SHR5YOL110W MMS1Q06211 1407 aa21.22■□□□□ 0.99
SHR5YOL110W SRB8P25648 1427 aa21.21■□□□□ 0.99
SHR5YOL110W YSP2Q06681 1438 aa21.17■□□□□ 0.98
SHR5YOL110W SSM4P40318 1319 aa21.12■□□□□ 0.97
SHR5YOL110W CHC1P22137 1653 aaKnown RBP21.09■□□□□ 0.97
SHR5YOL110W SEC7P11075 2009 aaKnown RBP21.07■□□□□ 0.96
SHR5YOL110W BNR1P40450 1375 aa21.05■□□□□ 0.96
SHR5YOL110W DNF2Q12675 1612 aa20.97■□□□□ 0.95
SHR5YOL110W BUD21Q08492 214 aaPredicted RBP20.95■□□□□ 0.94
SHR5YOL110W ABP1P15891 592 aaKnown RBP20.78■□□□□ 0.92
SHR5YOL110W GCN2P15442 1659 aa20.73■□□□□ 0.91
SHR5YOL110W YOR093CQ12275 1648 aa20.71■□□□□ 0.91
SHR5YOL110W NUP188P52593 1655 aaKnown RBP20.61■□□□□ 0.89
SHR5YOL110W URN1Q06525 465 aaKnown RBP20.6■□□□□ 0.89
SHR5YOL110W VMR1P38735 1592 aa20.56■□□□□ 0.88
SHR5YOL110W YAP3P38749 330 aa20.55■□□□□ 0.88
SHR5YOL110W PDR5P33302 1511 aaKnown RBP20.54■□□□□ 0.88
SHR5YOL110W DNF3Q12674 1656 aa20.49■□□□□ 0.87
SHR5YOL110W IML1P47170 1584 aa20.49■□□□□ 0.87
SHR5YOL110W IPL1P38991 367 aa20.43■□□□□ 0.86
SHR5YOL110W MIF2P35201 549 aa20.42■□□□□ 0.86
SHR5YOL110W PAF1P38351 445 aa20.41■□□□□ 0.86
SHR5YOL110W NOP7P53261 605 aaKnown RBP20.35■□□□□ 0.85
SHR5YOL110W TYS1P36421 394 aaKnown RBP20.34■□□□□ 0.85
SHR5YOL110W PDR11P40550 1411 aa20.34■□□□□ 0.85
SHR5YOL110W HAP1P0CE41 1502 aa20.29■□□□□ 0.84
SHR5YOL110W BFR2Q06631 534 aaKnown RBP20.28■□□□□ 0.84
SHR5YOL110W RAV1P47104 1357 aa20.27■□□□□ 0.84
SHR5YOL110W MAK10Q02197 733 aa20.2■□□□□ 0.82
SHR5YOL110W RTC1Q08281 1341 aa20.16■□□□□ 0.82
SHR5YOL110W NUP192P47054 1683 aa20.01■□□□□ 0.79
SHR5YOL110W USO1P25386 1790 aa19.95■□□□□ 0.78
SHR5YOL110W BCK1Q01389 1478 aa19.95■□□□□ 0.78
SHR5YOL110W TY1B-NL2Q99337 1749 aaKnown RBP19.93■□□□□ 0.78
SHR5YOL110W ESL2P36168 1195 aa19.91■□□□□ 0.78
SHR5YOL110W TAF5P38129 798 aa19.9■□□□□ 0.78
SHR5YOL110W MRX12P47084 519 aa19.89■□□□□ 0.77
SHR5YOL110W RAD9P14737 1309 aa19.88■□□□□ 0.77
SHR5YOL110W ALD4P46367 519 aaKnown RBP19.88■□□□□ 0.77
SHR5YOL110W KRE5P22023 1365 aa19.87■□□□□ 0.77
SHR5YOL110W CAB1Q04430 367 aa19.84■□□□□ 0.77
SHR5YOL110W YFR006WP43590 535 aa19.81■□□□□ 0.76
SHR5YOL110W RIA1P53893 1110 aa19.81■□□□□ 0.76
SHR5YOL110W CFT1Q06632 1357 aaKnown RBP19.81■□□□□ 0.76
SHR5YOL110W TY3B-IQ7LHG5 1498 aaKnown RBP19.79■□□□□ 0.76
SHR5YOL110W YMR196WQ04336 1088 aa19.78■□□□□ 0.76
SHR5YOL110W NAP1P25293 417 aaKnown RBP19.76■□□□□ 0.75
SHR5YOL110W POL5P39985 1022 aaKnown RBP19.76■□□□□ 0.75
SHR5YOL110W TAF8Q03750 510 aa19.72■□□□□ 0.75
SHR5YOL110W KIP3P53086 805 aaKnown RBP19.71■□□□□ 0.75
SHR5YOL110W ORC1P54784 914 aaPredicted RBP19.7■□□□□ 0.74
SHR5YOL110W THI12P42883 340 aa19.65■□□□□ 0.74
SHR5YOL110W THI5P43534 340 aa19.65■□□□□ 0.74
SHR5YOL110W THI11P47183 340 aa19.65■□□□□ 0.74
SHR5YOL110W YNR029CP53729 429 aaKnown RBP19.65■□□□□ 0.74
SHR5YOL110W THI13Q07748 340 aa19.65■□□□□ 0.74
SHR5YOL110W YLR419WQ06698 1435 aaKnown RBP19.64■□□□□ 0.73
SHR5YOL110W SPE2P21182 396 aa19.63■□□□□ 0.73
SHR5YOL110W SCT1P32784 759 aa19.59■□□□□ 0.73
SHR5YOL110W MHP1P43638 1398 aa19.48■□□□□ 0.71
SHR5YOL110W RCM1P53972 490 aa19.47■□□□□ 0.71
SHR5YOL110W CHZ1P40019 153 aaPredicted RBP19.43■□□□□ 0.7
SHR5YOL110W CPS1P27614 576 aa19.4■□□□□ 0.7
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms