RNA–Protein interactions for RNA: YLR338W

OPI9, Transcript of Dubious open reading frame, yeastyeast

Gene OPI9, Length 858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OPI9YLR338W RPA190P10964 1664 aaKnown RBP20.65■□□□□ 0.9
OPI9YLR338W ULS1Q08562 1619 aa20.64■□□□□ 0.9
OPI9YLR338W IFH1P39520 1085 aa20.63■□□□□ 0.89
OPI9YLR338W SNT2P53127 1403 aa20.61■□□□□ 0.89
OPI9YLR338W GEA1P47102 1408 aaPredicted RBP20.54■□□□□ 0.88
OPI9YLR338W NTE1Q04958 1679 aa20.54■□□□□ 0.88
OPI9YLR338W RPO21P04050 1733 aaKnown RBP20.47■□□□□ 0.87
OPI9YLR338W RTT106P40161 455 aa20.47■□□□□ 0.87
OPI9YLR338W IKI3Q06706 1349 aaKnown RBP20.45■□□□□ 0.86
OPI9YLR338W NUP159P40477 1460 aa20.43■□□□□ 0.86
OPI9YLR338W GEA2P39993 1459 aaKnown RBP20.4■□□□□ 0.86
OPI9YLR338W MET5P47169 1442 aa20.36■□□□□ 0.85
OPI9YLR338W TY3B-GQ99315 1547 aa20.3■□□□□ 0.84
OPI9YLR338W IRC20Q06554 1556 aa20.29■□□□□ 0.84
OPI9YLR338W VPS15P22219 1454 aa20.28■□□□□ 0.84
OPI9YLR338W NUP170P38181 1502 aa20.25■□□□□ 0.83
OPI9YLR338W YRF1-1P0CX20 1796 aa20.22■□□□□ 0.83
OPI9YLR338W YRF1-5P0CX21 1796 aa20.22■□□□□ 0.83
OPI9YLR338W YRF1-8P0CX22 1796 aa20.22■□□□□ 0.83
OPI9YLR338W CAT8P39113 1433 aa20.21■□□□□ 0.83
OPI9YLR338W MET10P39692 1035 aa20.2■□□□□ 0.82
OPI9YLR338W YBT1P32386 1661 aa20.19■□□□□ 0.82
OPI9YLR338W SSM4P40318 1319 aa20.16■□□□□ 0.82
OPI9YLR338W PDR12Q02785 1511 aa20.13■□□□□ 0.81
OPI9YLR338W SPO14P36126 1683 aa20.11■□□□□ 0.81
OPI9YLR338W GDB1Q06625 1536 aa20.07■□□□□ 0.8
OPI9YLR338W PDR10P51533 1564 aa20.06■□□□□ 0.8
OPI9YLR338W NUP157P40064 1391 aaKnown RBP20.06■□□□□ 0.8
OPI9YLR338W ARO1P08566 1588 aaKnown RBP19.97■□□□□ 0.79
OPI9YLR338W CKB1P43639 278 aa19.96■□□□□ 0.79
OPI9YLR338W SRB8P25648 1427 aa19.93■□□□□ 0.78
OPI9YLR338W LTE1P07866 1435 aa19.9■□□□□ 0.78
OPI9YLR338W IQG1Q12280 1495 aa19.85■□□□□ 0.77
OPI9YLR338W BUD3P25558 1636 aa19.83■□□□□ 0.76
OPI9YLR338W YSP2Q06681 1438 aa19.77■□□□□ 0.76
OPI9YLR338W BUD21Q08492 214 aaPredicted RBP19.72■□□□□ 0.75
OPI9YLR338W MMS1Q06211 1407 aa19.71■□□□□ 0.75
OPI9YLR338W DRS2P39524 1355 aa19.68■□□□□ 0.74
OPI9YLR338W BNR1P40450 1375 aa19.62■□□□□ 0.73
OPI9YLR338W SEC7P11075 2009 aaKnown RBP19.6■□□□□ 0.73
OPI9YLR338W GCN2P15442 1659 aa19.59■□□□□ 0.73
OPI9YLR338W TRM3Q07527 1436 aa19.57■□□□□ 0.72
OPI9YLR338W DOP1Q03921 1698 aa19.56■□□□□ 0.72
OPI9YLR338W ITT1Q04638 464 aa19.51■□□□□ 0.71
OPI9YLR338W BNI1P41832 1953 aa19.47■□□□□ 0.71
OPI9YLR338W CHC1P22137 1653 aaKnown RBP19.46■□□□□ 0.71
OPI9YLR338W NOP7P53261 605 aaKnown RBP19.35■□□□□ 0.69
OPI9YLR338W YOR093CQ12275 1648 aa19.34■□□□□ 0.69
OPI9YLR338W PAF1P38351 445 aa19.33■□□□□ 0.68
OPI9YLR338W PDR5P33302 1511 aaKnown RBP19.28■□□□□ 0.68
OPI9YLR338W NUP188P52593 1655 aaKnown RBP19.21■□□□□ 0.67
OPI9YLR338W VMR1P38735 1592 aa19.2■□□□□ 0.66
OPI9YLR338W BFR2Q06631 534 aaKnown RBP19.2■□□□□ 0.66
OPI9YLR338W POL5P39985 1022 aaKnown RBP19.18■□□□□ 0.66
OPI9YLR338W DNF2Q12675 1612 aa19.16■□□□□ 0.66
OPI9YLR338W IML1P47170 1584 aa19.15■□□□□ 0.66
OPI9YLR338W URN1Q06525 465 aaKnown RBP19.13■□□□□ 0.65
OPI9YLR338W PDR11P40550 1411 aa19.11■□□□□ 0.65
OPI9YLR338W RAV1P47104 1357 aa19.11■□□□□ 0.65
OPI9YLR338W RTC1Q08281 1341 aa19.04■□□□□ 0.64
OPI9YLR338W IPL1P38991 367 aa19.02■□□□□ 0.64
OPI9YLR338W TYS1P36421 394 aaKnown RBP18.98■□□□□ 0.63
OPI9YLR338W YAP3P38749 330 aa18.98■□□□□ 0.63
OPI9YLR338W TAF5P38129 798 aa18.89■□□□□ 0.61
OPI9YLR338W ORC1P54784 914 aaPredicted RBP18.87■□□□□ 0.61
OPI9YLR338W ESL2P36168 1195 aa18.86■□□□□ 0.61
OPI9YLR338W TY3B-IQ7LHG5 1498 aaKnown RBP18.83■□□□□ 0.6
OPI9YLR338W NUP192P47054 1683 aa18.82■□□□□ 0.6
OPI9YLR338W ABP1P15891 592 aaKnown RBP18.8■□□□□ 0.6
OPI9YLR338W DNF3Q12674 1656 aa18.77■□□□□ 0.6
OPI9YLR338W HAP1P0CE41 1502 aa18.75■□□□□ 0.59
OPI9YLR338W KIP3P53086 805 aaKnown RBP18.73■□□□□ 0.59
OPI9YLR338W MHP1P43638 1398 aa18.72■□□□□ 0.59
OPI9YLR338W SEC3P33332 1336 aaKnown RBP18.71■□□□□ 0.59
OPI9YLR338W ALD4P46367 519 aaKnown RBP18.68■□□□□ 0.58
OPI9YLR338W YLR419WQ06698 1435 aaKnown RBP18.66■□□□□ 0.58
OPI9YLR338W RAD9P14737 1309 aa18.66■□□□□ 0.58
OPI9YLR338W BCK1Q01389 1478 aa18.63■□□□□ 0.57
OPI9YLR338W SCT1P32784 759 aa18.62■□□□□ 0.57
OPI9YLR338W SPT7P35177 1332 aa18.62■□□□□ 0.57
OPI9YLR338W SPE2P21182 396 aa18.61■□□□□ 0.57
OPI9YLR338W MAK10Q02197 733 aa18.6■□□□□ 0.57
OPI9YLR338W TAF8Q03750 510 aa18.6■□□□□ 0.57
OPI9YLR338W CAB1Q04430 367 aa18.6■□□□□ 0.57
OPI9YLR338W NAP1P25293 417 aaKnown RBP18.58■□□□□ 0.56
OPI9YLR338W MRX12P47084 519 aa18.57■□□□□ 0.56
OPI9YLR338W PDS5Q04264 1277 aa18.53■□□□□ 0.56
OPI9YLR338W KRE5P22023 1365 aa18.52■□□□□ 0.55
OPI9YLR338W NSR1P27476 414 aaKnown RBP RIP-Chip data18.51■□□□□ 0.55not detected
OPI9YLR338W ENP1P38333 483 aaKnown RBP18.51■□□□□ 0.55
OPI9YLR338W PSD2P53037 1138 aaKnown RBP18.47■□□□□ 0.55
OPI9YLR338W RIA1P53893 1110 aa18.47■□□□□ 0.55
OPI9YLR338W LEU3P08638 886 aa18.44■□□□□ 0.54
OPI9YLR338W CHZ1P40019 153 aaPredicted RBP18.42■□□□□ 0.54
OPI9YLR338W CFT1Q06632 1357 aaKnown RBP18.42■□□□□ 0.54
OPI9YLR338W TY1B-NL2Q99337 1749 aaKnown RBP18.33■□□□□ 0.52
OPI9YLR338W MLP1Q02455 1875 aaKnown RBP18.31■□□□□ 0.52
OPI9YLR338W RTG3P38165 486 aa18.31■□□□□ 0.52
OPI9YLR338W USO1P25386 1790 aa18.31■□□□□ 0.52
OPI9YLR338W FKH1P40466 484 aa18.29■□□□□ 0.52
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms