RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeastyeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOS1YKL205W YRF1-8P0CX22 1796 aa6.66□□□□□ -1.34
LOS1YKL205W PDR12Q02785 1511 aa6.66□□□□□ -1.34
LOS1YKL205W DNF1P32660 1571 aa6.65□□□□□ -1.34
LOS1YKL205W YBT1P32386 1661 aa6.6□□□□□ -1.35
LOS1YKL205W SPP41P38904 1435 aa6.6□□□□□ -1.35
LOS1YKL205W TSC11P40061 1430 aa6.57□□□□□ -1.36
LOS1YKL205W SPO14P36126 1683 aa6.57□□□□□ -1.36
LOS1YKL205W GDB1Q06625 1536 aa6.54□□□□□ -1.36
LOS1YKL205W GEA2P39993 1459 aaKnown RBP6.53□□□□□ -1.36
LOS1YKL205W TY3B-GQ99315 1547 aa6.53□□□□□ -1.36
LOS1YKL205W HAP1P0CE41 1502 aa6.52□□□□□ -1.37
LOS1YKL205W BUD3P25558 1636 aa6.5□□□□□ -1.37
LOS1YKL205W DOP1Q03921 1698 aa6.49□□□□□ -1.37
LOS1YKL205W PDR15Q04182 1529 aaKnown RBP6.49□□□□□ -1.37
LOS1YKL205W CAT8P39113 1433 aa6.47□□□□□ -1.37
LOS1YKL205W VPS15P22219 1454 aa6.47□□□□□ -1.37
LOS1YKL205W CHC1P22137 1653 aaKnown RBP6.47□□□□□ -1.37
LOS1YKL205W IQG1Q12280 1495 aa6.47□□□□□ -1.37
LOS1YKL205W LTE1P07866 1435 aa6.46□□□□□ -1.38
LOS1YKL205W BNI1P41832 1953 aa6.45□□□□□ -1.38
LOS1YKL205W NUP159P40477 1460 aa6.45□□□□□ -1.38
LOS1YKL205W STH1P32597 1359 aa6.45□□□□□ -1.38
LOS1YKL205W RSE1Q04693 1361 aaKnown RBP6.44□□□□□ -1.38
LOS1YKL205W TRM732Q03496 1420 aa6.43□□□□□ -1.38
LOS1YKL205W PDR5P33302 1511 aaKnown RBP6.43□□□□□ -1.38
LOS1YKL205W TRM3Q07527 1436 aa6.42□□□□□ -1.38
LOS1YKL205W ARO1P08566 1588 aaKnown RBP6.39□□□□□ -1.39
LOS1YKL205W GCN2P15442 1659 aa6.36□□□□□ -1.39
LOS1YKL205W GEA1P47102 1408 aaPredicted RBP6.32□□□□□ -1.4
LOS1YKL205W TAF7Q05021 590 aa6.32□□□□□ -1.4
LOS1YKL205W SEC7P11075 2009 aaKnown RBP6.31□□□□□ -1.4
LOS1YKL205W DNF2Q12675 1612 aa6.31□□□□□ -1.4
LOS1YKL205W YOR093CQ12275 1648 aa6.26□□□□□ -1.41
LOS1YKL205W NUP188P52593 1655 aaKnown RBP6.25□□□□□ -1.41
LOS1YKL205W MMS1Q06211 1407 aa6.24□□□□□ -1.41
LOS1YKL205W IKI3Q06706 1349 aaKnown RBP6.22□□□□□ -1.41
LOS1YKL205W YSP2Q06681 1438 aa6.21□□□□□ -1.41
LOS1YKL205W SRB8P25648 1427 aa6.2□□□□□ -1.42
LOS1YKL205W VMR1P38735 1592 aa6.17□□□□□ -1.42
LOS1YKL205W DNF3Q12674 1656 aa6.16□□□□□ -1.42
LOS1YKL205W MET10P39692 1035 aa6.14□□□□□ -1.43
LOS1YKL205W NUP157P40064 1391 aaKnown RBP6.12□□□□□ -1.43
LOS1YKL205W TY1B-NL2Q99337 1749 aaKnown RBP6.11□□□□□ -1.43
LOS1YKL205W DRS2P39524 1355 aa6.11□□□□□ -1.43
LOS1YKL205W NUP192P47054 1683 aa6.09□□□□□ -1.44
LOS1YKL205W IML1P47170 1584 aa6.06□□□□□ -1.44
LOS1YKL205W TY3B-IQ7LHG5 1498 aaKnown RBP6.02□□□□□ -1.45
LOS1YKL205W SSM4P40318 1319 aa5.98□□□□□ -1.45
LOS1YKL205W BNR1P40450 1375 aa5.97□□□□□ -1.45
LOS1YKL205W RTT106P40161 455 aa5.93□□□□□ -1.46
LOS1YKL205W RAV1P47104 1357 aa5.93□□□□□ -1.46
LOS1YKL205W ITT1Q04638 464 aa5.91□□□□□ -1.46
LOS1YKL205W CFT1Q06632 1357 aaKnown RBP5.9□□□□□ -1.47
LOS1YKL205W BCK1Q01389 1478 aa5.89□□□□□ -1.47
LOS1YKL205W PDR11P40550 1411 aa5.88□□□□□ -1.47
LOS1YKL205W USO1P25386 1790 aa5.86□□□□□ -1.47
LOS1YKL205W RTC1Q08281 1341 aa5.84□□□□□ -1.47
LOS1YKL205W YRF1-2P40105 1681 aa5.82□□□□□ -1.48
LOS1YKL205W MTC1P47018 478 aaKnown RBP5.81□□□□□ -1.48
LOS1YKL205W URN1Q06525 465 aaKnown RBP5.81□□□□□ -1.48
LOS1YKL205W RQC2Q12532 1038 aaKnown RBP5.81□□□□□ -1.48
LOS1YKL205W APC1P53886 1748 aa5.8□□□□□ -1.48
LOS1YKL205W SAS10Q12136 610 aaPredicted RBP5.8□□□□□ -1.48
LOS1YKL205W IOC4Q04213 475 aa5.76□□□□□ -1.49
LOS1YKL205W RRP5Q05022 1729 aaKnown RBP5.76□□□□□ -1.49
LOS1YKL205W IFH1P39520 1085 aa5.74□□□□□ -1.49
LOS1YKL205W TY4B-HP0C2J7 1802 aa5.74□□□□□ -1.49
LOS1YKL205W TY4B-JP47024 1803 aa5.74□□□□□ -1.49
LOS1YKL205W YAP3P38749 330 aa5.74□□□□□ -1.49
LOS1YKL205W IPL1P38991 367 aa5.73□□□□□ -1.49
LOS1YKL205W MLP1Q02455 1875 aaKnown RBP5.72□□□□□ -1.49
LOS1YKL205W BUD21Q08492 214 aaPredicted RBP5.72□□□□□ -1.49
LOS1YKL205W YIL177CP40434 1758 aa5.68□□□□□ -1.5
LOS1YKL205W YJL225CP40889 1758 aa5.68□□□□□ -1.5
LOS1YKL205W YLR419WQ06698 1435 aaKnown RBP5.66□□□□□ -1.5
LOS1YKL205W SCT1P32784 759 aa5.66□□□□□ -1.5
LOS1YKL205W PSK1P31374 1356 aa5.66□□□□□ -1.5
LOS1YKL205W FKS3Q04952 1785 aa5.65□□□□□ -1.5
LOS1YKL205W SNF2P22082 1703 aa5.65□□□□□ -1.51
LOS1YKL205W CKB1P43639 278 aa5.63□□□□□ -1.51
LOS1YKL205W MAK10Q02197 733 aa5.63□□□□□ -1.51
LOS1YKL205W URB1P34241 1764 aaKnown RBP5.62□□□□□ -1.51
LOS1YKL205W ADE6P38972 1358 aaKnown RBP5.61□□□□□ -1.51
LOS1YKL205W YMR196WQ04336 1088 aa5.6□□□□□ -1.51
LOS1YKL205W BFR2Q06631 534 aaKnown RBP5.6□□□□□ -1.51
LOS1YKL205W MIF2P35201 549 aa5.6□□□□□ -1.51
LOS1YKL205W YRF1-3P0CX14 1859 aa5.6□□□□□ -1.51
LOS1YKL205W YRF1-7P0CX15 1859 aa5.6□□□□□ -1.51
LOS1YKL205W YRF1-6P53819 1859 aa5.6□□□□□ -1.51
LOS1YKL205W EDE1P34216 1381 aa5.6□□□□□ -1.51
LOS1YKL205W MHP1P43638 1398 aa5.59□□□□□ -1.51
LOS1YKL205W PRP43P53131 767 aaKnown RBP5.58□□□□□ -1.52
LOS1YKL205W ESL2P36168 1195 aa5.57□□□□□ -1.52
LOS1YKL205W ALD4P46367 519 aaKnown RBP5.57□□□□□ -1.52
LOS1YKL205W YML133CQ03099 1374 aa5.56□□□□□ -1.52
LOS1YKL205W YLL067CQ07888 1374 aa5.56□□□□□ -1.52
LOS1YKL205W YLL066CQ99208 1374 aa5.56□□□□□ -1.52
LOS1YKL205W TYS1P36421 394 aaKnown RBP5.55□□□□□ -1.52
LOS1YKL205W PAF1P38351 445 aa5.55□□□□□ -1.52
LOS1YKL205W UTP10P42945 1769 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms