RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	SOL3	P38858	249 aa		3.8	□□□□□ -1.8
RIC1	YLR039C	ATH1	P48016	1211 aa		3.79	□□□□□ -1.8
RIC1	YLR039C	GRE2	Q12068	342 aa	Known RBP	3.79	□□□□□ -1.8
RIC1	YLR039C	GUA1	P38625	525 aa	Known RBP	3.79	□□□□□ -1.8
RIC1	YLR039C	AIM7	Q12156	149 aa		3.78	□□□□□ -1.8
RIC1	YLR039C	GUT1	P32190	709 aa		3.78	□□□□□ -1.8
RIC1	YLR039C	SAM3	Q08986	587 aa		3.78	□□□□□ -1.8
RIC1	YLR039C	MAK21	Q12176	1025 aa	Known RBP	3.78	□□□□□ -1.8
RIC1	YLR039C	YGR273C	P53329	174 aa		3.77	□□□□□ -1.81
RIC1	YLR039C	MST1	P07236	462 aa		3.77	□□□□□ -1.81
RIC1	YLR039C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	3.76	□□□□□ -1.81	not detected
RIC1	YLR039C	NST1	P53935	1240 aa		3.76	□□□□□ -1.81
RIC1	YLR039C	GYP5	Q12344	894 aa		3.76	□□□□□ -1.81
RIC1	YLR039C	KEX1	P09620	729 aa		3.75	□□□□□ -1.81
RIC1	YLR039C	ATF2	P53296	535 aa		3.75	□□□□□ -1.81
RIC1	YLR039C	DCW1	P36091	449 aa		3.74	□□□□□ -1.81
RIC1	YLR039C	ILV3	P39522	585 aa	Known RBP	3.74	□□□□□ -1.81
RIC1	YLR039C	SET4	P42948	560 aa		3.74	□□□□□ -1.81
RIC1	YLR039C	YOL036W	Q08206	761 aa		3.73	□□□□□ -1.81
RIC1	YLR039C	RLF2	Q12495	606 aa		3.73	□□□□□ -1.81
RIC1	YLR039C	RAD54	P32863	898 aa		3.72	□□□□□ -1.81
RIC1	YLR039C	GTT3	P39996	337 aa		3.72	□□□□□ -1.81
RIC1	YLR039C	KIC1	P38692	1080 aa		3.71	□□□□□ -1.82
RIC1	YLR039C	ORC6	P38826	435 aa		3.71	□□□□□ -1.82
RIC1	YLR039C	TFB3	Q03290	321 aa		3.71	□□□□□ -1.82
RIC1	YLR039C	PKC1	P24583	1151 aa		3.71	□□□□□ -1.82
RIC1	YLR039C	PSE1	P32337	1089 aa	Known RBP	3.69	□□□□□ -1.82
RIC1	YLR039C	KTR1	P27810	393 aa	Known RBP	3.69	□□□□□ -1.82
RIC1	YLR039C	WSC3	Q12215	556 aa		3.69	□□□□□ -1.82
RIC1	YLR039C	HPC2	Q01448	625 aa		3.68	□□□□□ -1.82
RIC1	YLR039C	HTA1	P04911	132 aa	Known RBP	3.68	□□□□□ -1.82
RIC1	YLR039C	HTA2	P04912	132 aa		3.68	□□□□□ -1.82
RIC1	YLR039C	MPH3	P0CE00	602 aa		3.68	□□□□□ -1.82
RIC1	YLR039C	RGR1	P19263	1082 aa		3.67	□□□□□ -1.82
RIC1	YLR039C	SLI15	P38283	698 aa		3.67	□□□□□ -1.82
RIC1	YLR039C	TYW1	Q08960	810 aa	Known RBP	3.67	□□□□□ -1.82
RIC1	YLR039C	AI4	P03878	556 aa		3.67	□□□□□ -1.82
RIC1	YLR039C	YEL023C	P39992	682 aa		3.67	□□□□□ -1.82
RIC1	YLR039C	CSN12	P47130	423 aa		3.67	□□□□□ -1.82
RIC1	YLR039C	MVP1	P40959	511 aa	Known RBP	3.66	□□□□□ -1.82
RIC1	YLR039C	DAN4	P47179	1161 aa		3.66	□□□□□ -1.82
RIC1	YLR039C	TEA1	P47988	759 aa		3.66	□□□□□ -1.82
RIC1	YLR039C	GAP1	P19145	602 aa	Predicted RBP	3.65	□□□□□ -1.82
RIC1	YLR039C	CDC73	Q06697	393 aa		3.65	□□□□□ -1.82
RIC1	YLR039C	YBL029C-A	Q3E756	94 aa		3.65	□□□□□ -1.82
RIC1	YLR039C	GLN1	P32288	370 aa	Known RBP	3.65	□□□□□ -1.83
RIC1	YLR039C	NIS1	P53939	407 aa		3.65	□□□□□ -1.83
RIC1	YLR039C	TRP5	P00931	707 aa	Known RBP	3.64	□□□□□ -1.83
RIC1	YLR039C	MSB4	Q12317	492 aa		3.64	□□□□□ -1.83
RIC1	YLR039C	SCJ1	P25303	377 aa		3.63	□□□□□ -1.83
RIC1	YLR039C	BRL1	P38770	471 aa		3.63	□□□□□ -1.83
RIC1	YLR039C	HGH1	P48362	394 aa	Known RBP	3.63	□□□□□ -1.83
RIC1	YLR039C	BIM1	P40013	344 aa		3.63	□□□□□ -1.83
RIC1	YLR039C	ATG32	P40458	529 aa		3.63	□□□□□ -1.83
RIC1	YLR039C	YPR109W	Q06104	294 aa		3.63	□□□□□ -1.83
RIC1	YLR039C	SSA2	P10592	639 aa	Known RBP	3.62	□□□□□ -1.83
RIC1	YLR039C	YJL007C	P47080	104 aa		3.62	□□□□□ -1.83
RIC1	YLR039C	FPK1	P53739	893 aa		3.62	□□□□□ -1.83
RIC1	YLR039C	MID1	P41821	548 aa		3.62	□□□□□ -1.83
RIC1	YLR039C	VNX1	P42839	908 aa		3.62	□□□□□ -1.83
RIC1	YLR039C	PTC4	P38089	393 aa		3.61	□□□□□ -1.83
RIC1	YLR039C	ERG12	P07277	443 aa		3.61	□□□□□ -1.83
RIC1	YLR039C	ESS1	P22696	170 aa		3.61	□□□□□ -1.83
RIC1	YLR039C	YJU3	P28321	313 aa		3.6	□□□□□ -1.83
RIC1	YLR039C	CSC1	Q06538	782 aa		3.6	□□□□□ -1.83
RIC1	YLR039C	BIO2	P32451	375 aa		3.59	□□□□□ -1.83
RIC1	YLR039C	ULI1	P43604	169 aa		3.59	□□□□□ -1.83
RIC1	YLR039C	TUM1	Q08686	304 aa	Known RBP	3.59	□□□□□ -1.83
RIC1	YLR039C	IOC2	Q12072	812 aa		3.59	□□□□□ -1.83
RIC1	YLR039C	HST2	P53686	357 aa		3.59	□□□□□ -1.84
RIC1	YLR039C	EAP1	P36041	632 aa	Known RBP	3.58	□□□□□ -1.84
RIC1	YLR039C	PKH3	Q03306	898 aa	Predicted RBP	3.58	□□□□□ -1.84
RIC1	YLR039C	PML39	Q03760	334 aa		3.58	□□□□□ -1.84
RIC1	YLR039C	MPC54	Q08550	464 aa		3.58	□□□□□ -1.84
RIC1	YLR039C	TIF1	P10081	395 aa	Known RBP	3.58	□□□□□ -1.84
RIC1	YLR039C	CLB5	P30283	435 aa		3.58	□□□□□ -1.84
RIC1	YLR039C	TIF11	P38912	153 aa	Known RBP	3.58	□□□□□ -1.84
RIC1	YLR039C	YMR196W	Q04336	1088 aa		3.58	□□□□□ -1.84
RIC1	YLR039C	RAD59	Q12223	238 aa		3.58	□□□□□ -1.84
RIC1	YLR039C	MMP1	Q12372	583 aa		3.58	□□□□□ -1.84
RIC1	YLR039C	SIT4	P20604	311 aa		3.57	□□□□□ -1.84
RIC1	YLR039C	JIP4	Q03361	876 aa		3.57	□□□□□ -1.84
RIC1	YLR039C	TFB4	Q12004	338 aa		3.57	□□□□□ -1.84
RIC1	YLR039C	YBL036C	P38197	257 aa		3.57	□□□□□ -1.84
RIC1	YLR039C	SPP1	Q03012	353 aa		3.57	□□□□□ -1.84
RIC1	YLR039C	SUB2	Q07478	446 aa	Known RBP	3.57	□□□□□ -1.84
RIC1	YLR039C	YRR1	Q12172	810 aa		3.57	□□□□□ -1.84
RIC1	YLR039C	YNL108C	P53929	270 aa		3.56	□□□□□ -1.84
RIC1	YLR039C	DPL1	Q05567	589 aa		3.56	□□□□□ -1.84
RIC1	YLR039C	PEX21	P50091	288 aa		3.55	□□□□□ -1.84
RIC1	YLR039C	PEX29	Q03370	554 aa		3.55	□□□□□ -1.84
RIC1	YLR039C	YDR344C	Q05510	147 aa		3.55	□□□□□ -1.84
RIC1	YLR039C	ERF2	Q06551	359 aa		3.55	□□□□□ -1.84
RIC1	YLR039C	RSC30	P38781	883 aa		3.55	□□□□□ -1.84
RIC1	YLR039C	LDB19	Q12502	818 aa		3.55	□□□□□ -1.84
RIC1	YLR039C	ARG8	P18544	423 aa		3.54	□□□□□ -1.84
RIC1	YLR039C	YDJ1	P25491	409 aa	Known RBP	3.54	□□□□□ -1.84
RIC1	YLR039C	YNL035C	P53962	389 aa	Known RBP	3.54	□□□□□ -1.84
RIC1	YLR039C	YPR204W	Q08995	1032 aa		3.54	□□□□□ -1.84
RIC1	YLR039C	RPP1B	P10622	106 aa	Known RBP	3.54	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms