RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W SPC42P36094 363 aa5.8□□□□□ -1.48
AVT1YJR001W NOP2P40991 618 aaKnown RBP5.8□□□□□ -1.48
AVT1YJR001W YTA7P40340 1379 aa5.79□□□□□ -1.48
AVT1YJR001W GLC3P32775 704 aa5.78□□□□□ -1.48
AVT1YJR001W SLD2P34252 453 aa5.78□□□□□ -1.48
AVT1YJR001W PBS2P08018 668 aa5.77□□□□□ -1.49
AVT1YJR001W YIL055CP40523 627 aaKnown RBP5.77□□□□□ -1.49
AVT1YJR001W RRN6P32786 894 aa5.76□□□□□ -1.49
AVT1YJR001W RTS3P53289 263 aa5.76□□□□□ -1.49
AVT1YJR001W SUB1P54000 292 aaKnown RBP5.76□□□□□ -1.49
AVT1YJR001W HPC2Q01448 625 aa5.76□□□□□ -1.49
AVT1YJR001W ASF1P32447 279 aa5.75□□□□□ -1.49
AVT1YJR001W HIR3P47171 1648 aa5.74□□□□□ -1.49
AVT1YJR001W RAM2P29703 316 aa5.74□□□□□ -1.49
AVT1YJR001W OCA5P38738 679 aa5.74□□□□□ -1.49
AVT1YJR001W VPS72Q03388 795 aa5.74□□□□□ -1.49
AVT1YJR001W GIN4Q12263 1142 aa5.74□□□□□ -1.49
AVT1YJR001W HEM3P28789 327 aa5.72□□□□□ -1.49
AVT1YJR001W MDG1P53885 366 aa5.72□□□□□ -1.49
AVT1YJR001W TFB3Q03290 321 aa5.72□□□□□ -1.49
AVT1YJR001W RSM7P47150 247 aa5.71□□□□□ -1.49
AVT1YJR001W TPO2P53283 614 aa5.71□□□□□ -1.49
AVT1YJR001W SEN54Q02825 467 aaPredicted RBP5.71□□□□□ -1.5
AVT1YJR001W DIT2P21595 489 aa5.7□□□□□ -1.5
AVT1YJR001W OSW7P43611 510 aa5.7□□□□□ -1.5
AVT1YJR001W YJR008WP47085 338 aa5.7□□□□□ -1.5
AVT1YJR001W XRN1P22147 1528 aaKnown RBP5.69□□□□□ -1.5
AVT1YJR001W SSF1P38789 453 aaPredicted RBP5.69□□□□□ -1.5
AVT1YJR001W CWC22P53333 577 aaKnown RBP5.69□□□□□ -1.5
AVT1YJR001W NUP42P49686 430 aaKnown RBP5.69□□□□□ -1.5
AVT1YJR001W SSA4P22202 642 aaKnown RBP5.68□□□□□ -1.5
AVT1YJR001W PSD2P53037 1138 aaKnown RBP5.67□□□□□ -1.5
AVT1YJR001W PKC1P24583 1151 aa5.67□□□□□ -1.5
AVT1YJR001W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
AVT1YJR001W YAF9P53930 226 aa5.67□□□□□ -1.5
AVT1YJR001W MAK21Q12176 1025 aaKnown RBP5.67□□□□□ -1.5
AVT1YJR001W GLN1P32288 370 aaKnown RBP5.66□□□□□ -1.5
AVT1YJR001W DNA2P38859 1522 aa5.65□□□□□ -1.5
AVT1YJR001W BIM1P40013 344 aa5.65□□□□□ -1.5
AVT1YJR001W IES2P40154 320 aa5.65□□□□□ -1.5
AVT1YJR001W CDC3P32457 520 aaKnown RBP5.64□□□□□ -1.51
AVT1YJR001W ALD4P46367 519 aaKnown RBP5.64□□□□□ -1.51
AVT1YJR001W FPR4Q06205 392 aaPredicted RBP5.64□□□□□ -1.51
AVT1YJR001W BUD21Q08492 214 aaPredicted RBP5.64□□□□□ -1.51
AVT1YJR001W KOG1P38873 1557 aa5.63□□□□□ -1.51
AVT1YJR001W DEF1P35732 738 aaKnown RBP5.63□□□□□ -1.51
AVT1YJR001W NMD2P38798 1089 aaKnown RBP5.63□□□□□ -1.51
AVT1YJR001W REV3P14284 1504 aa5.63□□□□□ -1.51
AVT1YJR001W ATG32P40458 529 aa5.62□□□□□ -1.51
AVT1YJR001W UBX5Q06682 500 aa5.62□□□□□ -1.51
AVT1YJR001W PDR1P12383 1068 aa5.61□□□□□ -1.51
AVT1YJR001W RPL34AP87262 121 aaPredicted RBP5.61□□□□□ -1.51
AVT1YJR001W YJL007CP47080 104 aa5.6□□□□□ -1.51
AVT1YJR001W ATF2P53296 535 aa5.6□□□□□ -1.51
AVT1YJR001W NOB1Q08444 459 aaKnown RBP5.6□□□□□ -1.51
AVT1YJR001W NAB3P38996 802 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
AVT1YJR001W CST6P40535 587 aa5.6□□□□□ -1.51
AVT1YJR001W ITT1Q04638 464 aa5.6□□□□□ -1.51
AVT1YJR001W PSH1Q12161 406 aa5.6□□□□□ -1.51
AVT1YJR001W SIN3P22579 1536 aa5.59□□□□□ -1.51
AVT1YJR001W KEX1P09620 729 aa5.59□□□□□ -1.51
AVT1YJR001W RLP24Q07915 199 aaKnown RBP5.59□□□□□ -1.51
AVT1YJR001W CPS1P27614 576 aa5.58□□□□□ -1.52
AVT1YJR001W TOM20P35180 183 aa5.58□□□□□ -1.52
AVT1YJR001W THO2P53552 1597 aaKnown RBP5.58□□□□□ -1.52
AVT1YJR001W NNF1P47149 201 aa5.58□□□□□ -1.52
AVT1YJR001W ZDS1P50111 915 aaKnown RBP5.57□□□□□ -1.52
AVT1YJR001W HAT1Q12341 374 aa5.57□□□□□ -1.52
AVT1YJR001W SSK2P53599 1579 aa5.57□□□□□ -1.52
AVT1YJR001W TTI1P36097 1038 aa5.56□□□□□ -1.52
AVT1YJR001W ALD2P47771 506 aa5.56□□□□□ -1.52
AVT1YJR001W ERG12P07277 443 aa5.55□□□□□ -1.52
AVT1YJR001W TIF1P10081 395 aaKnown RBP5.55□□□□□ -1.52
AVT1YJR001W REF2P42073 533 aaPredicted RBP5.55□□□□□ -1.52
AVT1YJR001W RNH70P53331 553 aa5.55□□□□□ -1.52
AVT1YJR001W HIF1Q12373 385 aa5.55□□□□□ -1.52
AVT1YJR001W AI2P03876 854 aa5.54□□□□□ -1.52
AVT1YJR001W RCR1P38212 213 aa5.54□□□□□ -1.52
AVT1YJR001W IPL1P38991 367 aa5.54□□□□□ -1.52
AVT1YJR001W BUD4P47136 1447 aa5.54□□□□□ -1.52
AVT1YJR001W SSA2P10592 639 aaKnown RBP5.53□□□□□ -1.52
AVT1YJR001W TOA1P32773 286 aa5.53□□□□□ -1.52
AVT1YJR001W YKR023WP36119 530 aaKnown RBP5.53□□□□□ -1.52
AVT1YJR001W TAF2P23255 1407 aa5.53□□□□□ -1.52
AVT1YJR001W MAK11P20484 414 aaKnown RBP5.53□□□□□ -1.52
AVT1YJR001W ESP1Q03018 1630 aa5.52□□□□□ -1.53
AVT1YJR001W RRP15Q06511 250 aaPredicted RBP5.52□□□□□ -1.53
AVT1YJR001W PMC1P38929 1173 aaPredicted RBP5.51□□□□□ -1.53
AVT1YJR001W ECM5Q03214 1411 aa5.51□□□□□ -1.53
AVT1YJR001W COX6P00427 148 aa5.51□□□□□ -1.53
AVT1YJR001W RPL34BP40525 121 aaKnown RBP5.51□□□□□ -1.53
AVT1YJR001W ATG2P53855 1592 aa5.5□□□□□ -1.53
AVT1YJR001W STM1P39015 273 aaKnown RBP5.5□□□□□ -1.53
AVT1YJR001W CSN12P47130 423 aa5.5□□□□□ -1.53
AVT1YJR001W YML083CQ04526 418 aa5.5□□□□□ -1.53
AVT1YJR001W SVF1Q05515 481 aa5.5□□□□□ -1.53
AVT1YJR001W TSR4P25040 408 aa5.49□□□□□ -1.53
AVT1YJR001W RPS0AP32905 252 aaKnown RBP5.49□□□□□ -1.53
AVT1YJR001W FPR3P38911 411 aaKnown RBP5.49□□□□□ -1.53
AVT1YJR001W KIP3P53086 805 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms