RNA–Protein interactions for RNA: YML030W

RCF1, Transcript of Cytochrome c oxidase subunit, yeastyeast

Gene RCF1, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCF1YML030W TY1B-NL1Q12112 1755 aa11.49□□□□□ -0.57
RCF1YML030W TY1B-GR1Q12141 1755 aa11.49□□□□□ -0.57
RCF1YML030W TY1B-BLQ12490 1755 aa11.49□□□□□ -0.57
RCF1YML030W GEA1P47102 1408 aaPredicted RBP11.46□□□□□ -0.57
RCF1YML030W SNT2P53127 1403 aa11.45□□□□□ -0.58
RCF1YML030W IFH1P39520 1085 aa11.44□□□□□ -0.58
RCF1YML030W RPO21P04050 1733 aaKnown RBP11.43□□□□□ -0.58
RCF1YML030W GEA2P39993 1459 aaKnown RBP11.42□□□□□ -0.58
RCF1YML030W IKI3Q06706 1349 aaKnown RBP11.4□□□□□ -0.58
RCF1YML030W NUP159P40477 1460 aa11.39□□□□□ -0.59
RCF1YML030W RTT106P40161 455 aa11.38□□□□□ -0.59
RCF1YML030W MET5P47169 1442 aa11.35□□□□□ -0.59
RCF1YML030W NUP170P38181 1502 aa11.34□□□□□ -0.59
RCF1YML030W IRC20Q06554 1556 aa11.33□□□□□ -0.6
RCF1YML030W TY3B-GQ99315 1547 aa11.31□□□□□ -0.6
RCF1YML030W CAT8P39113 1433 aa11.31□□□□□ -0.6
RCF1YML030W VPS15P22219 1454 aa11.29□□□□□ -0.6
RCF1YML030W YBT1P32386 1661 aa11.28□□□□□ -0.6
RCF1YML030W PDR12Q02785 1511 aa11.25□□□□□ -0.61
RCF1YML030W GDB1Q06625 1536 aa11.22□□□□□ -0.61
RCF1YML030W SSM4P40318 1319 aa11.2□□□□□ -0.62
RCF1YML030W MET10P39692 1035 aa11.2□□□□□ -0.62
RCF1YML030W YRF1-1P0CX20 1796 aa11.2□□□□□ -0.62
RCF1YML030W YRF1-5P0CX21 1796 aa11.2□□□□□ -0.62
RCF1YML030W YRF1-8P0CX22 1796 aa11.2□□□□□ -0.62
RCF1YML030W SPO14P36126 1683 aa11.2□□□□□ -0.62
RCF1YML030W PDR10P51533 1564 aa11.19□□□□□ -0.62
RCF1YML030W ARO1P08566 1588 aaKnown RBP11.18□□□□□ -0.62
RCF1YML030W NUP157P40064 1391 aaKnown RBP11.17□□□□□ -0.62
RCF1YML030W SRB8P25648 1427 aa11.14□□□□□ -0.63
RCF1YML030W LTE1P07866 1435 aa11.12□□□□□ -0.63
RCF1YML030W IQG1Q12280 1495 aa11.09□□□□□ -0.63
RCF1YML030W BUD3P25558 1636 aa11.08□□□□□ -0.64
RCF1YML030W CKB1P43639 278 aa11.07□□□□□ -0.64
RCF1YML030W MMS1Q06211 1407 aa11.03□□□□□ -0.64
RCF1YML030W TRM3Q07527 1436 aa11□□□□□ -0.65
RCF1YML030W DRS2P39524 1355 aa10.99□□□□□ -0.65
RCF1YML030W YSP2Q06681 1438 aa10.98□□□□□ -0.65
RCF1YML030W GCN2P15442 1659 aa10.96□□□□□ -0.65
RCF1YML030W DOP1Q03921 1698 aa10.95□□□□□ -0.66
RCF1YML030W BUD21Q08492 214 aaPredicted RBP10.95□□□□□ -0.66
RCF1YML030W CHC1P22137 1653 aaKnown RBP10.92□□□□□ -0.66
RCF1YML030W BNR1P40450 1375 aa10.91□□□□□ -0.66
RCF1YML030W SEC7P11075 2009 aaKnown RBP10.85□□□□□ -0.67
RCF1YML030W YOR093CQ12275 1648 aa10.84□□□□□ -0.67
RCF1YML030W NOP7P53261 605 aaKnown RBP10.82□□□□□ -0.68
RCF1YML030W PDR5P33302 1511 aaKnown RBP10.8□□□□□ -0.68
RCF1YML030W PAF1P38351 445 aa10.8□□□□□ -0.68
RCF1YML030W DNF2Q12675 1612 aa10.77□□□□□ -0.68
RCF1YML030W BNI1P41832 1953 aa10.77□□□□□ -0.69
RCF1YML030W ITT1Q04638 464 aa10.75□□□□□ -0.69
RCF1YML030W NUP188P52593 1655 aaKnown RBP10.74□□□□□ -0.69
RCF1YML030W VMR1P38735 1592 aa10.72□□□□□ -0.69
RCF1YML030W POL5P39985 1022 aaKnown RBP10.71□□□□□ -0.69
RCF1YML030W IML1P47170 1584 aa10.71□□□□□ -0.69
RCF1YML030W BFR2Q06631 534 aaKnown RBP10.69□□□□□ -0.7
RCF1YML030W RAV1P47104 1357 aa10.67□□□□□ -0.7
RCF1YML030W URN1Q06525 465 aaKnown RBP10.64□□□□□ -0.71
RCF1YML030W RTC1Q08281 1341 aa10.6□□□□□ -0.71
RCF1YML030W PDR11P40550 1411 aa10.58□□□□□ -0.72
RCF1YML030W IPL1P38991 367 aa10.53□□□□□ -0.72
RCF1YML030W SEC3P33332 1336 aaKnown RBP10.53□□□□□ -0.72
RCF1YML030W YAP3P38749 330 aa10.52□□□□□ -0.73
RCF1YML030W TY3B-IQ7LHG5 1498 aaKnown RBP10.51□□□□□ -0.73
RCF1YML030W HAP1P0CE41 1502 aa10.51□□□□□ -0.73
RCF1YML030W DNF3Q12674 1656 aa10.5□□□□□ -0.73
RCF1YML030W MHP1P43638 1398 aa10.5□□□□□ -0.73
RCF1YML030W ESL2P36168 1195 aa10.49□□□□□ -0.73
RCF1YML030W SCT1P32784 759 aa10.48□□□□□ -0.73
RCF1YML030W TYS1P36421 394 aaKnown RBP10.48□□□□□ -0.73
RCF1YML030W TAF5P38129 798 aa10.48□□□□□ -0.73
RCF1YML030W NUP192P47054 1683 aa10.47□□□□□ -0.73
RCF1YML030W YLR419WQ06698 1435 aaKnown RBP10.44□□□□□ -0.74
RCF1YML030W ORC1P54784 914 aaPredicted RBP10.43□□□□□ -0.74
RCF1YML030W NAP1P25293 417 aaKnown RBP10.41□□□□□ -0.74
RCF1YML030W KIP3P53086 805 aaKnown RBP10.41□□□□□ -0.74
RCF1YML030W BCK1Q01389 1478 aa10.4□□□□□ -0.74
RCF1YML030W ABP1P15891 592 aaKnown RBP10.39□□□□□ -0.75
RCF1YML030W SPT7P35177 1332 aa10.36□□□□□ -0.75
RCF1YML030W ENP1P38333 483 aaKnown RBP10.36□□□□□ -0.75
RCF1YML030W RAD9P14737 1309 aa10.35□□□□□ -0.75
RCF1YML030W SPE2P21182 396 aa10.35□□□□□ -0.75
RCF1YML030W ALD4P46367 519 aaKnown RBP10.34□□□□□ -0.75
RCF1YML030W MRX12P47084 519 aa10.33□□□□□ -0.76
RCF1YML030W TAF8Q03750 510 aa10.33□□□□□ -0.76
RCF1YML030W CAB1Q04430 367 aa10.31□□□□□ -0.76
RCF1YML030W KRE5P22023 1365 aa10.3□□□□□ -0.76
RCF1YML030W MAK10Q02197 733 aa10.3□□□□□ -0.76
RCF1YML030W PDS5Q04264 1277 aa10.3□□□□□ -0.76
RCF1YML030W NSR1P27476 414 aaKnown RBP RIP-Chip data10.27□□□□□ -0.77 RIP-Chip
RCF1YML030W LEU3P08638 886 aa10.26□□□□□ -0.77
RCF1YML030W CFT1Q06632 1357 aaKnown RBP10.26□□□□□ -0.77
RCF1YML030W TY1B-NL2Q99337 1749 aaKnown RBP10.25□□□□□ -0.77
RCF1YML030W PSD2P53037 1138 aaKnown RBP10.25□□□□□ -0.77
RCF1YML030W RIA1P53893 1110 aa10.25□□□□□ -0.77
RCF1YML030W CHZ1P40019 153 aaPredicted RBP10.21□□□□□ -0.77
RCF1YML030W MLP1Q02455 1875 aaKnown RBP10.2□□□□□ -0.78
RCF1YML030W USO1P25386 1790 aa10.17□□□□□ -0.78
RCF1YML030W PSK1P31374 1356 aa10.16□□□□□ -0.78
RCF1YML030W RCM1P53972 490 aa10.15□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 121.9 ms