RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeastyeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPS1YJL172W TY1B-ML1Q04711 1755 aaKnown RBP6.86□□□□□ -1.31
CPS1YJL172W TY1B-GR2Q12269 1755 aa6.86□□□□□ -1.31
CPS1YJL172W TY1B-OLQ12273 1755 aa6.86□□□□□ -1.31
CPS1YJL172W TY1B-PLQ12414 1755 aaKnown RBP6.86□□□□□ -1.31
CPS1YJL172W ESC1Q03661 1658 aaKnown RBP6.86□□□□□ -1.31
CPS1YJL172W TSR3Q12094 313 aaKnown RBP6.85□□□□□ -1.31
CPS1YJL172W RTT106P40161 455 aa6.84□□□□□ -1.31
CPS1YJL172W VTH1P40438 1549 aa6.83□□□□□ -1.32
CPS1YJL172W VTH2P40890 1549 aa6.83□□□□□ -1.32
CPS1YJL172W RIM101P33400 625 aa6.82□□□□□ -1.32
CPS1YJL172W SIS2P36024 562 aa6.81□□□□□ -1.32
CPS1YJL172W RPA190P10964 1664 aaKnown RBP6.81□□□□□ -1.32
CPS1YJL172W EBP2P36049 427 aaKnown RBP6.8□□□□□ -1.32
CPS1YJL172W SNQ2P32568 1501 aaKnown RBP6.8□□□□□ -1.32
CPS1YJL172W NUP159P40477 1460 aa6.79□□□□□ -1.32
CPS1YJL172W MET10P39692 1035 aa6.78□□□□□ -1.32
CPS1YJL172W IFH1P39520 1085 aa6.77□□□□□ -1.33
CPS1YJL172W SNT2P53127 1403 aa6.77□□□□□ -1.33
CPS1YJL172W LTE1P07866 1435 aa6.76□□□□□ -1.33
CPS1YJL172W CAB3P36076 571 aa6.76□□□□□ -1.33
CPS1YJL172W NOP2P40991 618 aaKnown RBP6.75□□□□□ -1.33
CPS1YJL172W TY1B-JR2P47100 1755 aaKnown RBP6.74□□□□□ -1.33
CPS1YJL172W TY1B-ER2Q03619 1755 aa6.74□□□□□ -1.33
CPS1YJL172W TY1B-MR1Q04214 1755 aa6.74□□□□□ -1.33
CPS1YJL172W TY1B-MR2Q04670 1755 aaKnown RBP6.74□□□□□ -1.33
CPS1YJL172W TY1B-LR1Q12088 1755 aaKnown RBP6.74□□□□□ -1.33
CPS1YJL172W TY1B-NL1Q12112 1755 aa6.74□□□□□ -1.33
CPS1YJL172W TY1B-GR1Q12141 1755 aa6.74□□□□□ -1.33
CPS1YJL172W TY1B-BLQ12490 1755 aa6.74□□□□□ -1.33
CPS1YJL172W PTP3P40048 928 aa6.73□□□□□ -1.33
CPS1YJL172W NTE1Q04958 1679 aa6.72□□□□□ -1.33
CPS1YJL172W GEA2P39993 1459 aaKnown RBP6.71□□□□□ -1.33
CPS1YJL172W PDR15Q04182 1529 aaKnown RBP6.71□□□□□ -1.34
CPS1YJL172W VPS15P22219 1454 aa6.71□□□□□ -1.34
CPS1YJL172W MLP2P40457 1679 aa6.7□□□□□ -1.34
CPS1YJL172W RPO21P04050 1733 aaKnown RBP6.7□□□□□ -1.34
CPS1YJL172W LEO1P38439 464 aa6.7□□□□□ -1.34
CPS1YJL172W DMA1P38823 416 aa6.7□□□□□ -1.34
CPS1YJL172W GEA1P47102 1408 aaPredicted RBP6.68□□□□□ -1.34
CPS1YJL172W OXP1P28273 1286 aa6.67□□□□□ -1.34
CPS1YJL172W ULS1Q08562 1619 aa6.66□□□□□ -1.34
CPS1YJL172W DRS2P39524 1355 aa6.66□□□□□ -1.34
CPS1YJL172W YRF1-1P0CX20 1796 aa6.66□□□□□ -1.34
CPS1YJL172W YRF1-5P0CX21 1796 aa6.66□□□□□ -1.34
CPS1YJL172W YRF1-8P0CX22 1796 aa6.66□□□□□ -1.34
CPS1YJL172W ITT1Q04638 464 aa6.64□□□□□ -1.35
CPS1YJL172W PDR12Q02785 1511 aa6.64□□□□□ -1.35
CPS1YJL172W NUP157P40064 1391 aaKnown RBP6.64□□□□□ -1.35
CPS1YJL172W CAT8P39113 1433 aa6.64□□□□□ -1.35
CPS1YJL172W YFR016CP43597 1233 aaKnown RBP6.64□□□□□ -1.35
CPS1YJL172W YKR023WP36119 530 aaKnown RBP6.63□□□□□ -1.35
CPS1YJL172W CKB1P43639 278 aa6.61□□□□□ -1.35
CPS1YJL172W SPO14P36126 1683 aa6.59□□□□□ -1.35
CPS1YJL172W IRC20Q06554 1556 aa6.59□□□□□ -1.35
CPS1YJL172W IKI3Q06706 1349 aaKnown RBP6.59□□□□□ -1.35
CPS1YJL172W GDB1Q06625 1536 aa6.59□□□□□ -1.35
CPS1YJL172W IQG1Q12280 1495 aa6.59□□□□□ -1.35
CPS1YJL172W SSP1P38871 571 aa6.59□□□□□ -1.36
CPS1YJL172W NUP170P38181 1502 aa6.58□□□□□ -1.36
CPS1YJL172W BUD3P25558 1636 aa6.58□□□□□ -1.36
CPS1YJL172W PDR10P51533 1564 aa6.58□□□□□ -1.36
CPS1YJL172W MMS1Q06211 1407 aa6.55□□□□□ -1.36
CPS1YJL172W YRB30P53107 440 aaPredicted RBP6.55□□□□□ -1.36
CPS1YJL172W YAH1Q12184 172 aaKnown RBP6.55□□□□□ -1.36
CPS1YJL172W BNI1P41832 1953 aa6.54□□□□□ -1.36
CPS1YJL172W TY3B-GQ99315 1547 aa6.54□□□□□ -1.36
CPS1YJL172W TRM3Q07527 1436 aa6.53□□□□□ -1.36
CPS1YJL172W NSR1P27476 414 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
CPS1YJL172W SRB8P25648 1427 aa6.52□□□□□ -1.37
CPS1YJL172W ABP1P15891 592 aaKnown RBP6.52□□□□□ -1.37
CPS1YJL172W BUD21Q08492 214 aaPredicted RBP6.52□□□□□ -1.37
CPS1YJL172W RPS0BP46654 252 aaKnown RBP6.5□□□□□ -1.37
CPS1YJL172W BNR1P40450 1375 aa6.5□□□□□ -1.37
CPS1YJL172W YBT1P32386 1661 aa6.5□□□□□ -1.37
CPS1YJL172W YLR271WQ06152 274 aa6.5□□□□□ -1.37
CPS1YJL172W YSP2Q06681 1438 aa6.49□□□□□ -1.37
CPS1YJL172W ARO1P08566 1588 aaKnown RBP6.49□□□□□ -1.37
CPS1YJL172W HOP09932 586 aa6.49□□□□□ -1.37
CPS1YJL172W BUD31P25337 157 aaPredicted RBP6.49□□□□□ -1.37
CPS1YJL172W MRPL32P25348 183 aa6.49□□□□□ -1.37
CPS1YJL172W NAP1P25293 417 aaKnown RBP6.47□□□□□ -1.37
CPS1YJL172W DCD1P06773 312 aa6.47□□□□□ -1.37
CPS1YJL172W DOP1Q03921 1698 aa6.46□□□□□ -1.37
CPS1YJL172W KRI1P42846 591 aaKnown RBP6.46□□□□□ -1.38
CPS1YJL172W TFC8Q12308 588 aa6.46□□□□□ -1.38
CPS1YJL172W SSM4P40318 1319 aa6.46□□□□□ -1.38
CPS1YJL172W SEC7P11075 2009 aaKnown RBP6.45□□□□□ -1.38
CPS1YJL172W YIL055CP40523 627 aaKnown RBP6.45□□□□□ -1.38
CPS1YJL172W IOC4Q04213 475 aa6.45□□□□□ -1.38
CPS1YJL172W CDC27P38042 758 aa6.44□□□□□ -1.38
CPS1YJL172W YAP3P38749 330 aa6.42□□□□□ -1.38
CPS1YJL172W MIF2P35201 549 aa6.41□□□□□ -1.38
CPS1YJL172W RSM7P47150 247 aa6.39□□□□□ -1.39
CPS1YJL172W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
CPS1YJL172W DNF2Q12675 1612 aa6.39□□□□□ -1.39
CPS1YJL172W CHC1P22137 1653 aaKnown RBP6.37□□□□□ -1.39
CPS1YJL172W PAF1P38351 445 aa6.36□□□□□ -1.39
CPS1YJL172W IPL1P38991 367 aa6.35□□□□□ -1.39
CPS1YJL172W CST9Q06032 482 aa6.33□□□□□ -1.4
CPS1YJL172W NOP7P53261 605 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 74.8 ms