RNA–Protein interactions for RNA: YJL179W

PFD1, Transcript of Subunit of heterohexameric prefoldin, yeastyeast

Gene PFD1, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFD1YJL179W DPS1P04802 557 aaKnown RBP7.25□□□□□ -1.25
PFD1YJL179W YEL023CP39992 682 aa7.24□□□□□ -1.25
PFD1YJL179W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.24□□□□□ -1.25not detected
PFD1YJL179W DCW1P36091 449 aa7.21□□□□□ -1.26
PFD1YJL179W ELP4Q02884 456 aaKnown RBP7.17□□□□□ -1.26
PFD1YJL179W RGA1P39083 1007 aa7.15□□□□□ -1.26
PFD1YJL179W TFA1P36100 482 aa7.12□□□□□ -1.27
PFD1YJL179W PML39Q03760 334 aa7.12□□□□□ -1.27
PFD1YJL179W CST9Q06032 482 aa7.12□□□□□ -1.27
PFD1YJL179W SSP1P38871 571 aa7.1□□□□□ -1.27
PFD1YJL179W YDR344CQ05510 147 aa7.1□□□□□ -1.27
PFD1YJL179W MGA2P40578 1113 aa7.09□□□□□ -1.27
PFD1YJL179W ARH1P48360 493 aa7.08□□□□□ -1.28
PFD1YJL179W RCR1P38212 213 aa7.05□□□□□ -1.28
PFD1YJL179W SRC1Q03707 834 aa7.05□□□□□ -1.28
PFD1YJL179W GRE2Q12068 342 aaKnown RBP7.02□□□□□ -1.29
PFD1YJL179W SPT23P35210 1082 aa7.01□□□□□ -1.29
PFD1YJL179W MID1P41821 548 aa6.93□□□□□ -1.3
PFD1YJL179W PEX29Q03370 554 aa6.93□□□□□ -1.3
PFD1YJL179W GUT1P32190 709 aa6.91□□□□□ -1.3
PFD1YJL179W ATH1P48016 1211 aa6.91□□□□□ -1.3
PFD1YJL179W HAP5Q02516 242 aa6.9□□□□□ -1.3
PFD1YJL179W YML082WQ04533 649 aaKnown RBP6.9□□□□□ -1.3
PFD1YJL179W BNI4P53858 892 aa6.89□□□□□ -1.31
PFD1YJL179W PTC2P39966 464 aaKnown RBP6.87□□□□□ -1.31
PFD1YJL179W NST1P53935 1240 aa6.85□□□□□ -1.31
PFD1YJL179W AI4P03878 556 aa6.82□□□□□ -1.32
PFD1YJL179W MPH3P0CE00 602 aa6.82□□□□□ -1.32
PFD1YJL179W PTC3P34221 468 aaKnown RBP6.82□□□□□ -1.32
PFD1YJL179W MIF2P35201 549 aa6.82□□□□□ -1.32
PFD1YJL179W RAS1P01119 309 aa6.78□□□□□ -1.32
PFD1YJL179W MAK11P20484 414 aaKnown RBP6.76□□□□□ -1.33
PFD1YJL179W SOL3P38858 249 aa6.76□□□□□ -1.33
PFD1YJL179W TRK1P12685 1235 aa6.75□□□□□ -1.33
PFD1YJL179W EDS1P38073 919 aa6.75□□□□□ -1.33
PFD1YJL179W MPC54Q08550 464 aa6.73□□□□□ -1.33
PFD1YJL179W NMA111P53920 997 aa6.71□□□□□ -1.34
PFD1YJL179W AMS1P22855 1083 aa6.69□□□□□ -1.34
PFD1YJL179W ILV3P39522 585 aaKnown RBP6.69□□□□□ -1.34
PFD1YJL179W YPL062WQ02781 134 aa6.68□□□□□ -1.34
PFD1YJL179W COQ8P27697 501 aa6.64□□□□□ -1.35
PFD1YJL179W DPL1Q05567 589 aa6.64□□□□□ -1.35
PFD1YJL179W GYP1Q08484 637 aa6.63□□□□□ -1.35
PFD1YJL179W YGR273CP53329 174 aa6.62□□□□□ -1.35
PFD1YJL179W YPR015CQ12531 247 aa6.62□□□□□ -1.35
PFD1YJL179W RAM2P29703 316 aa6.6□□□□□ -1.35
PFD1YJL179W RAM1P22007 431 aa6.58□□□□□ -1.36
PFD1YJL179W SLI15P38283 698 aa6.58□□□□□ -1.36
PFD1YJL179W SAS4Q04003 481 aa6.58□□□□□ -1.36
PFD1YJL179W NOP53Q12080 455 aaKnown RBP6.57□□□□□ -1.36
PFD1YJL179W ISU2Q12056 156 aa6.56□□□□□ -1.36
PFD1YJL179W YEL077CQ3E7X8 1277 aa6.54□□□□□ -1.36
PFD1YJL179W SDH2P21801 266 aa6.5□□□□□ -1.37
PFD1YJL179W GBP2P25555 427 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
PFD1YJL179W MRF1P30775 413 aaPredicted RBP6.47□□□□□ -1.37
PFD1YJL179W BRE2P43132 505 aa6.45□□□□□ -1.38
PFD1YJL179W GCR2Q01722 534 aa6.45□□□□□ -1.38
PFD1YJL179W GAR1P28007 205 aaKnown RBP6.43□□□□□ -1.38
PFD1YJL179W PDR1P12383 1068 aa6.41□□□□□ -1.38
PFD1YJL179W KEX1P09620 729 aa6.4□□□□□ -1.38
PFD1YJL179W CDC73Q06697 393 aa6.4□□□□□ -1.38
PFD1YJL179W ERG12P07277 443 aa6.34□□□□□ -1.39
PFD1YJL179W RPP1BP10622 106 aaKnown RBP6.34□□□□□ -1.39
PFD1YJL179W PRT1P06103 763 aaKnown RBP6.32□□□□□ -1.4
PFD1YJL179W AIR1P40507 360 aaKnown RBP6.3□□□□□ -1.4
PFD1YJL179W BUD20Q08004 166 aaPredicted RBP6.29□□□□□ -1.4
PFD1YJL179W YLR326WQ06170 240 aaKnown RBP6.25□□□□□ -1.41
PFD1YJL179W ENV9Q08651 330 aa6.25□□□□□ -1.41
PFD1YJL179W MET22P32179 357 aa6.24□□□□□ -1.41
PFD1YJL179W CST6P40535 587 aa6.24□□□□□ -1.41
PFD1YJL179W CDC4P07834 779 aa6.23□□□□□ -1.41
PFD1YJL179W UBP14P38237 781 aaKnown RBP6.23□□□□□ -1.41
PFD1YJL179W PCS60P38137 543 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
PFD1YJL179W CLA4P48562 842 aa6.22□□□□□ -1.41
PFD1YJL179W RAD54P32863 898 aa6.21□□□□□ -1.42
PFD1YJL179W LAM6Q08001 693 aa6.21□□□□□ -1.42
PFD1YJL179W STR2P47164 639 aa6.2□□□□□ -1.42
PFD1YJL179W VHR2P40041 505 aa6.19□□□□□ -1.42
PFD1YJL179W PEX21P50091 288 aa6.19□□□□□ -1.42
PFD1YJL179W YRR1Q12172 810 aa6.19□□□□□ -1.42
PFD1YJL179W SPT16P32558 1035 aaKnown RBP6.17□□□□□ -1.42
PFD1YJL179W ISM1P48526 1002 aa6.17□□□□□ -1.42
PFD1YJL179W YDR444WQ04093 687 aa6.17□□□□□ -1.42
PFD1YJL179W NPL4P33755 580 aa6.15□□□□□ -1.42
PFD1YJL179W NUD1P32336 851 aa6.14□□□□□ -1.43
PFD1YJL179W FRK1Q03002 865 aaPredicted RBP6.13□□□□□ -1.43
PFD1YJL179W TFB4Q12004 338 aa6.13□□□□□ -1.43
PFD1YJL179W HED1Q03937 162 aa6.11□□□□□ -1.43
PFD1YJL179W CSC1Q06538 782 aa6.11□□□□□ -1.43
PFD1YJL179W LCB5Q06147 687 aaKnown RBP6.1□□□□□ -1.43
PFD1YJL179W GAP1P19145 602 aaPredicted RBP6.09□□□□□ -1.43
PFD1YJL179W GCD11P32481 527 aaKnown RBP6.09□□□□□ -1.43
PFD1YJL179W MTC5Q03897 1148 aa6.09□□□□□ -1.43
PFD1YJL179W TUM1Q08686 304 aaKnown RBP6.09□□□□□ -1.43
PFD1YJL179W YDL176WQ12027 708 aa6.09□□□□□ -1.43
PFD1YJL179W BDP1P46678 594 aa6.08□□□□□ -1.44
PFD1YJL179W KIC1P38692 1080 aa6.07□□□□□ -1.44
PFD1YJL179W TY1A-DR4O74302 440 aa6.06□□□□□ -1.44
PFD1YJL179W TY1A-HP0C2I4 478 aaKnown RBP6.06□□□□□ -1.44
PFD1YJL179W TY1A-AP0CX57 440 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms