RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W HTA1P04911 132 aaKnown RBP3.91□□□□□ -1.78
HSH155YMR288W HTA2P04912 132 aa3.91□□□□□ -1.78
HSH155YMR288W MGA2P40578 1113 aa3.91□□□□□ -1.78
HSH155YMR288W VPS29P38759 282 aa3.91□□□□□ -1.78
HSH155YMR288W YDL129WQ07555 291 aa3.91□□□□□ -1.78
HSH155YMR288W SAM3Q08986 587 aa3.91□□□□□ -1.78
HSH155YMR288W CHL1P22516 861 aaPredicted RBP3.9□□□□□ -1.78
HSH155YMR288W DCW1P36091 449 aa3.9□□□□□ -1.78
HSH155YMR288W STS1P38637 319 aa3.89□□□□□ -1.79
HSH155YMR288W CST9Q06032 482 aa3.89□□□□□ -1.79
HSH155YMR288W PRE3P38624 215 aa3.87□□□□□ -1.79
HSH155YMR288W ELP4Q02884 456 aaKnown RBP3.86□□□□□ -1.79
HSH155YMR288W YEL023CP39992 682 aa3.85□□□□□ -1.79
HSH155YMR288W PTC4P38089 393 aa3.84□□□□□ -1.79
HSH155YMR288W ECM5Q03214 1411 aa3.84□□□□□ -1.79
HSH155YMR288W DAN4P47179 1161 aa3.83□□□□□ -1.8
HSH155YMR288W VRP1P37370 817 aa3.82□□□□□ -1.8
HSH155YMR288W GRE2Q12068 342 aaKnown RBP3.82□□□□□ -1.8
HSH155YMR288W RCR1P38212 213 aa3.81□□□□□ -1.8
HSH155YMR288W PEX29Q03370 554 aa3.81□□□□□ -1.8
HSH155YMR288W ATH1P48016 1211 aa3.8□□□□□ -1.8
HSH155YMR288W PML39Q03760 334 aa3.79□□□□□ -1.8
HSH155YMR288W XDJ1P39102 459 aa3.79□□□□□ -1.8
HSH155YMR288W REV3P14284 1504 aa3.78□□□□□ -1.8
HSH155YMR288W DMA1P38823 416 aa3.78□□□□□ -1.8
HSH155YMR288W MDS3P53094 1487 aa3.78□□□□□ -1.81
HSH155YMR288W THO2P53552 1597 aaKnown RBP3.77□□□□□ -1.81
HSH155YMR288W DPS1P04802 557 aaKnown RBP3.77□□□□□ -1.81
HSH155YMR288W HSL1P34244 1518 aa3.75□□□□□ -1.81
HSH155YMR288W SPT6P23615 1451 aaKnown RBP3.75□□□□□ -1.81
HSH155YMR288W GUT1P32190 709 aa3.74□□□□□ -1.81
HSH155YMR288W BUD4P47136 1447 aa3.72□□□□□ -1.81
HSH155YMR288W SPT23P35210 1082 aa3.71□□□□□ -1.81
HSH155YMR288W ARH1P48360 493 aa3.71□□□□□ -1.82
HSH155YMR288W BPT1P14772 1559 aa3.71□□□□□ -1.82
HSH155YMR288W PTC3P34221 468 aaKnown RBP3.7□□□□□ -1.82
HSH155YMR288W MAK11P20484 414 aaKnown RBP3.7□□□□□ -1.82
HSH155YMR288W MID1P41821 548 aa3.69□□□□□ -1.82
HSH155YMR288W PTC2P39966 464 aaKnown RBP3.68□□□□□ -1.82
HSH155YMR288W HAP5Q02516 242 aa3.68□□□□□ -1.82
HSH155YMR288W YDR344CQ05510 147 aa3.67□□□□□ -1.82
HSH155YMR288W COQ8P27697 501 aa3.66□□□□□ -1.82
HSH155YMR288W PEP1P32319 1579 aa3.66□□□□□ -1.82
HSH155YMR288W RAM2P29703 316 aa3.65□□□□□ -1.83
HSH155YMR288W EDS1P38073 919 aa3.65□□□□□ -1.83
HSH155YMR288W HIR3P47171 1648 aa3.65□□□□□ -1.83
HSH155YMR288W BNI1P41832 1953 aa3.64□□□□□ -1.83
HSH155YMR288W MPH3P0CE00 602 aa3.64□□□□□ -1.83
HSH155YMR288W SSK2P53599 1579 aa3.64□□□□□ -1.83
HSH155YMR288W AI4P03878 556 aa3.64□□□□□ -1.83
HSH155YMR288W BNI4P53858 892 aa3.64□□□□□ -1.83
HSH155YMR288W TAF2P23255 1407 aa3.63□□□□□ -1.83
HSH155YMR288W YCF1P39109 1515 aaKnown RBP3.62□□□□□ -1.83
HSH155YMR288W SET1P38827 1080 aaKnown RBP3.61□□□□□ -1.83
HSH155YMR288W IFH1P39520 1085 aa3.61□□□□□ -1.83
HSH155YMR288W MPC54Q08550 464 aa3.6□□□□□ -1.83
HSH155YMR288W YML082WQ04533 649 aaKnown RBP3.6□□□□□ -1.83
HSH155YMR288W NMA111P53920 997 aa3.59□□□□□ -1.83
HSH155YMR288W GYP1Q08484 637 aa3.59□□□□□ -1.83
HSH155YMR288W ATG2P53855 1592 aa3.59□□□□□ -1.83
HSH155YMR288W SGS1P35187 1447 aa3.59□□□□□ -1.84
HSH155YMR288W YGR273CP53329 174 aa3.58□□□□□ -1.84
HSH155YMR288W DPL1Q05567 589 aa3.58□□□□□ -1.84
HSH155YMR288W MYO2P19524 1574 aaKnown RBP3.58□□□□□ -1.84
HSH155YMR288W IRC20Q06554 1556 aa3.58□□□□□ -1.84
HSH155YMR288W SOL3P38858 249 aa3.57□□□□□ -1.84
HSH155YMR288W RPA190P10964 1664 aaKnown RBP3.57□□□□□ -1.84
HSH155YMR288W ITT1Q04638 464 aa3.57□□□□□ -1.84
HSH155YMR288W NOP53Q12080 455 aaKnown RBP3.57□□□□□ -1.84
HSH155YMR288W RPP1BP10622 106 aaKnown RBP3.56□□□□□ -1.84
HSH155YMR288W ILV3P39522 585 aaKnown RBP3.56□□□□□ -1.84
HSH155YMR288W VPS70P47161 811 aa3.56□□□□□ -1.84
HSH155YMR288W CDC25P04821 1589 aa3.56□□□□□ -1.84
HSH155YMR288W NST1P53935 1240 aa3.56□□□□□ -1.84
HSH155YMR288W SIN3P22579 1536 aa3.55□□□□□ -1.84
HSH155YMR288W CKB1P43639 278 aa3.54□□□□□ -1.84
HSH155YMR288W ISU2Q12056 156 aa3.54□□□□□ -1.84
HSH155YMR288W ESC1Q03661 1658 aaKnown RBP3.54□□□□□ -1.84
HSH155YMR288W TRK1P12685 1235 aa3.54□□□□□ -1.84
HSH155YMR288W SPB4P25808 606 aaPredicted RBP3.54□□□□□ -1.84
HSH155YMR288W SLI15P38283 698 aa3.54□□□□□ -1.84
HSH155YMR288W SRC1Q03707 834 aa3.53□□□□□ -1.84
HSH155YMR288W YEL077CQ3E7X8 1277 aa3.53□□□□□ -1.84
HSH155YMR288W MMS1Q06211 1407 aa3.53□□□□□ -1.84
HSH155YMR288W RAS1P01119 309 aa3.52□□□□□ -1.85
HSH155YMR288W GBP2P25555 427 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
HSH155YMR288W XRN1P22147 1528 aaKnown RBP3.52□□□□□ -1.85
HSH155YMR288W LTE1P07866 1435 aa3.52□□□□□ -1.85
HSH155YMR288W SAS10Q12136 610 aaPredicted RBP3.52□□□□□ -1.85
HSH155YMR288W DNF1P32660 1571 aa3.51□□□□□ -1.85
HSH155YMR288W AMS1P22855 1083 aa3.51□□□□□ -1.85
HSH155YMR288W RGA1P39083 1007 aa3.5□□□□□ -1.85
HSH155YMR288W SAS4Q04003 481 aa3.5□□□□□ -1.85
HSH155YMR288W KEX1P09620 729 aa3.5□□□□□ -1.85
HSH155YMR288W YPR148CQ06523 435 aa3.5□□□□□ -1.85
HSH155YMR288W MRF1P30775 413 aaPredicted RBP3.49□□□□□ -1.85
HSH155YMR288W KIC1P38692 1080 aa3.49□□□□□ -1.85
HSH155YMR288W PEX21P50091 288 aa3.49□□□□□ -1.85
HSH155YMR288W REF2P42073 533 aaPredicted RBP3.49□□□□□ -1.85
HSH155YMR288W SKI3P17883 1432 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms