RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C TGL3P40308 642 aa9.39□□□□□ -0.91
YIR043CYIR043C ATH1P48016 1211 aa9.39□□□□□ -0.91
YIR043CYIR043C HGH1P48362 394 aaKnown RBP9.39□□□□□ -0.91
YIR043CYIR043C GRE2Q12068 342 aaKnown RBP9.36□□□□□ -0.91
YIR043CYIR043C GUA1P38625 525 aaKnown RBP9.35□□□□□ -0.91
YIR043CYIR043C GUT1P32190 709 aa9.34□□□□□ -0.91
YIR043CYIR043C UBP14P38237 781 aaKnown RBP9.34□□□□□ -0.91
YIR043CYIR043C YDR090CQ03193 310 aa9.33□□□□□ -0.92
YIR043CYIR043C KIC1P38692 1080 aa9.31□□□□□ -0.92
YIR043CYIR043C YLR326WQ06170 240 aaKnown RBP9.31□□□□□ -0.92
YIR043CYIR043C YGR273CP53329 174 aa9.27□□□□□ -0.93
YIR043CYIR043C SAM3Q08986 587 aa9.26□□□□□ -0.93
YIR043CYIR043C GYP5Q12344 894 aa9.26□□□□□ -0.93
YIR043CYIR043C RAD54P32863 898 aa9.25□□□□□ -0.93
YIR043CYIR043C GTT3P39996 337 aa9.23□□□□□ -0.93
YIR043CYIR043C HPC2Q01448 625 aa9.23□□□□□ -0.93
YIR043CYIR043C KEX1P09620 729 aa9.22□□□□□ -0.93
YIR043CYIR043C PCS60P38137 543 aaKnown RBP RIP-Chip data9.21□□□□□ -0.94not detected
YIR043CYIR043C SOL3P38858 249 aa9.21□□□□□ -0.94
YIR043CYIR043C TFB3Q03290 321 aa9.2□□□□□ -0.94
YIR043CYIR043C PSE1P32337 1089 aaKnown RBP9.19□□□□□ -0.94
YIR043CYIR043C DCW1P36091 449 aa9.19□□□□□ -0.94
YIR043CYIR043C MST1P07236 462 aa9.15□□□□□ -0.94
YIR043CYIR043C BRL1P38770 471 aa9.15□□□□□ -0.94
YIR043CYIR043C CSN12P47130 423 aa9.14□□□□□ -0.95
YIR043CYIR043C SSA2P10592 639 aaKnown RBP9.13□□□□□ -0.95
YIR043CYIR043C YOL036WQ08206 761 aa9.13□□□□□ -0.95
YIR043CYIR043C SET4P42948 560 aa9.12□□□□□ -0.95
YIR043CYIR043C TEA1P47988 759 aa9.11□□□□□ -0.95
YIR043CYIR043C PKC1P24583 1151 aa9.1□□□□□ -0.95
YIR043CYIR043C ORC6P38826 435 aa9.1□□□□□ -0.95
YIR043CYIR043C HTA1P04911 132 aaKnown RBP9.09□□□□□ -0.95
YIR043CYIR043C HTA2P04912 132 aa9.09□□□□□ -0.95
YIR043CYIR043C NST1P53935 1240 aa9.09□□□□□ -0.95
YIR043CYIR043C MPH3P0CE00 602 aa9.05□□□□□ -0.96
YIR043CYIR043C AI4P03878 556 aa9.04□□□□□ -0.96
YIR043CYIR043C RGR1P19263 1082 aa9.04□□□□□ -0.96
YIR043CYIR043C ILV3P39522 585 aaKnown RBP9.04□□□□□ -0.96
YIR043CYIR043C YJL007CP47080 104 aa9.04□□□□□ -0.96
YIR043CYIR043C TYW1Q08960 810 aaKnown RBP9.03□□□□□ -0.96
YIR043CYIR043C KTR1P27810 393 aaKnown RBP9.01□□□□□ -0.97
YIR043CYIR043C BIM1P40013 344 aa9.01□□□□□ -0.97
YIR043CYIR043C MVP1P40959 511 aaKnown RBP9.01□□□□□ -0.97
YIR043CYIR043C CLB5P30283 435 aa9□□□□□ -0.97
YIR043CYIR043C MSB4Q12317 492 aa9□□□□□ -0.97
YIR043CYIR043C WSC3Q12215 556 aa8.99□□□□□ -0.97
YIR043CYIR043C SLI15P38283 698 aa8.98□□□□□ -0.97
YIR043CYIR043C YEL023CP39992 682 aa8.98□□□□□ -0.97
YIR043CYIR043C RPP1BP10622 106 aaKnown RBP8.97□□□□□ -0.97
YIR043CYIR043C DAN4P47179 1161 aa8.97□□□□□ -0.97
YIR043CYIR043C GLN1P32288 370 aaKnown RBP8.96□□□□□ -0.98
YIR043CYIR043C ATG32P40458 529 aa8.96□□□□□ -0.98
YIR043CYIR043C YMR196WQ04336 1088 aa8.96□□□□□ -0.98
YIR043CYIR043C YPR109WQ06104 294 aa8.96□□□□□ -0.98
YIR043CYIR043C CSC1Q06538 782 aa8.96□□□□□ -0.98
YIR043CYIR043C NIS1P53939 407 aa8.95□□□□□ -0.98
YIR043CYIR043C GAP1P19145 602 aaPredicted RBP8.94□□□□□ -0.98
YIR043CYIR043C YBL036CP38197 257 aa8.94□□□□□ -0.98
YIR043CYIR043C FPK1P53739 893 aa8.94□□□□□ -0.98
YIR043CYIR043C RPL34BP40525 121 aaKnown RBP8.93□□□□□ -0.98
YIR043CYIR043C CDC73Q06697 393 aa8.92□□□□□ -0.98
YIR043CYIR043C EAP1P36041 632 aaKnown RBP8.91□□□□□ -0.98
YIR043CYIR043C HST2P53686 357 aa8.91□□□□□ -0.98
YIR043CYIR043C PKH3Q03306 898 aaPredicted RBP8.91□□□□□ -0.98
YIR043CYIR043C MMP1Q12372 583 aa8.91□□□□□ -0.98
YIR043CYIR043C PTC4P38089 393 aa8.9□□□□□ -0.98
YIR043CYIR043C PEX21P50091 288 aa8.9□□□□□ -0.98
YIR043CYIR043C TRP5P00931 707 aaKnown RBP8.89□□□□□ -0.99
YIR043CYIR043C ESS1P22696 170 aa8.89□□□□□ -0.99
YIR043CYIR043C SCJ1P25303 377 aa8.89□□□□□ -0.99
YIR043CYIR043C SUB2Q07478 446 aaKnown RBP8.89□□□□□ -0.99
YIR043CYIR043C TFB4Q12004 338 aa8.89□□□□□ -0.99
YIR043CYIR043C TIF1P10081 395 aaKnown RBP8.88□□□□□ -0.99
YIR043CYIR043C RAD59Q12223 238 aa8.87□□□□□ -0.99
YIR043CYIR043C ERG12P07277 443 aa8.86□□□□□ -0.99
YIR043CYIR043C SSA1P10591 642 aaKnown RBP8.86□□□□□ -0.99
YIR043CYIR043C BIO2P32451 375 aa8.85□□□□□ -0.99
YIR043CYIR043C TUM1Q08686 304 aaKnown RBP8.85□□□□□ -0.99
YIR043CYIR043C YJU3P28321 313 aa8.84□□□□□ -0.99
YIR043CYIR043C JIP4Q03361 876 aa8.84□□□□□ -0.99
YIR043CYIR043C YPR204WQ08995 1032 aa8.83□□□□□ -1
YIR043CYIR043C ARG8P18544 423 aa8.82□□□□□ -1
YIR043CYIR043C SIT4P20604 311 aa8.82□□□□□ -1
YIR043CYIR043C SSA4P22202 642 aaKnown RBP8.82□□□□□ -1
YIR043CYIR043C GEF1P37020 779 aa8.82□□□□□ -1
YIR043CYIR043C YNL108CP53929 270 aa8.82□□□□□ -1
YIR043CYIR043C YBL029C-AQ3E756 94 aa8.82□□□□□ -1
YIR043CYIR043C RTG2P32608 588 aaKnown RBP8.81□□□□□ -1
YIR043CYIR043C CSE4P36012 229 aa8.81□□□□□ -1
YIR043CYIR043C ULI1P43604 169 aa8.81□□□□□ -1
YIR043CYIR043C CPS1P27614 576 aa8.79□□□□□ -1
YIR043CYIR043C MID1P41821 548 aa8.79□□□□□ -1
YIR043CYIR043C VNX1P42839 908 aa8.79□□□□□ -1
YIR043CYIR043C DPL1Q05567 589 aa8.78□□□□□ -1
YIR043CYIR043C YRR1Q12172 810 aa8.78□□□□□ -1
YIR043CYIR043C SLY41P22215 453 aa8.77□□□□□ -1.01
YIR043CYIR043C TIF11P38912 153 aaKnown RBP8.77□□□□□ -1.01
YIR043CYIR043C YML020WQ03722 664 aa8.77□□□□□ -1.01
YIR043CYIR043C PML39Q03760 334 aa8.77□□□□□ -1.01
YIR043CYIR043C SLX8P40072 274 aa8.76□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms