RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W DCW1P36091 449 aa6.76□□□□□ -1.33
SRP1YNL189W DSF2P38213 736 aa6.76□□□□□ -1.33
SRP1YNL189W TIF11P38912 153 aaKnown RBP6.75□□□□□ -1.33
SRP1YNL189W VHR2P40041 505 aa6.75□□□□□ -1.33
SRP1YNL189W MSB4Q12317 492 aa6.74□□□□□ -1.33
SRP1YNL189W UBP14P38237 781 aaKnown RBP6.73□□□□□ -1.33
SRP1YNL189W YGR273CP53329 174 aa6.72□□□□□ -1.33
SRP1YNL189W NST1P53935 1240 aa6.72□□□□□ -1.33
SRP1YNL189W YDR090CQ03193 310 aa6.72□□□□□ -1.33
SRP1YNL189W YLR326WQ06170 240 aaKnown RBP6.72□□□□□ -1.33
SRP1YNL189W EAP1P36041 632 aaKnown RBP6.69□□□□□ -1.34
SRP1YNL189W ULI1P43604 169 aa6.69□□□□□ -1.34
SRP1YNL189W IES2P40154 320 aa6.68□□□□□ -1.34
SRP1YNL189W MAM3Q12296 706 aa6.68□□□□□ -1.34
SRP1YNL189W COX6P00427 148 aa6.68□□□□□ -1.34
SRP1YNL189W ILV3P39522 585 aaKnown RBP6.68□□□□□ -1.34
SRP1YNL189W HTA1P04911 132 aaKnown RBP6.67□□□□□ -1.34
SRP1YNL189W HTA2P04912 132 aa6.67□□□□□ -1.34
SRP1YNL189W KEX1P09620 729 aa6.67□□□□□ -1.34
SRP1YNL189W DIT2P21595 489 aa6.67□□□□□ -1.34
SRP1YNL189W RPN1P38764 993 aaKnown RBP6.67□□□□□ -1.34
SRP1YNL189W NUP42P49686 430 aaKnown RBP6.66□□□□□ -1.34
SRP1YNL189W IOC2Q12072 812 aa6.66□□□□□ -1.34
SRP1YNL189W TRP5P00931 707 aaKnown RBP6.65□□□□□ -1.34
SRP1YNL189W PCS60P38137 543 aaKnown RBP RIP-Chip data6.65□□□□□ -1.35not detected
SRP1YNL189W ABP1P15891 592 aaKnown RBP6.64□□□□□ -1.35
SRP1YNL189W MAK21Q12176 1025 aaKnown RBP6.63□□□□□ -1.35
SRP1YNL189W LDB19Q12502 818 aa6.63□□□□□ -1.35
SRP1YNL189W YEL023CP39992 682 aa6.62□□□□□ -1.35
SRP1YNL189W GLC3P32775 704 aa6.61□□□□□ -1.35
SRP1YNL189W MPH3P0CE00 602 aa6.61□□□□□ -1.35
SRP1YNL189W RAD54P32863 898 aa6.61□□□□□ -1.35
SRP1YNL189W YNR021WP53723 404 aaKnown RBP6.6□□□□□ -1.35
SRP1YNL189W FKH1P40466 484 aa6.59□□□□□ -1.35
SRP1YNL189W AI4P03878 556 aa6.58□□□□□ -1.36
SRP1YNL189W KIC1P38692 1080 aa6.58□□□□□ -1.36
SRP1YNL189W AIR2Q12476 344 aaKnown RBP6.58□□□□□ -1.36
SRP1YNL189W DAN4P47179 1161 aa6.57□□□□□ -1.36
SRP1YNL189W YNL035CP53962 389 aaKnown RBP6.57□□□□□ -1.36
SRP1YNL189W RTG1P32607 177 aa6.56□□□□□ -1.36
SRP1YNL189W PTC4P38089 393 aa6.56□□□□□ -1.36
SRP1YNL189W KIN1P13185 1064 aa6.55□□□□□ -1.36
SRP1YNL189W SLI15P38283 698 aa6.55□□□□□ -1.36
SRP1YNL189W JIP4Q03361 876 aa6.55□□□□□ -1.36
SRP1YNL189W SEC61P32915 480 aa6.54□□□□□ -1.36
SRP1YNL189W ORC6P38826 435 aa6.54□□□□□ -1.36
SRP1YNL189W YJL171CP46992 396 aa6.54□□□□□ -1.36
SRP1YNL189W NCR1Q12200 1170 aa6.53□□□□□ -1.36
SRP1YNL189W DMA2P53924 522 aa6.52□□□□□ -1.37
SRP1YNL189W MID1P41821 548 aa6.51□□□□□ -1.37
SRP1YNL189W CDC73Q06697 393 aa6.5□□□□□ -1.37
SRP1YNL189W TFG1P41895 735 aaPredicted RBP6.49□□□□□ -1.37
SRP1YNL189W ATF2P53296 535 aa6.49□□□□□ -1.37
SRP1YNL189W PML39Q03760 334 aa6.49□□□□□ -1.37
SRP1YNL189W AIM7Q12156 149 aa6.49□□□□□ -1.37
SRP1YNL189W PSE1P32337 1089 aaKnown RBP6.47□□□□□ -1.37
SRP1YNL189W TAF7Q05021 590 aa6.47□□□□□ -1.37
SRP1YNL189W BMT6Q12291 365 aa6.47□□□□□ -1.37
SRP1YNL189W GAP1P19145 602 aaPredicted RBP6.46□□□□□ -1.38
SRP1YNL189W RGR1P19263 1082 aa6.46□□□□□ -1.38
SRP1YNL189W MVP1P40959 511 aaKnown RBP6.45□□□□□ -1.38
SRP1YNL189W GUA1P38625 525 aaKnown RBP6.44□□□□□ -1.38
SRP1YNL189W MPC54Q08550 464 aa6.43□□□□□ -1.38
SRP1YNL189W YDL129WQ07555 291 aa6.42□□□□□ -1.38
SRP1YNL189W PEX29Q03370 554 aa6.41□□□□□ -1.38
SRP1YNL189W YDR344CQ05510 147 aa6.41□□□□□ -1.38
SRP1YNL189W DPL1Q05567 589 aa6.4□□□□□ -1.38
SRP1YNL189W YPR109WQ06104 294 aa6.4□□□□□ -1.38
SRP1YNL189W TEA1P47988 759 aa6.39□□□□□ -1.39
SRP1YNL189W CSC1Q06538 782 aa6.39□□□□□ -1.39
SRP1YNL189W SAP30P38429 201 aa6.39□□□□□ -1.39
SRP1YNL189W NMA111P53920 997 aa6.36□□□□□ -1.39
SRP1YNL189W TUM1Q08686 304 aaKnown RBP6.36□□□□□ -1.39
SRP1YNL189W KTR1P27810 393 aaKnown RBP6.36□□□□□ -1.39
SRP1YNL189W PEX21P50091 288 aa6.36□□□□□ -1.39
SRP1YNL189W NIS1P53939 407 aa6.36□□□□□ -1.39
SRP1YNL189W TYW1Q08960 810 aaKnown RBP6.36□□□□□ -1.39
SRP1YNL189W TFB4Q12004 338 aa6.36□□□□□ -1.39
SRP1YNL189W YRR1Q12172 810 aa6.36□□□□□ -1.39
SRP1YNL189W RPP1BP10622 106 aaKnown RBP6.35□□□□□ -1.39
SRP1YNL189W CSN12P47130 423 aa6.33□□□□□ -1.4
SRP1YNL189W ISU2Q12056 156 aa6.33□□□□□ -1.4
SRP1YNL189W PDR1P12383 1068 aa6.32□□□□□ -1.4
SRP1YNL189W SCJ1P25303 377 aa6.32□□□□□ -1.4
SRP1YNL189W FPK1P53739 893 aa6.32□□□□□ -1.4
SRP1YNL189W TFB3Q03290 321 aa6.32□□□□□ -1.4
SRP1YNL189W CLB5P30283 435 aa6.31□□□□□ -1.4
SRP1YNL189W PKC1P24583 1151 aa6.3□□□□□ -1.4
SRP1YNL189W CHL1P22516 861 aaPredicted RBP6.29□□□□□ -1.4
SRP1YNL189W HPC2Q01448 625 aa6.29□□□□□ -1.4
SRP1YNL189W PRE3P38624 215 aa6.28□□□□□ -1.4
SRP1YNL189W ARH1P48360 493 aa6.28□□□□□ -1.4
SRP1YNL189W HAP5Q02516 242 aa6.28□□□□□ -1.4
SRP1YNL189W SIT4P20604 311 aa6.27□□□□□ -1.41
SRP1YNL189W ESS1P22696 170 aa6.27□□□□□ -1.41
SRP1YNL189W YMR196WQ04336 1088 aa6.27□□□□□ -1.41
SRP1YNL189W ERF2Q06551 359 aa6.27□□□□□ -1.41
SRP1YNL189W HST2P53686 357 aa6.26□□□□□ -1.41
SRP1YNL189W NUD1P32336 851 aa6.25□□□□□ -1.41
SRP1YNL189W ELP4Q02884 456 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms