RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C YRF1-5P0CX21 1796 aa16.35■□□□□ 0.21
SHB17YKR043C YRF1-8P0CX22 1796 aa16.35■□□□□ 0.21
SHB17YKR043C RPO21P04050 1733 aaKnown RBP16.34■□□□□ 0.21
SHB17YKR043C SNQ2P32568 1501 aaKnown RBP16.3■□□□□ 0.2
SHB17YKR043C GEA2P39993 1459 aaKnown RBP16.28■□□□□ 0.2
SHB17YKR043C VPS15P22219 1454 aa16.27■□□□□ 0.19
SHB17YKR043C SNT2P53127 1403 aa16.22■□□□□ 0.19
SHB17YKR043C STH1P32597 1359 aa16.2■□□□□ 0.18
SHB17YKR043C BNI1P41832 1953 aa16.2■□□□□ 0.18
SHB17YKR043C ULS1Q08562 1619 aa16.11■□□□□ 0.17
SHB17YKR043C ITT1Q04638 464 aa16.1■□□□□ 0.17
SHB17YKR043C MLP2P40457 1679 aa16.1■□□□□ 0.17
SHB17YKR043C PDR15Q04182 1529 aaKnown RBP16.06■□□□□ 0.16
SHB17YKR043C DRS2P39524 1355 aa16.05■□□□□ 0.16
SHB17YKR043C SPO14P36126 1683 aa16.03■□□□□ 0.16
SHB17YKR043C SAS10Q12136 610 aaPredicted RBP16.03■□□□□ 0.16
SHB17YKR043C PDR12Q02785 1511 aa16.02■□□□□ 0.15
SHB17YKR043C MET10P39692 1035 aa16.01■□□□□ 0.15
SHB17YKR043C RTT106P40161 455 aa16■□□□□ 0.15
SHB17YKR043C NUP170P38181 1502 aa15.98■□□□□ 0.15
SHB17YKR043C IRC20Q06554 1556 aa15.97■□□□□ 0.15
SHB17YKR043C MMS1Q06211 1407 aa15.94■□□□□ 0.14
SHB17YKR043C GDB1Q06625 1536 aa15.94■□□□□ 0.14
SHB17YKR043C TAF7Q05021 590 aa15.92■□□□□ 0.14
SHB17YKR043C NUP157P40064 1391 aaKnown RBP15.86■□□□□ 0.13
SHB17YKR043C IQG1Q12280 1495 aa15.83■□□□□ 0.12
SHB17YKR043C PDR10P51533 1564 aa15.8■□□□□ 0.12
SHB17YKR043C IFH1P39520 1085 aa15.8■□□□□ 0.12
SHB17YKR043C GEA1P47102 1408 aaPredicted RBP15.79■□□□□ 0.12
SHB17YKR043C TY3B-GQ99315 1547 aa15.76■□□□□ 0.11
SHB17YKR043C DOP1Q03921 1698 aa15.75■□□□□ 0.11
SHB17YKR043C TRM3Q07527 1436 aa15.75■□□□□ 0.11
SHB17YKR043C DNF2Q12675 1612 aa15.75■□□□□ 0.11
SHB17YKR043C BUD3P25558 1636 aa15.72■□□□□ 0.11
SHB17YKR043C CAT8P39113 1433 aa15.71■□□□□ 0.11
SHB17YKR043C YBT1P32386 1661 aa15.71■□□□□ 0.11
SHB17YKR043C ABP1P15891 592 aaKnown RBP15.7■□□□□ 0.1
SHB17YKR043C MIF2P35201 549 aa15.7■□□□□ 0.1
SHB17YKR043C ARO1P08566 1588 aaKnown RBP15.61■□□□□ 0.09
SHB17YKR043C CHC1P22137 1653 aaKnown RBP15.59■□□□□ 0.09
SHB17YKR043C YSP2Q06681 1438 aa15.51■□□□□ 0.07
SHB17YKR043C CKB1P43639 278 aa15.47■□□□□ 0.07
SHB17YKR043C SEC7P11075 2009 aaKnown RBP15.43■□□□□ 0.06
SHB17YKR043C YOR093CQ12275 1648 aa15.42■□□□□ 0.06
SHB17YKR043C BNR1P40450 1375 aa15.4■□□□□ 0.06
SHB17YKR043C SRB8P25648 1427 aa15.37■□□□□ 0.05
SHB17YKR043C DNF3Q12674 1656 aa15.27■□□□□ 0.03
SHB17YKR043C IKI3Q06706 1349 aaKnown RBP15.24■□□□□ 0.03
SHB17YKR043C YFR006WP43590 535 aa15.21■□□□□ 0.03
SHB17YKR043C YAP3P38749 330 aa15.19■□□□□ 0.02
SHB17YKR043C BUD21Q08492 214 aaPredicted RBP15.16■□□□□ 0.02
SHB17YKR043C SSM4P40318 1319 aa15.11■□□□□ 0.01
SHB17YKR043C NUP188P52593 1655 aaKnown RBP15.09■□□□□ 0.01
SHB17YKR043C URN1Q06525 465 aaKnown RBP15.09■□□□□ 0.01
SHB17YKR043C VMR1P38735 1592 aa15.07■□□□□ 0
SHB17YKR043C MAK10Q02197 733 aa14.99□□□□□ -0.01
SHB17YKR043C IML1P47170 1584 aa14.98□□□□□ -0.01
SHB17YKR043C IPL1P38991 367 aa14.98□□□□□ -0.01
SHB17YKR043C HAP1P0CE41 1502 aa14.97□□□□□ -0.01
SHB17YKR043C PDR5P33302 1511 aaKnown RBP14.94□□□□□ -0.02
SHB17YKR043C GCN2P15442 1659 aa14.93□□□□□ -0.02
SHB17YKR043C TYS1P36421 394 aaKnown RBP14.93□□□□□ -0.02
SHB17YKR043C USO1P25386 1790 aa14.85□□□□□ -0.03
SHB17YKR043C PDR11P40550 1411 aa14.83□□□□□ -0.04
SHB17YKR043C TY1B-NL2Q99337 1749 aaKnown RBP14.75□□□□□ -0.05
SHB17YKR043C RAV1P47104 1357 aa14.66□□□□□ -0.06
SHB17YKR043C YMR196WQ04336 1088 aa14.64□□□□□ -0.07
SHB17YKR043C THI12P42883 340 aa14.62□□□□□ -0.07
SHB17YKR043C THI5P43534 340 aa14.62□□□□□ -0.07
SHB17YKR043C THI11P47183 340 aa14.62□□□□□ -0.07
SHB17YKR043C THI13Q07748 340 aa14.62□□□□□ -0.07
SHB17YKR043C PAF1P38351 445 aa14.61□□□□□ -0.07
SHB17YKR043C KRE5P22023 1365 aa14.57□□□□□ -0.08
SHB17YKR043C BCK1Q01389 1478 aa14.57□□□□□ -0.08
SHB17YKR043C BFR2Q06631 534 aaKnown RBP14.56□□□□□ -0.08
SHB17YKR043C CFT1Q06632 1357 aaKnown RBP14.56□□□□□ -0.08
SHB17YKR043C NUP192P47054 1683 aa14.55□□□□□ -0.08
SHB17YKR043C RTC1Q08281 1341 aa14.54□□□□□ -0.08
SHB17YKR043C NOP7P53261 605 aaKnown RBP14.51□□□□□ -0.09
SHB17YKR043C MRX12P47084 519 aa14.5□□□□□ -0.09
SHB17YKR043C RIA1P53893 1110 aa14.5□□□□□ -0.09
SHB17YKR043C RAD9P14737 1309 aa14.45□□□□□ -0.1
SHB17YKR043C ALD4P46367 519 aaKnown RBP14.43□□□□□ -0.1
SHB17YKR043C YNR029CP53729 429 aaKnown RBP14.42□□□□□ -0.1
SHB17YKR043C CAB1Q04430 367 aa14.42□□□□□ -0.1
SHB17YKR043C TY3B-IQ7LHG5 1498 aaKnown RBP14.3□□□□□ -0.12
SHB17YKR043C ESL2P36168 1195 aa14.29□□□□□ -0.12
SHB17YKR043C TAF5P38129 798 aa14.29□□□□□ -0.12
SHB17YKR043C PTP3P40048 928 aa14.26□□□□□ -0.13
SHB17YKR043C TAF8Q03750 510 aa14.24□□□□□ -0.13
SHB17YKR043C NAP1P25293 417 aaKnown RBP14.22□□□□□ -0.13
SHB17YKR043C YAH1Q12184 172 aaKnown RBP14.2□□□□□ -0.14
SHB17YKR043C RCM1P53972 490 aa14.15□□□□□ -0.14
SHB17YKR043C CPS1P27614 576 aa14.13□□□□□ -0.15
SHB17YKR043C APP1P53933 587 aa14.13□□□□□ -0.15
SHB17YKR043C KIP3P53086 805 aaKnown RBP14.11□□□□□ -0.15
SHB17YKR043C SPE2P21182 396 aa14.1□□□□□ -0.15
SHB17YKR043C PPH3P32345 308 aa14.09□□□□□ -0.15
SHB17YKR043C REB1P21538 810 aa14.07□□□□□ -0.16
SHB17YKR043C YLR419WQ06698 1435 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms