RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS2	YOL047C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.42	□□□□□ -1.54	not detected
LDS2	YOL047C	SAM3	Q08986	587 aa		5.41	□□□□□ -1.54
LDS2	YOL047C	YFR006W	P43590	535 aa		5.4	□□□□□ -1.54
LDS2	YOL047C	SPB4	P25808	606 aa	Predicted RBP	5.38	□□□□□ -1.55
LDS2	YOL047C	XDJ1	P39102	459 aa		5.37	□□□□□ -1.55
LDS2	YOL047C	IOC4	Q04213	475 aa		5.37	□□□□□ -1.55
LDS2	YOL047C	VPS29	P38759	282 aa		5.36	□□□□□ -1.55
LDS2	YOL047C	CST9	Q06032	482 aa		5.36	□□□□□ -1.55
LDS2	YOL047C	RGA2	Q06407	1009 aa		5.36	□□□□□ -1.55
LDS2	YOL047C	VRP1	P37370	817 aa		5.35	□□□□□ -1.55
LDS2	YOL047C	STS1	P38637	319 aa		5.34	□□□□□ -1.55
LDS2	YOL047C	CKB1	P43639	278 aa		5.34	□□□□□ -1.55
LDS2	YOL047C	RTG3	P38165	486 aa		5.33	□□□□□ -1.56
LDS2	YOL047C	HTA1	P04911	132 aa	Known RBP	5.32	□□□□□ -1.56
LDS2	YOL047C	HTA2	P04912	132 aa		5.32	□□□□□ -1.56
LDS2	YOL047C	MGA2	P40578	1113 aa		5.32	□□□□□ -1.56
LDS2	YOL047C	GYP5	Q12344	894 aa		5.32	□□□□□ -1.56
LDS2	YOL047C	DPS1	P04802	557 aa	Known RBP	5.31	□□□□□ -1.56
LDS2	YOL047C	PTC4	P38089	393 aa		5.31	□□□□□ -1.56
LDS2	YOL047C	YEL023C	P39992	682 aa		5.3	□□□□□ -1.56
LDS2	YOL047C	VPS70	P47161	811 aa		5.3	□□□□□ -1.56
LDS2	YOL047C	DCW1	P36091	449 aa		5.28	□□□□□ -1.56
LDS2	YOL047C	YML020W	Q03722	664 aa		5.28	□□□□□ -1.56
LDS2	YOL047C	NAP1	P25293	417 aa	Known RBP	5.27	□□□□□ -1.57
LDS2	YOL047C	KIN1	P13185	1064 aa		5.26	□□□□□ -1.57
LDS2	YOL047C	ORC1	P54784	914 aa	Predicted RBP	5.26	□□□□□ -1.57
LDS2	YOL047C	AIM44	Q99299	758 aa		5.26	□□□□□ -1.57
LDS2	YOL047C	SPA2	P23201	1466 aa	Known RBP	5.26	□□□□□ -1.57
LDS2	YOL047C	ELP4	Q02884	456 aa	Known RBP	5.25	□□□□□ -1.57
LDS2	YOL047C	SET1	P38827	1080 aa	Known RBP	5.23	□□□□□ -1.57
LDS2	YOL047C	RGA1	P39083	1007 aa		5.22	□□□□□ -1.57
LDS2	YOL047C	YDR344C	Q05510	147 aa		5.22	□□□□□ -1.57
LDS2	YOL047C	GLC3	P32775	704 aa		5.21	□□□□□ -1.58
LDS2	YOL047C	PML39	Q03760	334 aa		5.21	□□□□□ -1.58
LDS2	YOL047C	RAM2	P29703	316 aa		5.2	□□□□□ -1.58
LDS2	YOL047C	RCR1	P38212	213 aa		5.17	□□□□□ -1.58
LDS2	YOL047C	GUA1	P38625	525 aa	Known RBP	5.16	□□□□□ -1.58
LDS2	YOL047C	SLX8	P40072	274 aa		5.16	□□□□□ -1.58
LDS2	YOL047C	ARH1	P48360	493 aa		5.16	□□□□□ -1.58
LDS2	YOL047C	SRC1	Q03707	834 aa		5.16	□□□□□ -1.58
LDS2	YOL047C	YPR148C	Q06523	435 aa		5.16	□□□□□ -1.58
LDS2	YOL047C	NOP8	Q08287	484 aa	Predicted RBP	5.15	□□□□□ -1.59
LDS2	YOL047C	SGS1	P35187	1447 aa		5.14	□□□□□ -1.59
LDS2	YOL047C	PBS2	P08018	668 aa		5.14	□□□□□ -1.59
LDS2	YOL047C	DSF2	P38213	736 aa		5.13	□□□□□ -1.59
LDS2	YOL047C	YNR021W	P53723	404 aa	Known RBP	5.13	□□□□□ -1.59
LDS2	YOL047C	SSN2	P38931	1420 aa		5.13	□□□□□ -1.59
LDS2	YOL047C	GRE2	Q12068	342 aa	Known RBP	5.12	□□□□□ -1.59
LDS2	YOL047C	SKI3	P17883	1432 aa	Known RBP	5.12	□□□□□ -1.59
LDS2	YOL047C	SPT23	P35210	1082 aa		5.11	□□□□□ -1.59
LDS2	YOL047C	GEF1	P37020	779 aa		5.1	□□□□□ -1.59
LDS2	YOL047C	IES2	P40154	320 aa		5.1	□□□□□ -1.59
LDS2	YOL047C	SSA1	P10591	642 aa	Known RBP	5.09	□□□□□ -1.59
LDS2	YOL047C	DIT2	P21595	489 aa		5.09	□□□□□ -1.59
LDS2	YOL047C	NOP2	P40991	618 aa	Known RBP	5.09	□□□□□ -1.59
LDS2	YOL047C	HGH1	P48362	394 aa	Known RBP	5.09	□□□□□ -1.59
LDS2	YOL047C	SUB2	Q07478	446 aa	Known RBP	5.09	□□□□□ -1.59
LDS2	YOL047C	MID1	P41821	548 aa		5.08	□□□□□ -1.6
LDS2	YOL047C	TFB3	Q03290	321 aa		5.08	□□□□□ -1.6
LDS2	YOL047C	PEX29	Q03370	554 aa		5.08	□□□□□ -1.6
LDS2	YOL047C	MAM3	Q12296	706 aa		5.08	□□□□□ -1.6
LDS2	YOL047C	PKC1	P24583	1151 aa		5.06	□□□□□ -1.6
LDS2	YOL047C	ATH1	P48016	1211 aa		5.05	□□□□□ -1.6
LDS2	YOL047C	HAP5	Q02516	242 aa		5.04	□□□□□ -1.6
LDS2	YOL047C	AIM7	Q12156	149 aa		5.04	□□□□□ -1.6
LDS2	YOL047C	GUT1	P32190	709 aa		5.03	□□□□□ -1.6
LDS2	YOL047C	MRX12	P47084	519 aa		5.03	□□□□□ -1.6
LDS2	YOL047C	NUP42	P49686	430 aa	Known RBP	5.03	□□□□□ -1.6
LDS2	YOL047C	NOP7	P53261	605 aa	Known RBP	5.03	□□□□□ -1.6
LDS2	YOL047C	PTC2	P39966	464 aa	Known RBP	5.02	□□□□□ -1.61
LDS2	YOL047C	BNI4	P53858	892 aa		5.02	□□□□□ -1.61
LDS2	YOL047C	YML082W	Q04533	649 aa	Known RBP	5.01	□□□□□ -1.61
LDS2	YOL047C	MIF2	P35201	549 aa		5	□□□□□ -1.61
LDS2	YOL047C	BIM1	P40013	344 aa		4.99	□□□□□ -1.61
LDS2	YOL047C	ATG32	P40458	529 aa		4.99	□□□□□ -1.61
LDS2	YOL047C	YJL007C	P47080	104 aa		4.99	□□□□□ -1.61
LDS2	YOL047C	ATF2	P53296	535 aa		4.99	□□□□□ -1.61
LDS2	YOL047C	NST1	P53935	1240 aa		4.99	□□□□□ -1.61
LDS2	YOL047C	ERG12	P07277	443 aa		4.98	□□□□□ -1.61
LDS2	YOL047C	GLN1	P32288	370 aa	Known RBP	4.98	□□□□□ -1.61
LDS2	YOL047C	PTC3	P34221	468 aa	Known RBP	4.98	□□□□□ -1.61
LDS2	YOL047C	RAS1	P01119	309 aa		4.97	□□□□□ -1.61
LDS2	YOL047C	AI4	P03878	556 aa		4.97	□□□□□ -1.61
LDS2	YOL047C	CPS1	P27614	576 aa		4.97	□□□□□ -1.61
LDS2	YOL047C	HPC2	Q01448	625 aa		4.97	□□□□□ -1.61
LDS2	YOL047C	MPH3	P0CE00	602 aa		4.96	□□□□□ -1.62
LDS2	YOL047C	MAK11	P20484	414 aa	Known RBP	4.96	□□□□□ -1.62
LDS2	YOL047C	MET10	P39692	1035 aa		4.96	□□□□□ -1.62
LDS2	YOL047C	BRL1	P38770	471 aa		4.95	□□□□□ -1.62
LDS2	YOL047C	URN1	Q06525	465 aa	Known RBP	4.95	□□□□□ -1.62
LDS2	YOL047C	INO80	P53115	1489 aa		4.94	□□□□□ -1.62
LDS2	YOL047C	COQ8	P27697	501 aa		4.94	□□□□□ -1.62
LDS2	YOL047C	RRN6	P32786	894 aa		4.94	□□□□□ -1.62
LDS2	YOL047C	PAM1	P37304	830 aa	Known RBP	4.94	□□□□□ -1.62
LDS2	YOL047C	REF2	P42073	533 aa	Predicted RBP	4.94	□□□□□ -1.62
LDS2	YOL047C	TRK1	P12685	1235 aa		4.93	□□□□□ -1.62
LDS2	YOL047C	EDS1	P38073	919 aa		4.93	□□□□□ -1.62
LDS2	YOL047C	SOL3	P38858	249 aa		4.93	□□□□□ -1.62
LDS2	YOL047C	SNU71	P53207	620 aa	Known RBP	4.93	□□□□□ -1.62
LDS2	YOL047C	MAK21	Q12176	1025 aa	Known RBP	4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms