RNA–Protein interactions for RNA: YNL321W

VNX1, Transcript of Calcium/H+ antiporter localized to the endoplasmic reticulum membrane, yeastyeast

Gene VNX1, Length 2,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VNX1YNL321W NUP170P38181 1502 aa8.34□□□□□ -1.07
VNX1YNL321W ESC1Q03661 1658 aaKnown RBP8.33□□□□□ -1.08
VNX1YNL321W TY1B-JR2P47100 1755 aaKnown RBP8.32□□□□□ -1.08
VNX1YNL321W TY1B-ER2Q03619 1755 aa8.32□□□□□ -1.08
VNX1YNL321W TY1B-MR1Q04214 1755 aa8.32□□□□□ -1.08
VNX1YNL321W TY1B-MR2Q04670 1755 aaKnown RBP8.32□□□□□ -1.08
VNX1YNL321W TY1B-LR1Q12088 1755 aaKnown RBP8.32□□□□□ -1.08
VNX1YNL321W TY1B-NL1Q12112 1755 aa8.32□□□□□ -1.08
VNX1YNL321W TY1B-GR1Q12141 1755 aa8.32□□□□□ -1.08
VNX1YNL321W TY1B-BLQ12490 1755 aa8.32□□□□□ -1.08
VNX1YNL321W RPA190P10964 1664 aaKnown RBP8.32□□□□□ -1.08
VNX1YNL321W DNF1P32660 1571 aa8.31□□□□□ -1.08
VNX1YNL321W GEA2P39993 1459 aaKnown RBP8.3□□□□□ -1.08
VNX1YNL321W NTE1Q04958 1679 aa8.29□□□□□ -1.08
VNX1YNL321W RPO21P04050 1733 aaKnown RBP8.27□□□□□ -1.09
VNX1YNL321W IFH1P39520 1085 aa8.27□□□□□ -1.09
VNX1YNL321W CAT8P39113 1433 aa8.26□□□□□ -1.09
VNX1YNL321W IRC20Q06554 1556 aa8.26□□□□□ -1.09
VNX1YNL321W NUP159P40477 1460 aa8.24□□□□□ -1.09
VNX1YNL321W MET5P47169 1442 aa8.24□□□□□ -1.09
VNX1YNL321W TY3B-GQ99315 1547 aa8.24□□□□□ -1.09
VNX1YNL321W RTT106P40161 455 aa8.23□□□□□ -1.09
VNX1YNL321W VPS15P22219 1454 aa8.21□□□□□ -1.1
VNX1YNL321W PDR12Q02785 1511 aa8.2□□□□□ -1.1
VNX1YNL321W ABP1P15891 592 aaKnown RBP8.18□□□□□ -1.1
VNX1YNL321W YBT1P32386 1661 aa8.18□□□□□ -1.1
VNX1YNL321W SSM4P40318 1319 aa8.18□□□□□ -1.1
VNX1YNL321W LEU3P08638 886 aa8.17□□□□□ -1.1
VNX1YNL321W NAP1P25293 417 aaKnown RBP8.16□□□□□ -1.1
VNX1YNL321W IOC4Q04213 475 aa8.16□□□□□ -1.1
VNX1YNL321W MET10P39692 1035 aa8.16□□□□□ -1.1
VNX1YNL321W GDB1Q06625 1536 aa8.14□□□□□ -1.11
VNX1YNL321W URN1Q06525 465 aaKnown RBP8.13□□□□□ -1.11
VNX1YNL321W PDR10P51533 1564 aa8.12□□□□□ -1.11
VNX1YNL321W SRB8P25648 1427 aa8.11□□□□□ -1.11
VNX1YNL321W YRF1-1P0CX20 1796 aa8.1□□□□□ -1.11
VNX1YNL321W YRF1-5P0CX21 1796 aa8.1□□□□□ -1.11
VNX1YNL321W YRF1-8P0CX22 1796 aa8.1□□□□□ -1.11
VNX1YNL321W SPO14P36126 1683 aa8.1□□□□□ -1.11
VNX1YNL321W ARO1P08566 1588 aaKnown RBP8.1□□□□□ -1.11
VNX1YNL321W NUP157P40064 1391 aaKnown RBP8.09□□□□□ -1.11
VNX1YNL321W MMS1Q06211 1407 aa8.06□□□□□ -1.12
VNX1YNL321W BUD3P25558 1636 aa8.06□□□□□ -1.12
VNX1YNL321W DMA2P53924 522 aa8.06□□□□□ -1.12
VNX1YNL321W IQG1Q12280 1495 aa8.04□□□□□ -1.12
VNX1YNL321W LTE1P07866 1435 aa8.04□□□□□ -1.12
VNX1YNL321W ORC1P54784 914 aaPredicted RBP8.03□□□□□ -1.12
VNX1YNL321W YSP2Q06681 1438 aa8.01□□□□□ -1.13
VNX1YNL321W CKB1P43639 278 aa8□□□□□ -1.13
VNX1YNL321W GCN2P15442 1659 aa7.99□□□□□ -1.13
VNX1YNL321W TRM3Q07527 1436 aa7.98□□□□□ -1.13
VNX1YNL321W BUD21Q08492 214 aaPredicted RBP7.96□□□□□ -1.13
VNX1YNL321W BNR1P40450 1375 aa7.93□□□□□ -1.14
VNX1YNL321W DRS2P39524 1355 aa7.91□□□□□ -1.14
VNX1YNL321W PDR5P33302 1511 aaKnown RBP7.91□□□□□ -1.14
VNX1YNL321W DOP1Q03921 1698 aa7.9□□□□□ -1.14
VNX1YNL321W AIM44Q99299 758 aa7.89□□□□□ -1.15
VNX1YNL321W PTP3P40048 928 aa7.87□□□□□ -1.15
VNX1YNL321W RLF2Q12495 606 aa7.87□□□□□ -1.15
VNX1YNL321W SEC7P11075 2009 aaKnown RBP7.87□□□□□ -1.15
VNX1YNL321W YOR093CQ12275 1648 aa7.86□□□□□ -1.15
VNX1YNL321W CHC1P22137 1653 aaKnown RBP7.86□□□□□ -1.15
VNX1YNL321W NOP7P53261 605 aaKnown RBP7.85□□□□□ -1.15
VNX1YNL321W PAF1P38351 445 aa7.84□□□□□ -1.15
VNX1YNL321W POL5P39985 1022 aaKnown RBP7.83□□□□□ -1.16
VNX1YNL321W RAV1P47104 1357 aa7.79□□□□□ -1.16
VNX1YNL321W NUP188P52593 1655 aaKnown RBP7.79□□□□□ -1.16
VNX1YNL321W DNF2Q12675 1612 aa7.78□□□□□ -1.16
VNX1YNL321W BNI1P41832 1953 aa7.78□□□□□ -1.16
VNX1YNL321W ITT1Q04638 464 aa7.77□□□□□ -1.17
VNX1YNL321W VMR1P38735 1592 aa7.76□□□□□ -1.17
VNX1YNL321W RPN1P38764 993 aaKnown RBP7.76□□□□□ -1.17
VNX1YNL321W RTC1Q08281 1341 aa7.76□□□□□ -1.17
VNX1YNL321W IML1P47170 1584 aa7.76□□□□□ -1.17
VNX1YNL321W SEC3P33332 1336 aaKnown RBP7.73□□□□□ -1.17
VNX1YNL321W TY3B-IQ7LHG5 1498 aaKnown RBP7.72□□□□□ -1.17
VNX1YNL321W PDR11P40550 1411 aa7.72□□□□□ -1.17
VNX1YNL321W HAP1P0CE41 1502 aa7.72□□□□□ -1.17
VNX1YNL321W SCT1P32784 759 aa7.7□□□□□ -1.18
VNX1YNL321W MHP1P43638 1398 aa7.68□□□□□ -1.18
VNX1YNL321W ESL2P36168 1195 aa7.67□□□□□ -1.18
VNX1YNL321W IPL1P38991 367 aa7.67□□□□□ -1.18
VNX1YNL321W NOP8Q08287 484 aaPredicted RBP7.64□□□□□ -1.19
VNX1YNL321W YAP3P38749 330 aa7.64□□□□□ -1.19
VNX1YNL321W YRB30P53107 440 aaPredicted RBP7.64□□□□□ -1.19
VNX1YNL321W ENP1P38333 483 aaKnown RBP7.63□□□□□ -1.19
VNX1YNL321W NUP192P47054 1683 aa7.62□□□□□ -1.19
VNX1YNL321W TOP1P04786 769 aa7.62□□□□□ -1.19
VNX1YNL321W YLR419WQ06698 1435 aaKnown RBP7.61□□□□□ -1.19
VNX1YNL321W TYS1P36421 394 aaKnown RBP7.6□□□□□ -1.19
VNX1YNL321W TAF5P38129 798 aa7.6□□□□□ -1.19
VNX1YNL321W SSP1P38871 571 aa7.6□□□□□ -1.19
VNX1YNL321W SNU71P53207 620 aaKnown RBP7.6□□□□□ -1.19
VNX1YNL321W YML020WQ03722 664 aa7.59□□□□□ -1.19
VNX1YNL321W BCK1Q01389 1478 aa7.58□□□□□ -1.2
VNX1YNL321W NSR1P27476 414 aaKnown RBP RIP-Chip data7.57□□□□□ -1.2not detected
VNX1YNL321W SPT7P35177 1332 aa7.57□□□□□ -1.2
VNX1YNL321W ALD4P46367 519 aaKnown RBP7.56□□□□□ -1.2
VNX1YNL321W KIP3P53086 805 aaKnown RBP7.56□□□□□ -1.2
VNX1YNL321W DNF3Q12674 1656 aa7.55□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms