RNA–Protein interactions for RNA: YKR053C

YSR3, Transcript of Dihydrosphingosine 1-phosphate phosphatase, yeastyeast

Gene YSR3, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSR3YKR053C TY1B-BLQ12490 1755 aa16.22■□□□□ 0.19
YSR3YKR053C STH1P32597 1359 aa16.19■□□□□ 0.18
YSR3YKR053C ITT1Q04638 464 aa16.19■□□□□ 0.18
YSR3YKR053C SNQ2P32568 1501 aaKnown RBP16.19■□□□□ 0.18
YSR3YKR053C SNT2P53127 1403 aa16.18■□□□□ 0.18
YSR3YKR053C BNI1P41832 1953 aa16.15■□□□□ 0.18
YSR3YKR053C YRF1-1P0CX20 1796 aa16.15■□□□□ 0.18
YSR3YKR053C YRF1-5P0CX21 1796 aa16.15■□□□□ 0.18
YSR3YKR053C YRF1-8P0CX22 1796 aa16.15■□□□□ 0.18
YSR3YKR053C RPO21P04050 1733 aaKnown RBP16.14■□□□□ 0.17
YSR3YKR053C DRS2P39524 1355 aa16.13■□□□□ 0.17
YSR3YKR053C MET10P39692 1035 aa16.04■□□□□ 0.16
YSR3YKR053C MMS1Q06211 1407 aa16.03■□□□□ 0.16
YSR3YKR053C RTT106P40161 455 aa15.99■□□□□ 0.15
YSR3YKR053C MIF2P35201 549 aa15.97■□□□□ 0.15
YSR3YKR053C PDR12Q02785 1511 aa15.96■□□□□ 0.15
YSR3YKR053C NUP170P38181 1502 aa15.92■□□□□ 0.14
YSR3YKR053C SAS10Q12136 610 aaPredicted RBP15.9■□□□□ 0.14
YSR3YKR053C TAF7Q05021 590 aa15.89■□□□□ 0.13
YSR3YKR053C ULS1Q08562 1619 aa15.87■□□□□ 0.13
YSR3YKR053C PDR15Q04182 1529 aaKnown RBP15.87■□□□□ 0.13
YSR3YKR053C MLP2P40457 1679 aa15.86■□□□□ 0.13
YSR3YKR053C ABP1P15891 592 aaKnown RBP15.85■□□□□ 0.13
YSR3YKR053C SPO14P36126 1683 aa15.85■□□□□ 0.13
YSR3YKR053C GDB1Q06625 1536 aa15.83■□□□□ 0.12
YSR3YKR053C NUP157P40064 1391 aaKnown RBP15.82■□□□□ 0.12
YSR3YKR053C IRC20Q06554 1556 aa15.81■□□□□ 0.12
YSR3YKR053C IQG1Q12280 1495 aa15.8■□□□□ 0.12
YSR3YKR053C TRM3Q07527 1436 aa15.77■□□□□ 0.11
YSR3YKR053C PDR10P51533 1564 aa15.69■□□□□ 0.1
YSR3YKR053C BUD3P25558 1636 aa15.68■□□□□ 0.1
YSR3YKR053C DNF2Q12675 1612 aa15.68■□□□□ 0.1
YSR3YKR053C IFH1P39520 1085 aa15.68■□□□□ 0.1
YSR3YKR053C GEA1P47102 1408 aaPredicted RBP15.66■□□□□ 0.1
YSR3YKR053C CAT8P39113 1433 aa15.65■□□□□ 0.1
YSR3YKR053C DOP1Q03921 1698 aa15.62■□□□□ 0.09
YSR3YKR053C TY3B-GQ99315 1547 aa15.54■□□□□ 0.08
YSR3YKR053C ARO1P08566 1588 aaKnown RBP15.49■□□□□ 0.07
YSR3YKR053C YSP2Q06681 1438 aa15.45■□□□□ 0.06
YSR3YKR053C YFR006WP43590 535 aa15.44■□□□□ 0.06
YSR3YKR053C YBT1P32386 1661 aa15.41■□□□□ 0.06
YSR3YKR053C CKB1P43639 278 aa15.41■□□□□ 0.06
YSR3YKR053C CHC1P22137 1653 aaKnown RBP15.41■□□□□ 0.06
YSR3YKR053C BNR1P40450 1375 aa15.37■□□□□ 0.05
YSR3YKR053C YOR093CQ12275 1648 aa15.32■□□□□ 0.04
YSR3YKR053C SRB8P25648 1427 aa15.29■□□□□ 0.04
YSR3YKR053C YAP3P38749 330 aa15.26■□□□□ 0.03
YSR3YKR053C SEC7P11075 2009 aaKnown RBP15.26■□□□□ 0.03
YSR3YKR053C DNF3Q12674 1656 aa15.17■□□□□ 0.02
YSR3YKR053C URN1Q06525 465 aaKnown RBP15.17■□□□□ 0.02
YSR3YKR053C BUD21Q08492 214 aaPredicted RBP15.11■□□□□ 0.01
YSR3YKR053C IKI3Q06706 1349 aaKnown RBP15.09■□□□□ 0.01
YSR3YKR053C MAK10Q02197 733 aa15.06■□□□□ 0
YSR3YKR053C IPL1P38991 367 aa15□□□□□ -0.01
YSR3YKR053C HAP1P0CE41 1502 aa14.98□□□□□ -0.01
YSR3YKR053C NUP188P52593 1655 aaKnown RBP14.91□□□□□ -0.02
YSR3YKR053C SSM4P40318 1319 aa14.91□□□□□ -0.02
YSR3YKR053C TYS1P36421 394 aaKnown RBP14.88□□□□□ -0.03
YSR3YKR053C VMR1P38735 1592 aa14.87□□□□□ -0.03
YSR3YKR053C IML1P47170 1584 aa14.85□□□□□ -0.03
YSR3YKR053C PDR5P33302 1511 aaKnown RBP14.8□□□□□ -0.04
YSR3YKR053C YMR196WQ04336 1088 aa14.77□□□□□ -0.05
YSR3YKR053C PDR11P40550 1411 aa14.7□□□□□ -0.06
YSR3YKR053C TY1B-NL2Q99337 1749 aaKnown RBP14.68□□□□□ -0.06
YSR3YKR053C THI12P42883 340 aa14.67□□□□□ -0.06
YSR3YKR053C THI5P43534 340 aa14.67□□□□□ -0.06
YSR3YKR053C THI11P47183 340 aa14.67□□□□□ -0.06
YSR3YKR053C THI13Q07748 340 aa14.67□□□□□ -0.06
YSR3YKR053C GCN2P15442 1659 aa14.67□□□□□ -0.06
YSR3YKR053C USO1P25386 1790 aa14.6□□□□□ -0.07
YSR3YKR053C RAV1P47104 1357 aa14.58□□□□□ -0.08
YSR3YKR053C PAF1P38351 445 aa14.56□□□□□ -0.08
YSR3YKR053C CFT1Q06632 1357 aaKnown RBP14.54□□□□□ -0.08
YSR3YKR053C KRE5P22023 1365 aa14.51□□□□□ -0.09
YSR3YKR053C MRX12P47084 519 aa14.5□□□□□ -0.09
YSR3YKR053C BCK1Q01389 1478 aa14.48□□□□□ -0.09
YSR3YKR053C RTC1Q08281 1341 aa14.47□□□□□ -0.09
YSR3YKR053C RIA1P53893 1110 aa14.47□□□□□ -0.09
YSR3YKR053C BFR2Q06631 534 aaKnown RBP14.47□□□□□ -0.09
YSR3YKR053C YNR029CP53729 429 aaKnown RBP14.42□□□□□ -0.1
YSR3YKR053C NOP7P53261 605 aaKnown RBP14.4□□□□□ -0.1
YSR3YKR053C ALD4P46367 519 aaKnown RBP14.38□□□□□ -0.11
YSR3YKR053C CAB1Q04430 367 aa14.37□□□□□ -0.11
YSR3YKR053C RAD9P14737 1309 aa14.37□□□□□ -0.11
YSR3YKR053C PTP3P40048 928 aa14.32□□□□□ -0.12
YSR3YKR053C YAH1Q12184 172 aaKnown RBP14.32□□□□□ -0.12
YSR3YKR053C NUP192P47054 1683 aa14.3□□□□□ -0.12
YSR3YKR053C NAP1P25293 417 aaKnown RBP14.23□□□□□ -0.13
YSR3YKR053C ESL2P36168 1195 aa14.22□□□□□ -0.13
YSR3YKR053C TY3B-IQ7LHG5 1498 aaKnown RBP14.2□□□□□ -0.14
YSR3YKR053C APP1P53933 587 aa14.18□□□□□ -0.14
YSR3YKR053C TAF8Q03750 510 aa14.17□□□□□ -0.14
YSR3YKR053C TAF5P38129 798 aa14.15□□□□□ -0.14
YSR3YKR053C REB1P21538 810 aa14.11□□□□□ -0.15
YSR3YKR053C CPS1P27614 576 aa14.11□□□□□ -0.15
YSR3YKR053C YIL055CP40523 627 aaKnown RBP14.11□□□□□ -0.15
YSR3YKR053C GLN1P32288 370 aaKnown RBP14.07□□□□□ -0.16
YSR3YKR053C RCM1P53972 490 aa14.07□□□□□ -0.16
YSR3YKR053C ENT1Q12518 454 aa14.06□□□□□ -0.16
YSR3YKR053C PPH3P32345 308 aa14.01□□□□□ -0.17
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms