RNA–Protein interactions for RNA: YKL108W

SLD2, Transcript of Single-stranded DNA origin-binding and annealing protein, yeastyeast

Gene SLD2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD2YKL108W GEF1P37020 779 aa8.05□□□□□ -1.12
SLD2YKL108W DBP1P24784 617 aaKnown RBP8.04□□□□□ -1.12
SLD2YKL108W YJL007CP47080 104 aa8.04□□□□□ -1.12
SLD2YKL108W BIM1P40013 344 aa8.03□□□□□ -1.12
SLD2YKL108W NOP8Q08287 484 aaPredicted RBP8.03□□□□□ -1.12
SLD2YKL108W PTC3P34221 468 aaKnown RBP8.02□□□□□ -1.13
SLD2YKL108W VHR2P40041 505 aa8.01□□□□□ -1.13
SLD2YKL108W CSN12P47130 423 aa8□□□□□ -1.13
SLD2YKL108W MAP2P38174 421 aaKnown RBP7.98□□□□□ -1.13
SLD2YKL108W UBP14P38237 781 aaKnown RBP7.98□□□□□ -1.13
SLD2YKL108W ATG32P40458 529 aa7.98□□□□□ -1.13
SLD2YKL108W AIM44Q99299 758 aa7.98□□□□□ -1.13
SLD2YKL108W GLN1P32288 370 aaKnown RBP7.97□□□□□ -1.13
SLD2YKL108W YDR090CQ03193 310 aa7.97□□□□□ -1.13
SLD2YKL108W SSA2P10592 639 aaKnown RBP7.97□□□□□ -1.13
SLD2YKL108W UBP10P53874 792 aaPredicted RBP7.97□□□□□ -1.13
SLD2YKL108W SSA4P22202 642 aaKnown RBP7.92□□□□□ -1.14
SLD2YKL108W KIC1P38692 1080 aa7.92□□□□□ -1.14
SLD2YKL108W RPL34BP40525 121 aaKnown RBP7.92□□□□□ -1.14
SLD2YKL108W YOR238WQ08634 303 aa7.92□□□□□ -1.14
SLD2YKL108W ERG12P07277 443 aa7.91□□□□□ -1.14
SLD2YKL108W YLR326WQ06170 240 aaKnown RBP7.9□□□□□ -1.14
SLD2YKL108W TIF1P10081 395 aaKnown RBP7.89□□□□□ -1.15
SLD2YKL108W CPS1P27614 576 aa7.89□□□□□ -1.15
SLD2YKL108W SLX5P32828 619 aaKnown RBP7.89□□□□□ -1.15
SLD2YKL108W TYW1Q08960 810 aaKnown RBP7.89□□□□□ -1.15
SLD2YKL108W PSE1P32337 1089 aaKnown RBP7.88□□□□□ -1.15
SLD2YKL108W PIB1Q06651 286 aa7.88□□□□□ -1.15
SLD2YKL108W KTR1P27810 393 aaKnown RBP7.87□□□□□ -1.15
SLD2YKL108W YPR204WQ08995 1032 aa7.86□□□□□ -1.15
SLD2YKL108W YBL036CP38197 257 aa7.85□□□□□ -1.15
SLD2YKL108W ATH1P48016 1211 aa7.85□□□□□ -1.15
SLD2YKL108W UBP9P39967 754 aa7.84□□□□□ -1.15
SLD2YKL108W TEA1P47988 759 aa7.84□□□□□ -1.15
SLD2YKL108W SLD2P34252 453 aa7.84□□□□□ -1.16
SLD2YKL108W RPL34AP87262 121 aaPredicted RBP7.84□□□□□ -1.16
SLD2YKL108W RTG2P32608 588 aaKnown RBP7.83□□□□□ -1.16
SLD2YKL108W RAD54P32863 898 aa7.83□□□□□ -1.16
SLD2YKL108W PCS60P38137 543 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16 RIP-Chip
SLD2YKL108W ORC1P54784 914 aaPredicted RBP7.83□□□□□ -1.16
SLD2YKL108W TTI1P36097 1038 aa7.82□□□□□ -1.16
SLD2YKL108W NOP7P53261 605 aaKnown RBP7.82□□□□□ -1.16
SLD2YKL108W MRX12P47084 519 aa7.81□□□□□ -1.16
SLD2YKL108W GRE2Q12068 342 aaKnown RBP7.81□□□□□ -1.16
SLD2YKL108W YGR273CP53329 174 aa7.8□□□□□ -1.16
SLD2YKL108W NOB1Q08444 459 aaKnown RBP7.8□□□□□ -1.16
SLD2YKL108W KEX1P09620 729 aa7.79□□□□□ -1.16
SLD2YKL108W GUT1P32190 709 aa7.79□□□□□ -1.16
SLD2YKL108W YNL108CP53929 270 aa7.79□□□□□ -1.16
SLD2YKL108W VMA1P17255 1071 aaKnown RBP7.78□□□□□ -1.16
SLD2YKL108W BIO2P32451 375 aa7.78□□□□□ -1.16
SLD2YKL108W CDC3P32457 520 aaKnown RBP7.77□□□□□ -1.17
SLD2YKL108W ORC6P38826 435 aa7.74□□□□□ -1.17
SLD2YKL108W RGR1P19263 1082 aa7.73□□□□□ -1.17
SLD2YKL108W SOL3P38858 249 aa7.73□□□□□ -1.17
SLD2YKL108W SNU71P53207 620 aaKnown RBP7.73□□□□□ -1.17
SLD2YKL108W PKH3Q03306 898 aaPredicted RBP7.73□□□□□ -1.17
SLD2YKL108W YML083CQ04526 418 aa7.73□□□□□ -1.17
SLD2YKL108W NAP1P25293 417 aaKnown RBP7.72□□□□□ -1.17
SLD2YKL108W SCJ1P25303 377 aa7.72□□□□□ -1.17
SLD2YKL108W ESS1P22696 170 aa7.71□□□□□ -1.17
SLD2YKL108W NIS1P53939 407 aa7.71□□□□□ -1.17
SLD2YKL108W RAD59Q12223 238 aa7.71□□□□□ -1.17
SLD2YKL108W HAT1Q12341 374 aa7.71□□□□□ -1.17
SLD2YKL108W FPK1P53739 893 aa7.71□□□□□ -1.18
SLD2YKL108W IOC4Q04213 475 aa7.71□□□□□ -1.18
SLD2YKL108W YMR196WQ04336 1088 aa7.71□□□□□ -1.18
SLD2YKL108W MMP1Q12372 583 aa7.71□□□□□ -1.18
SLD2YKL108W MET10P39692 1035 aa7.7□□□□□ -1.18
SLD2YKL108W PUP1P25043 261 aa7.69□□□□□ -1.18
SLD2YKL108W CSE4P36012 229 aa7.69□□□□□ -1.18
SLD2YKL108W SSF1P38789 453 aaPredicted RBP7.69□□□□□ -1.18
SLD2YKL108W YAP5P40574 245 aa7.69□□□□□ -1.18
SLD2YKL108W MVP1P40959 511 aaKnown RBP7.69□□□□□ -1.18
SLD2YKL108W HEM3P28789 327 aa7.68□□□□□ -1.18
SLD2YKL108W RRN6P32786 894 aa7.68□□□□□ -1.18
SLD2YKL108W HST2P53686 357 aa7.68□□□□□ -1.18
SLD2YKL108W SUP45P12385 437 aaKnown RBP7.67□□□□□ -1.18
SLD2YKL108W YJU3P28321 313 aa7.67□□□□□ -1.18
SLD2YKL108W GYP5Q12344 894 aa7.67□□□□□ -1.18
SLD2YKL108W ENO1P00924 437 aaKnown RBP7.66□□□□□ -1.18
SLD2YKL108W YDJ1P25491 409 aaKnown RBP7.66□□□□□ -1.18
SLD2YKL108W SEN54Q02825 467 aaPredicted RBP7.66□□□□□ -1.18
SLD2YKL108W ARG8P18544 423 aa7.65□□□□□ -1.18
SLD2YKL108W CLB5P30283 435 aa7.65□□□□□ -1.18
SLD2YKL108W ENO2P00925 437 aaKnown RBP7.64□□□□□ -1.19
SLD2YKL108W PAM1P37304 830 aaKnown RBP7.64□□□□□ -1.19
SLD2YKL108W YPR109WQ06104 294 aa7.64□□□□□ -1.19
SLD2YKL108W DCW1P36091 449 aa7.62□□□□□ -1.19
SLD2YKL108W TIF4632P39936 914 aaKnown RBP7.62□□□□□ -1.19
SLD2YKL108W SAM3Q08986 587 aa7.62□□□□□ -1.19
SLD2YKL108W TGL3P40308 642 aa7.61□□□□□ -1.19
SLD2YKL108W NSR1P27476 414 aaKnown RBP RIP-Chip data7.6□□□□□ -1.19not detected
SLD2YKL108W TGL4P36165 910 aa7.6□□□□□ -1.19
SLD2YKL108W MRX10Q05648 414 aa7.59□□□□□ -1.19
SLD2YKL108W NST1P53935 1240 aa7.59□□□□□ -1.2
SLD2YKL108W IPL1P38991 367 aa7.57□□□□□ -1.2
SLD2YKL108W ILV3P39522 585 aaKnown RBP7.57□□□□□ -1.2
SLD2YKL108W ITT1Q04638 464 aa7.57□□□□□ -1.2
SLD2YKL108W GAP1P19145 602 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms