RNA–Protein interactions for RNA: YMR110C

HFD1, Transcript of Hexadecenal dehydrogenase, yeastyeast

Gene HFD1, Length 1,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFD1YMR110C RCR1P38212 213 aa8.04□□□□□ -1.12
HFD1YMR110C DCW1P36091 449 aa8.01□□□□□ -1.13
HFD1YMR110C PRE3P38624 215 aa8.01□□□□□ -1.13
HFD1YMR110C PTC4P38089 393 aa8.01□□□□□ -1.13
HFD1YMR110C YEL023CP39992 682 aa7.99□□□□□ -1.13
HFD1YMR110C VRP1P37370 817 aa7.87□□□□□ -1.15
HFD1YMR110C XDJ1P39102 459 aa7.86□□□□□ -1.15
HFD1YMR110C GRE2Q12068 342 aaKnown RBP7.86□□□□□ -1.15
HFD1YMR110C PML39Q03760 334 aa7.84□□□□□ -1.15
HFD1YMR110C ELP4Q02884 456 aaKnown RBP7.84□□□□□ -1.15
HFD1YMR110C YDR344CQ05510 147 aa7.8□□□□□ -1.16
HFD1YMR110C ATH1P48016 1211 aa7.78□□□□□ -1.16
HFD1YMR110C MIF2P35201 549 aa7.77□□□□□ -1.17
HFD1YMR110C GUT1P32190 709 aa7.76□□□□□ -1.17
HFD1YMR110C ARH1P48360 493 aa7.74□□□□□ -1.17
HFD1YMR110C DPS1P04802 557 aaKnown RBP7.73□□□□□ -1.17
HFD1YMR110C MON2P48563 1636 aaPredicted RBP7.72□□□□□ -1.17
HFD1YMR110C MAK11P20484 414 aaKnown RBP7.72□□□□□ -1.17
HFD1YMR110C PTC3P34221 468 aaKnown RBP7.72□□□□□ -1.17
HFD1YMR110C MID1P41821 548 aa7.7□□□□□ -1.18
HFD1YMR110C EDS1P38073 919 aa7.69□□□□□ -1.18
HFD1YMR110C PEX29Q03370 554 aa7.67□□□□□ -1.18
HFD1YMR110C SPT23P35210 1082 aa7.67□□□□□ -1.18
HFD1YMR110C NST1P53935 1240 aa7.66□□□□□ -1.18
HFD1YMR110C RAM2P29703 316 aa7.65□□□□□ -1.18
HFD1YMR110C INO80P53115 1489 aa7.62□□□□□ -1.19
HFD1YMR110C AI4P03878 556 aa7.62□□□□□ -1.19
HFD1YMR110C MPH3P0CE00 602 aa7.62□□□□□ -1.19
HFD1YMR110C COQ8P27697 501 aa7.61□□□□□ -1.19
HFD1YMR110C SOL3P38858 249 aa7.61□□□□□ -1.19
HFD1YMR110C HAP5Q02516 242 aa7.6□□□□□ -1.19
HFD1YMR110C BNI4P53858 892 aa7.56□□□□□ -1.2
HFD1YMR110C PTC2P39966 464 aaKnown RBP7.54□□□□□ -1.2
HFD1YMR110C YML082WQ04533 649 aaKnown RBP7.54□□□□□ -1.2
HFD1YMR110C ILV3P39522 585 aaKnown RBP7.53□□□□□ -1.2
HFD1YMR110C SRC1Q03707 834 aa7.5□□□□□ -1.21
HFD1YMR110C MPC54Q08550 464 aa7.5□□□□□ -1.21
HFD1YMR110C YGR273CP53329 174 aa7.49□□□□□ -1.21
HFD1YMR110C NOP53Q12080 455 aaKnown RBP7.48□□□□□ -1.21
HFD1YMR110C NMA111P53920 997 aa7.46□□□□□ -1.22
HFD1YMR110C SLI15P38283 698 aa7.42□□□□□ -1.22
HFD1YMR110C DPL1Q05567 589 aa7.42□□□□□ -1.22
HFD1YMR110C RGA2Q06407 1009 aa7.42□□□□□ -1.22
HFD1YMR110C RAS1P01119 309 aa7.37□□□□□ -1.23
HFD1YMR110C RGA1P39083 1007 aa7.37□□□□□ -1.23
HFD1YMR110C ISU2Q12056 156 aa7.33□□□□□ -1.24
HFD1YMR110C YPR015CQ12531 247 aa7.33□□□□□ -1.24
HFD1YMR110C DNA2P38859 1522 aa7.32□□□□□ -1.24
HFD1YMR110C SWR1Q05471 1514 aa7.32□□□□□ -1.24
HFD1YMR110C GYP1Q08484 637 aa7.31□□□□□ -1.24
HFD1YMR110C KEX1P09620 729 aa7.3□□□□□ -1.24
HFD1YMR110C RAM1P22007 431 aa7.3□□□□□ -1.24
HFD1YMR110C AMS1P22855 1083 aa7.28□□□□□ -1.24
HFD1YMR110C TY1B-DR4Q07793 1604 aa7.27□□□□□ -1.25
HFD1YMR110C TRK1P12685 1235 aa7.26□□□□□ -1.25
HFD1YMR110C CDC73Q06697 393 aa7.25□□□□□ -1.25
HFD1YMR110C SAS4Q04003 481 aa7.23□□□□□ -1.25
HFD1YMR110C PDR1P12383 1068 aa7.2□□□□□ -1.26
HFD1YMR110C TCB3Q03640 1545 aaKnown RBP7.2□□□□□ -1.26
HFD1YMR110C KOG1P38873 1557 aa7.2□□□□□ -1.26
HFD1YMR110C YLR326WQ06170 240 aaKnown RBP7.18□□□□□ -1.26
HFD1YMR110C RPP1BP10622 106 aaKnown RBP7.17□□□□□ -1.26
HFD1YMR110C UBP14P38237 781 aaKnown RBP7.16□□□□□ -1.26
HFD1YMR110C YEL077CQ3E7X8 1277 aa7.16□□□□□ -1.26
HFD1YMR110C SDH2P21801 266 aa7.16□□□□□ -1.26
HFD1YMR110C VHR2P40041 505 aa7.16□□□□□ -1.26
HFD1YMR110C MRF1P30775 413 aaPredicted RBP7.13□□□□□ -1.27
HFD1YMR110C RAD54P32863 898 aa7.13□□□□□ -1.27
HFD1YMR110C PCS60P38137 543 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
HFD1YMR110C SET1P38827 1080 aaKnown RBP7.13□□□□□ -1.27
HFD1YMR110C PRT1P06103 763 aaKnown RBP7.06□□□□□ -1.28
HFD1YMR110C BUD20Q08004 166 aaPredicted RBP7.06□□□□□ -1.28
HFD1YMR110C PEX21P50091 288 aa7.05□□□□□ -1.28
HFD1YMR110C YPL062WQ02781 134 aa7.04□□□□□ -1.28
HFD1YMR110C YRR1Q12172 810 aa7.04□□□□□ -1.28
HFD1YMR110C SGS1P35187 1447 aa7.03□□□□□ -1.28
HFD1YMR110C ERG12P07277 443 aa7.03□□□□□ -1.28
HFD1YMR110C KIC1P38692 1080 aa7.02□□□□□ -1.29
HFD1YMR110C BRE2P43132 505 aa6.99□□□□□ -1.29
HFD1YMR110C STR2P47164 639 aa6.99□□□□□ -1.29
HFD1YMR110C GCR2Q01722 534 aa6.99□□□□□ -1.29
HFD1YMR110C YDR090CQ03193 310 aa6.99□□□□□ -1.29
HFD1YMR110C ISM1P48526 1002 aa6.98□□□□□ -1.29
HFD1YMR110C CSC1Q06538 782 aa6.98□□□□□ -1.29
HFD1YMR110C TFB4Q12004 338 aa6.98□□□□□ -1.29
HFD1YMR110C HSL1P34244 1518 aa6.98□□□□□ -1.29
HFD1YMR110C NUD1P32336 851 aa6.96□□□□□ -1.29
HFD1YMR110C GAP1P19145 602 aaPredicted RBP6.95□□□□□ -1.3
HFD1YMR110C NPL4P33755 580 aa6.95□□□□□ -1.3
HFD1YMR110C IFH1P39520 1085 aa6.95□□□□□ -1.3
HFD1YMR110C AIR1P40507 360 aaKnown RBP6.95□□□□□ -1.3
HFD1YMR110C TUM1Q08686 304 aaKnown RBP6.95□□□□□ -1.3
HFD1YMR110C GBP2P25555 427 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
HFD1YMR110C SPT6P23615 1451 aaKnown RBP6.94□□□□□ -1.3
HFD1YMR110C GAR1P28007 205 aaKnown RBP6.94□□□□□ -1.3
HFD1YMR110C CST6P40535 587 aa6.94□□□□□ -1.3
HFD1YMR110C SPT16P32558 1035 aaKnown RBP6.92□□□□□ -1.3
HFD1YMR110C GCD11P32481 527 aaKnown RBP6.91□□□□□ -1.3
HFD1YMR110C CLA4P48562 842 aa6.91□□□□□ -1.3
HFD1YMR110C LAM6Q08001 693 aa6.9□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms