RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI3YJL176C SNQ2P32568 1501 aaKnown RBP7.33□□□□□ -1.24
SWI3YJL176C STH1P32597 1359 aa7.32□□□□□ -1.24
SWI3YJL176C GEA2P39993 1459 aaKnown RBP7.32□□□□□ -1.24
SWI3YJL176C YRF1-1P0CX20 1796 aa7.32□□□□□ -1.24
SWI3YJL176C YRF1-5P0CX21 1796 aa7.32□□□□□ -1.24
SWI3YJL176C YRF1-8P0CX22 1796 aa7.32□□□□□ -1.24
SWI3YJL176C VPS15P22219 1454 aa7.3□□□□□ -1.24
SWI3YJL176C SNT2P53127 1403 aa7.29□□□□□ -1.24
SWI3YJL176C MLP2P40457 1679 aa7.26□□□□□ -1.25
SWI3YJL176C SAS10Q12136 610 aaPredicted RBP7.25□□□□□ -1.25
SWI3YJL176C ULS1Q08562 1619 aa7.24□□□□□ -1.25
SWI3YJL176C RTT106P40161 455 aa7.23□□□□□ -1.25
SWI3YJL176C PDR15Q04182 1529 aaKnown RBP7.23□□□□□ -1.25
SWI3YJL176C BNI1P41832 1953 aa7.23□□□□□ -1.25
SWI3YJL176C TAF7Q05021 590 aa7.22□□□□□ -1.25
SWI3YJL176C DRS2P39524 1355 aa7.22□□□□□ -1.25
SWI3YJL176C MET10P39692 1035 aa7.21□□□□□ -1.25
SWI3YJL176C ITT1Q04638 464 aa7.2□□□□□ -1.26
SWI3YJL176C PDR12Q02785 1511 aa7.2□□□□□ -1.26
SWI3YJL176C SPO14P36126 1683 aa7.2□□□□□ -1.26
SWI3YJL176C NUP170P38181 1502 aa7.18□□□□□ -1.26
SWI3YJL176C IRC20Q06554 1556 aa7.17□□□□□ -1.26
SWI3YJL176C GDB1Q06625 1536 aa7.16□□□□□ -1.26
SWI3YJL176C MMS1Q06211 1407 aa7.16□□□□□ -1.26
SWI3YJL176C IFH1P39520 1085 aa7.14□□□□□ -1.27
SWI3YJL176C NUP157P40064 1391 aaKnown RBP7.14□□□□□ -1.27
SWI3YJL176C IQG1Q12280 1495 aa7.12□□□□□ -1.27
SWI3YJL176C GEA1P47102 1408 aaPredicted RBP7.12□□□□□ -1.27
SWI3YJL176C PDR10P51533 1564 aa7.1□□□□□ -1.27
SWI3YJL176C BUD3P25558 1636 aa7.09□□□□□ -1.27
SWI3YJL176C TRM3Q07527 1436 aa7.09□□□□□ -1.27
SWI3YJL176C CAT8P39113 1433 aa7.09□□□□□ -1.27
SWI3YJL176C DOP1Q03921 1698 aa7.08□□□□□ -1.28
SWI3YJL176C TY3B-GQ99315 1547 aa7.07□□□□□ -1.28
SWI3YJL176C YBT1P32386 1661 aa7.06□□□□□ -1.28
SWI3YJL176C DNF2Q12675 1612 aa7.06□□□□□ -1.28
SWI3YJL176C ABP1P15891 592 aaKnown RBP7.05□□□□□ -1.28
SWI3YJL176C MIF2P35201 549 aa7.04□□□□□ -1.28
SWI3YJL176C ARO1P08566 1588 aaKnown RBP7.02□□□□□ -1.29
SWI3YJL176C CHC1P22137 1653 aaKnown RBP7□□□□□ -1.29
SWI3YJL176C CKB1P43639 278 aa6.99□□□□□ -1.29
SWI3YJL176C YSP2Q06681 1438 aa6.97□□□□□ -1.29
SWI3YJL176C BNR1P40450 1375 aa6.95□□□□□ -1.3
SWI3YJL176C SRB8P25648 1427 aa6.94□□□□□ -1.3
SWI3YJL176C SEC7P11075 2009 aaKnown RBP6.93□□□□□ -1.3
SWI3YJL176C YOR093CQ12275 1648 aa6.92□□□□□ -1.3
SWI3YJL176C IKI3Q06706 1349 aaKnown RBP6.9□□□□□ -1.31
SWI3YJL176C BUD21Q08492 214 aaPredicted RBP6.86□□□□□ -1.31
SWI3YJL176C DNF3Q12674 1656 aa6.85□□□□□ -1.31
SWI3YJL176C YAP3P38749 330 aa6.84□□□□□ -1.32
SWI3YJL176C URN1Q06525 465 aaKnown RBP6.83□□□□□ -1.32
SWI3YJL176C SSM4P40318 1319 aa6.82□□□□□ -1.32
SWI3YJL176C YFR006WP43590 535 aa6.81□□□□□ -1.32
SWI3YJL176C NUP188P52593 1655 aaKnown RBP6.8□□□□□ -1.32
SWI3YJL176C VMR1P38735 1592 aa6.76□□□□□ -1.33
SWI3YJL176C IPL1P38991 367 aa6.75□□□□□ -1.33
SWI3YJL176C GCN2P15442 1659 aa6.74□□□□□ -1.33
SWI3YJL176C IML1P47170 1584 aa6.74□□□□□ -1.33
SWI3YJL176C MAK10Q02197 733 aa6.74□□□□□ -1.33
SWI3YJL176C HAP1P0CE41 1502 aa6.74□□□□□ -1.33
SWI3YJL176C PDR5P33302 1511 aaKnown RBP6.73□□□□□ -1.33
SWI3YJL176C TYS1P36421 394 aaKnown RBP6.71□□□□□ -1.34
SWI3YJL176C USO1P25386 1790 aa6.66□□□□□ -1.34
SWI3YJL176C PDR11P40550 1411 aa6.66□□□□□ -1.34
SWI3YJL176C PAF1P38351 445 aa6.65□□□□□ -1.35
SWI3YJL176C TY1B-NL2Q99337 1749 aaKnown RBP6.64□□□□□ -1.35
SWI3YJL176C RAV1P47104 1357 aa6.62□□□□□ -1.35
SWI3YJL176C YMR196WQ04336 1088 aa6.61□□□□□ -1.35
SWI3YJL176C NOP7P53261 605 aaKnown RBP6.59□□□□□ -1.35
SWI3YJL176C BFR2Q06631 534 aaKnown RBP6.59□□□□□ -1.35
SWI3YJL176C RTC1Q08281 1341 aa6.57□□□□□ -1.36
SWI3YJL176C THI12P42883 340 aa6.57□□□□□ -1.36
SWI3YJL176C THI5P43534 340 aa6.57□□□□□ -1.36
SWI3YJL176C THI11P47183 340 aa6.57□□□□□ -1.36
SWI3YJL176C THI13Q07748 340 aa6.57□□□□□ -1.36
SWI3YJL176C MRX12P47084 519 aa6.56□□□□□ -1.36
SWI3YJL176C BCK1Q01389 1478 aa6.56□□□□□ -1.36
SWI3YJL176C KRE5P22023 1365 aa6.56□□□□□ -1.36
SWI3YJL176C CFT1Q06632 1357 aaKnown RBP6.55□□□□□ -1.36
SWI3YJL176C RIA1P53893 1110 aa6.54□□□□□ -1.36
SWI3YJL176C NUP192P47054 1683 aa6.54□□□□□ -1.36
SWI3YJL176C RAD9P14737 1309 aa6.51□□□□□ -1.37
SWI3YJL176C ALD4P46367 519 aaKnown RBP6.51□□□□□ -1.37
SWI3YJL176C CAB1Q04430 367 aa6.51□□□□□ -1.37
SWI3YJL176C YNR029CP53729 429 aaKnown RBP6.5□□□□□ -1.37
SWI3YJL176C ESL2P36168 1195 aa6.48□□□□□ -1.37
SWI3YJL176C NAP1P25293 417 aaKnown RBP6.47□□□□□ -1.37
SWI3YJL176C TAF5P38129 798 aa6.47□□□□□ -1.37
SWI3YJL176C TAF8Q03750 510 aa6.43□□□□□ -1.38
SWI3YJL176C TY3B-IQ7LHG5 1498 aaKnown RBP6.43□□□□□ -1.38
SWI3YJL176C PTP3P40048 928 aa6.41□□□□□ -1.38
SWI3YJL176C YAH1Q12184 172 aaKnown RBP6.39□□□□□ -1.39
SWI3YJL176C KIP3P53086 805 aaKnown RBP6.38□□□□□ -1.39
SWI3YJL176C SPE2P21182 396 aa6.38□□□□□ -1.39
SWI3YJL176C RCM1P53972 490 aa6.38□□□□□ -1.39
SWI3YJL176C CPS1P27614 576 aa6.37□□□□□ -1.39
SWI3YJL176C YLR419WQ06698 1435 aaKnown RBP6.35□□□□□ -1.39
SWI3YJL176C PSK1P31374 1356 aa6.35□□□□□ -1.39
SWI3YJL176C SCT1P32784 759 aa6.35□□□□□ -1.39
SWI3YJL176C PPH3P32345 308 aa6.34□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 41 ms