RNA–Protein interactions for RNA: YKR002W

PAP1, Transcript of Poly(A) polymerase, yeastyeast

Gene PAP1, Length 1,707 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAP1YKR002W ATG32P40458 529 aa8.88□□□□□ -0.99
PAP1YKR002W BRL1P38770 471 aa8.87□□□□□ -0.99
PAP1YKR002W PTC3P34221 468 aaKnown RBP8.86□□□□□ -0.99
PAP1YKR002W AIM44Q99299 758 aa8.86□□□□□ -0.99
PAP1YKR002W YFR006WP43590 535 aa8.85□□□□□ -0.99
PAP1YKR002W YJL007CP47080 104 aa8.85□□□□□ -0.99
PAP1YKR002W UBP14P38237 781 aaKnown RBP8.84□□□□□ -0.99
PAP1YKR002W DBP1P24784 617 aaKnown RBP8.83□□□□□ -1
PAP1YKR002W VHR2P40041 505 aa8.82□□□□□ -1
PAP1YKR002W CSN12P47130 423 aa8.82□□□□□ -1
PAP1YKR002W MRX12P47084 519 aa8.81□□□□□ -1
PAP1YKR002W KTR1P27810 393 aaKnown RBP8.8□□□□□ -1
PAP1YKR002W ERG12P07277 443 aa8.8□□□□□ -1
PAP1YKR002W SSA2P10592 639 aaKnown RBP8.8□□□□□ -1
PAP1YKR002W NAP1P25293 417 aaKnown RBP8.78□□□□□ -1
PAP1YKR002W IOC4Q04213 475 aa8.78□□□□□ -1
PAP1YKR002W YLR326WQ06170 240 aaKnown RBP8.78□□□□□ -1
PAP1YKR002W SSA4P22202 642 aaKnown RBP8.77□□□□□ -1.01
PAP1YKR002W MAP2P38174 421 aaKnown RBP8.77□□□□□ -1.01
PAP1YKR002W TIF1P10081 395 aaKnown RBP8.76□□□□□ -1.01
PAP1YKR002W CPS1P27614 576 aa8.74□□□□□ -1.01
PAP1YKR002W PSE1P32337 1089 aaKnown RBP8.74□□□□□ -1.01
PAP1YKR002W NOB1Q08444 459 aaKnown RBP8.73□□□□□ -1.01
PAP1YKR002W TTI1P36097 1038 aa8.71□□□□□ -1.01
PAP1YKR002W BIO2P32451 375 aa8.7□□□□□ -1.02
PAP1YKR002W YOR238WQ08634 303 aa8.7□□□□□ -1.02
PAP1YKR002W TYW1Q08960 810 aaKnown RBP8.7□□□□□ -1.02
PAP1YKR002W UBP10P53874 792 aaPredicted RBP8.68□□□□□ -1.02
PAP1YKR002W PCS60P38137 543 aaKnown RBP RIP-Chip data8.67□□□□□ -1.02not detected
PAP1YKR002W YPR204WQ08995 1032 aa8.66□□□□□ -1.02
PAP1YKR002W RPL34BP40525 121 aaKnown RBP8.66□□□□□ -1.02
PAP1YKR002W SEN54Q02825 467 aaPredicted RBP8.66□□□□□ -1.02
PAP1YKR002W ORC6P38826 435 aa8.64□□□□□ -1.03
PAP1YKR002W NOP7P53261 605 aaKnown RBP8.64□□□□□ -1.03
PAP1YKR002W PAM1P37304 830 aaKnown RBP8.63□□□□□ -1.03
PAP1YKR002W YBL036CP38197 257 aa8.63□□□□□ -1.03
PAP1YKR002W SSF1P38789 453 aaPredicted RBP8.63□□□□□ -1.03
PAP1YKR002W YGR273CP53329 174 aa8.63□□□□□ -1.03
PAP1YKR002W CDC3P32457 520 aaKnown RBP8.63□□□□□ -1.03
PAP1YKR002W RTG2P32608 588 aaKnown RBP8.63□□□□□ -1.03
PAP1YKR002W SLX5P32828 619 aaKnown RBP8.63□□□□□ -1.03
PAP1YKR002W SLD2P34252 453 aa8.63□□□□□ -1.03
PAP1YKR002W SOL3P38858 249 aa8.63□□□□□ -1.03
PAP1YKR002W TEA1P47988 759 aa8.63□□□□□ -1.03
PAP1YKR002W YML083CQ04526 418 aa8.63□□□□□ -1.03
PAP1YKR002W KEX1P09620 729 aa8.62□□□□□ -1.03
PAP1YKR002W KIC1P38692 1080 aa8.62□□□□□ -1.03
PAP1YKR002W RAD54P32863 898 aa8.61□□□□□ -1.03
PAP1YKR002W VMA1P17255 1071 aaKnown RBP8.6□□□□□ -1.03
PAP1YKR002W SNU71P53207 620 aaKnown RBP8.6□□□□□ -1.03
PAP1YKR002W RPL34AP87262 121 aaPredicted RBP8.6□□□□□ -1.03
PAP1YKR002W HAA1Q12753 694 aaKnown RBP8.6□□□□□ -1.03
PAP1YKR002W GUT1P32190 709 aa8.6□□□□□ -1.03
PAP1YKR002W YNL108CP53929 270 aa8.6□□□□□ -1.03
PAP1YKR002W PIB1Q06651 286 aa8.6□□□□□ -1.03
PAP1YKR002W PUP1P25043 261 aa8.59□□□□□ -1.03
PAP1YKR002W ATH1P48016 1211 aa8.59□□□□□ -1.03
PAP1YKR002W RRN6P32786 894 aa8.58□□□□□ -1.04
PAP1YKR002W RGR1P19263 1082 aa8.57□□□□□ -1.04
PAP1YKR002W GRE2Q12068 342 aaKnown RBP8.57□□□□□ -1.04
PAP1YKR002W SUP45P12385 437 aaKnown RBP8.56□□□□□ -1.04
PAP1YKR002W NIS1P53939 407 aa8.55□□□□□ -1.04
PAP1YKR002W RAD59Q12223 238 aa8.55□□□□□ -1.04
PAP1YKR002W HEM3P28789 327 aa8.54□□□□□ -1.04
PAP1YKR002W HAT1Q12341 374 aa8.54□□□□□ -1.04
PAP1YKR002W HST2P53686 357 aa8.53□□□□□ -1.04
PAP1YKR002W FPK1P53739 893 aa8.53□□□□□ -1.04
PAP1YKR002W NST1P53935 1240 aa8.53□□□□□ -1.04
PAP1YKR002W SCJ1P25303 377 aa8.52□□□□□ -1.05
PAP1YKR002W ENO1P00924 437 aaKnown RBP8.51□□□□□ -1.05
PAP1YKR002W CSE4P36012 229 aa8.51□□□□□ -1.05
PAP1YKR002W MET10P39692 1035 aa8.51□□□□□ -1.05
PAP1YKR002W MRX10Q05648 414 aa8.51□□□□□ -1.05
PAP1YKR002W ESS1P22696 170 aa8.51□□□□□ -1.05
PAP1YKR002W MVP1P40959 511 aaKnown RBP8.51□□□□□ -1.05
PAP1YKR002W PKH3Q03306 898 aaPredicted RBP8.51□□□□□ -1.05
PAP1YKR002W ENO2P00925 437 aaKnown RBP8.5□□□□□ -1.05
PAP1YKR002W YJU3P28321 313 aa8.49□□□□□ -1.05
PAP1YKR002W YDJ1P25491 409 aaKnown RBP8.49□□□□□ -1.05
PAP1YKR002W NSR1P27476 414 aaKnown RBP RIP-Chip data8.49□□□□□ -1.05not detected
PAP1YKR002W GAP1P19145 602 aaPredicted RBP8.48□□□□□ -1.05
PAP1YKR002W SAM3Q08986 587 aa8.47□□□□□ -1.05
PAP1YKR002W MMP1Q12372 583 aa8.47□□□□□ -1.05
PAP1YKR002W CLB5P30283 435 aa8.46□□□□□ -1.06
PAP1YKR002W ILV3P39522 585 aaKnown RBP8.46□□□□□ -1.06
PAP1YKR002W TGL4P36165 910 aa8.45□□□□□ -1.06
PAP1YKR002W IPL1P38991 367 aa8.45□□□□□ -1.06
PAP1YKR002W RIM21P48565 533 aa8.45□□□□□ -1.06
PAP1YKR002W YAP5P40574 245 aa8.43□□□□□ -1.06
PAP1YKR002W YMR196WQ04336 1088 aa8.43□□□□□ -1.06
PAP1YKR002W RSC30P38781 883 aa8.42□□□□□ -1.06
PAP1YKR002W SIT4P20604 311 aa8.41□□□□□ -1.06
PAP1YKR002W PEP12P32854 288 aa8.4□□□□□ -1.06
PAP1YKR002W SIS2P36024 562 aa8.4□□□□□ -1.06
PAP1YKR002W YPR109WQ06104 294 aa8.4□□□□□ -1.06
PAP1YKR002W GYP5Q12344 894 aa8.4□□□□□ -1.06
PAP1YKR002W ARG8P18544 423 aa8.4□□□□□ -1.07
PAP1YKR002W ALD2P47771 506 aa8.4□□□□□ -1.07
PAP1YKR002W YTA7P40340 1379 aa8.38□□□□□ -1.07
PAP1YKR002W RDS2P19541 446 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms