RNA–Protein interactions for RNA: YNR026C

SEC12, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene SEC12, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC12YNR026C DCW1P36091 449 aa9.61□□□□□ -0.87
SEC12YNR026C HTA1P04911 132 aaKnown RBP9.6□□□□□ -0.87
SEC12YNR026C HTA2P04912 132 aa9.6□□□□□ -0.87
SEC12YNR026C PTC4P38089 393 aa9.59□□□□□ -0.87
SEC12YNR026C YEL023CP39992 682 aa9.57□□□□□ -0.88
SEC12YNR026C YDR344CQ05510 147 aa9.49□□□□□ -0.89
SEC12YNR026C VRP1P37370 817 aa9.48□□□□□ -0.89
SEC12YNR026C XDJ1P39102 459 aa9.46□□□□□ -0.9
SEC12YNR026C PML39Q03760 334 aa9.41□□□□□ -0.9
SEC12YNR026C ELP4Q02884 456 aaKnown RBP9.38□□□□□ -0.91
SEC12YNR026C GRE2Q12068 342 aaKnown RBP9.36□□□□□ -0.91
SEC12YNR026C DPS1P04802 557 aaKnown RBP9.31□□□□□ -0.92
SEC12YNR026C MID1P41821 548 aa9.27□□□□□ -0.93
SEC12YNR026C ARH1P48360 493 aa9.27□□□□□ -0.93
SEC12YNR026C MIF2P35201 549 aa9.26□□□□□ -0.93
SEC12YNR026C ATH1P48016 1211 aa9.24□□□□□ -0.93
SEC12YNR026C GUT1P32190 709 aa9.23□□□□□ -0.93
SEC12YNR026C NST1P53935 1240 aa9.22□□□□□ -0.93
SEC12YNR026C PTC3P34221 468 aaKnown RBP9.22□□□□□ -0.93
SEC12YNR026C EDS1P38073 919 aa9.22□□□□□ -0.93
SEC12YNR026C SGS1P35187 1447 aa9.21□□□□□ -0.94
SEC12YNR026C MAK11P20484 414 aaKnown RBP9.16□□□□□ -0.94
SEC12YNR026C SPT23P35210 1082 aa9.16□□□□□ -0.94
SEC12YNR026C SOL3P38858 249 aa9.16□□□□□ -0.94
SEC12YNR026C RAM2P29703 316 aa9.13□□□□□ -0.95
SEC12YNR026C PEX29Q03370 554 aa9.13□□□□□ -0.95
SEC12YNR026C SRC1Q03707 834 aa9.12□□□□□ -0.95
SEC12YNR026C MPH3P0CE00 602 aa9.1□□□□□ -0.95
SEC12YNR026C HAP5Q02516 242 aa9.08□□□□□ -0.96
SEC12YNR026C RGA2Q06407 1009 aa9.08□□□□□ -0.96
SEC12YNR026C AI4P03878 556 aa9.07□□□□□ -0.96
SEC12YNR026C COQ8P27697 501 aa9.05□□□□□ -0.96
SEC12YNR026C ILV3P39522 585 aaKnown RBP9.05□□□□□ -0.96
SEC12YNR026C BNI4P53858 892 aa9.04□□□□□ -0.96
SEC12YNR026C YML082WQ04533 649 aaKnown RBP9.02□□□□□ -0.97
SEC12YNR026C PTC2P39966 464 aaKnown RBP9□□□□□ -0.97
SEC12YNR026C SPA2P23201 1466 aaKnown RBP8.99□□□□□ -0.97
SEC12YNR026C MPC54Q08550 464 aa8.98□□□□□ -0.97
SEC12YNR026C RGA1P39083 1007 aa8.95□□□□□ -0.98
SEC12YNR026C NMA111P53920 997 aa8.94□□□□□ -0.98
SEC12YNR026C YGR273CP53329 174 aa8.93□□□□□ -0.98
SEC12YNR026C SSN2P38931 1420 aa8.93□□□□□ -0.98
SEC12YNR026C INO80P53115 1489 aa8.93□□□□□ -0.98
SEC12YNR026C RAS1P01119 309 aa8.91□□□□□ -0.98
SEC12YNR026C SLI15P38283 698 aa8.87□□□□□ -0.99
SEC12YNR026C YPR015CQ12531 247 aa8.85□□□□□ -0.99
SEC12YNR026C DPL1Q05567 589 aa8.84□□□□□ -0.99
SEC12YNR026C NOP53Q12080 455 aaKnown RBP8.82□□□□□ -1
SEC12YNR026C RAM1P22007 431 aa8.78□□□□□ -1
SEC12YNR026C TCB3Q03640 1545 aaKnown RBP8.74□□□□□ -1.01
SEC12YNR026C ISU2Q12056 156 aa8.73□□□□□ -1.01
SEC12YNR026C AMS1P22855 1083 aa8.71□□□□□ -1.02
SEC12YNR026C TRK1P12685 1235 aa8.7□□□□□ -1.02
SEC12YNR026C GYP1Q08484 637 aa8.7□□□□□ -1.02
SEC12YNR026C KEX1P09620 729 aa8.69□□□□□ -1.02
SEC12YNR026C CDC73Q06697 393 aa8.69□□□□□ -1.02
SEC12YNR026C RQC2Q12532 1038 aaKnown RBP8.66□□□□□ -1.02
SEC12YNR026C SDH2P21801 266 aa8.65□□□□□ -1.02
SEC12YNR026C TY1B-DR4Q07793 1604 aa8.65□□□□□ -1.02
SEC12YNR026C PDR1P12383 1068 aa8.64□□□□□ -1.03
SEC12YNR026C SAS4Q04003 481 aa8.59□□□□□ -1.03
SEC12YNR026C HSL1P34244 1518 aa8.57□□□□□ -1.04
SEC12YNR026C UBP14P38237 781 aaKnown RBP8.56□□□□□ -1.04
SEC12YNR026C YLR326WQ06170 240 aaKnown RBP8.55□□□□□ -1.04
SEC12YNR026C SPT6P23615 1451 aaKnown RBP8.52□□□□□ -1.05
SEC12YNR026C PCS60P38137 543 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
SEC12YNR026C VHR2P40041 505 aa8.51□□□□□ -1.05
SEC12YNR026C YEL077CQ3E7X8 1277 aa8.51□□□□□ -1.05
SEC12YNR026C YPL062WQ02781 134 aa8.48□□□□□ -1.05
SEC12YNR026C BUD20Q08004 166 aaPredicted RBP8.46□□□□□ -1.06
SEC12YNR026C MRF1P30775 413 aaPredicted RBP8.45□□□□□ -1.06
SEC12YNR026C RAD54P32863 898 aa8.44□□□□□ -1.06
SEC12YNR026C SET1P38827 1080 aaKnown RBP8.42□□□□□ -1.06
SEC12YNR026C HIR3P47171 1648 aa8.42□□□□□ -1.06
SEC12YNR026C XRN1P22147 1528 aaKnown RBP8.41□□□□□ -1.06
SEC12YNR026C PRT1P06103 763 aaKnown RBP8.4□□□□□ -1.06
SEC12YNR026C RPP1BP10622 106 aaKnown RBP8.4□□□□□ -1.06
SEC12YNR026C YRR1Q12172 810 aa8.39□□□□□ -1.07
SEC12YNR026C MON2P48563 1636 aaPredicted RBP8.39□□□□□ -1.07
SEC12YNR026C AIR1P40507 360 aaKnown RBP8.37□□□□□ -1.07
SEC12YNR026C STR2P47164 639 aa8.37□□□□□ -1.07
SEC12YNR026C SWR1Q05471 1514 aa8.36□□□□□ -1.07
SEC12YNR026C BRE2P43132 505 aa8.35□□□□□ -1.07
SEC12YNR026C ISM1P48526 1002 aa8.35□□□□□ -1.07
SEC12YNR026C ERG12P07277 443 aa8.34□□□□□ -1.07
SEC12YNR026C CLA4P48562 842 aa8.34□□□□□ -1.07
SEC12YNR026C YDR090CQ03193 310 aa8.33□□□□□ -1.08
SEC12YNR026C GAR1P28007 205 aaKnown RBP8.32□□□□□ -1.08
SEC12YNR026C DMA1P38823 416 aa8.32□□□□□ -1.08
SEC12YNR026C CST6P40535 587 aa8.32□□□□□ -1.08
SEC12YNR026C REV3P14284 1504 aa8.32□□□□□ -1.08
SEC12YNR026C PEX21P50091 288 aa8.31□□□□□ -1.08
SEC12YNR026C GCR2Q01722 534 aa8.29□□□□□ -1.08
SEC12YNR026C THO2P53552 1597 aaKnown RBP8.29□□□□□ -1.08
SEC12YNR026C GAP1P19145 602 aaPredicted RBP8.29□□□□□ -1.08
SEC12YNR026C NUD1P32336 851 aa8.28□□□□□ -1.08
SEC12YNR026C TUM1Q08686 304 aaKnown RBP8.28□□□□□ -1.08
SEC12YNR026C GBP2P25555 427 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
SEC12YNR026C CSC1Q06538 782 aa8.25□□□□□ -1.09
SEC12YNR026C LAM6Q08001 693 aa8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms