RNA–Protein interactions for RNA: YHR038W

RRF1, Transcript of Mitochondrial ribosome recycling factor, yeastyeast

Gene RRF1, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRF1YHR038W HTA2P04912 132 aa10.21□□□□□ -0.77
RRF1YHR038W ABP1P15891 592 aaKnown RBP10.21□□□□□ -0.77
RRF1YHR038W PRE3P38624 215 aa10.21□□□□□ -0.77
RRF1YHR038W YEL023CP39992 682 aa10.18□□□□□ -0.78
RRF1YHR038W PTC4P38089 393 aa10.17□□□□□ -0.78
RRF1YHR038W YDR344CQ05510 147 aa10.11□□□□□ -0.79
RRF1YHR038W VRP1P37370 817 aa10.04□□□□□ -0.8
RRF1YHR038W PML39Q03760 334 aa10.01□□□□□ -0.81
RRF1YHR038W XDJ1P39102 459 aa10□□□□□ -0.81
RRF1YHR038W ELP4Q02884 456 aaKnown RBP9.97□□□□□ -0.81
RRF1YHR038W GRE2Q12068 342 aaKnown RBP9.97□□□□□ -0.81
RRF1YHR038W MIF2P35201 549 aa9.88□□□□□ -0.83
RRF1YHR038W MID1P41821 548 aa9.87□□□□□ -0.83
RRF1YHR038W DPS1P04802 557 aaKnown RBP9.86□□□□□ -0.83
RRF1YHR038W ATH1P48016 1211 aa9.85□□□□□ -0.83
RRF1YHR038W EDS1P38073 919 aa9.84□□□□□ -0.83
RRF1YHR038W ARH1P48360 493 aa9.84□□□□□ -0.83
RRF1YHR038W PTC3P34221 468 aaKnown RBP9.83□□□□□ -0.84
RRF1YHR038W GUT1P32190 709 aa9.82□□□□□ -0.84
RRF1YHR038W NST1P53935 1240 aa9.81□□□□□ -0.84
RRF1YHR038W MAK11P20484 414 aaKnown RBP9.78□□□□□ -0.84
RRF1YHR038W RAM2P29703 316 aa9.76□□□□□ -0.85
RRF1YHR038W SOL3P38858 249 aa9.75□□□□□ -0.85
RRF1YHR038W SPT23P35210 1082 aa9.72□□□□□ -0.85
RRF1YHR038W PEX29Q03370 554 aa9.72□□□□□ -0.85
RRF1YHR038W MPH3P0CE00 602 aa9.67□□□□□ -0.86
RRF1YHR038W COQ8P27697 501 aa9.67□□□□□ -0.86
RRF1YHR038W ILV3P39522 585 aaKnown RBP9.67□□□□□ -0.86
RRF1YHR038W AI4P03878 556 aa9.66□□□□□ -0.86
RRF1YHR038W HAP5Q02516 242 aa9.66□□□□□ -0.86
RRF1YHR038W SRC1Q03707 834 aa9.66□□□□□ -0.86
RRF1YHR038W BNI4P53858 892 aa9.59□□□□□ -0.87
RRF1YHR038W PTC2P39966 464 aaKnown RBP9.57□□□□□ -0.88
RRF1YHR038W YML082WQ04533 649 aaKnown RBP9.57□□□□□ -0.88
RRF1YHR038W MPC54Q08550 464 aa9.57□□□□□ -0.88
RRF1YHR038W RGA2Q06407 1009 aa9.54□□□□□ -0.88
RRF1YHR038W YGR273CP53329 174 aa9.51□□□□□ -0.89
RRF1YHR038W NMA111P53920 997 aa9.49□□□□□ -0.89
RRF1YHR038W RAS1P01119 309 aa9.45□□□□□ -0.9
RRF1YHR038W SLI15P38283 698 aa9.45□□□□□ -0.9
RRF1YHR038W RGA1P39083 1007 aa9.43□□□□□ -0.9
RRF1YHR038W YPR015CQ12531 247 aa9.42□□□□□ -0.9
RRF1YHR038W DPL1Q05567 589 aa9.4□□□□□ -0.9
RRF1YHR038W NOP53Q12080 455 aaKnown RBP9.37□□□□□ -0.91
RRF1YHR038W RAM1P22007 431 aa9.34□□□□□ -0.91
RRF1YHR038W KEX1P09620 729 aa9.28□□□□□ -0.92
RRF1YHR038W ISU2Q12056 156 aa9.28□□□□□ -0.92
RRF1YHR038W GYP1Q08484 637 aa9.27□□□□□ -0.93
RRF1YHR038W CDC73Q06697 393 aa9.26□□□□□ -0.93
RRF1YHR038W AMS1P22855 1083 aa9.24□□□□□ -0.93
RRF1YHR038W PDR1P12383 1068 aa9.22□□□□□ -0.93
RRF1YHR038W TRK1P12685 1235 aa9.22□□□□□ -0.93
RRF1YHR038W SDH2P21801 266 aa9.2□□□□□ -0.94
RRF1YHR038W YLR326WQ06170 240 aaKnown RBP9.14□□□□□ -0.95
RRF1YHR038W UBP14P38237 781 aaKnown RBP9.11□□□□□ -0.95
RRF1YHR038W SAS4Q04003 481 aa9.11□□□□□ -0.95
RRF1YHR038W VHR2P40041 505 aa9.1□□□□□ -0.95
RRF1YHR038W PCS60P38137 543 aaKnown RBP RIP-Chip data9.08□□□□□ -0.96not detected
RRF1YHR038W YEL077CQ3E7X8 1277 aa9.04□□□□□ -0.96
RRF1YHR038W RAD54P32863 898 aa9.02□□□□□ -0.97
RRF1YHR038W SET1P38827 1080 aaKnown RBP9.01□□□□□ -0.97
RRF1YHR038W BUD20Q08004 166 aaPredicted RBP8.99□□□□□ -0.97
RRF1YHR038W MRF1P30775 413 aaPredicted RBP8.97□□□□□ -0.97
RRF1YHR038W YPL062WQ02781 134 aa8.97□□□□□ -0.97
RRF1YHR038W RPP1BP10622 106 aaKnown RBP8.95□□□□□ -0.98
RRF1YHR038W YRR1Q12172 810 aa8.95□□□□□ -0.98
RRF1YHR038W PRT1P06103 763 aaKnown RBP8.94□□□□□ -0.98
RRF1YHR038W STR2P47164 639 aa8.92□□□□□ -0.98
RRF1YHR038W AIR1P40507 360 aaKnown RBP8.91□□□□□ -0.98
RRF1YHR038W ISM1P48526 1002 aa8.9□□□□□ -0.98
RRF1YHR038W YDR090CQ03193 310 aa8.89□□□□□ -0.99
RRF1YHR038W CLA4P48562 842 aa8.88□□□□□ -0.99
RRF1YHR038W CST6P40535 587 aa8.87□□□□□ -0.99
RRF1YHR038W BRE2P43132 505 aa8.87□□□□□ -0.99
RRF1YHR038W PEX21P50091 288 aa8.87□□□□□ -0.99
RRF1YHR038W ERG12P07277 443 aa8.86□□□□□ -0.99
RRF1YHR038W GAR1P28007 205 aaKnown RBP8.84□□□□□ -0.99
RRF1YHR038W NUD1P32336 851 aa8.84□□□□□ -0.99
RRF1YHR038W GAP1P19145 602 aaPredicted RBP8.83□□□□□ -1
RRF1YHR038W KIC1P38692 1080 aa8.83□□□□□ -1
RRF1YHR038W TUM1Q08686 304 aaKnown RBP8.82□□□□□ -1
RRF1YHR038W TFB4Q12004 338 aa8.79□□□□□ -1
RRF1YHR038W GCR2Q01722 534 aa8.78□□□□□ -1
RRF1YHR038W CSC1Q06538 782 aa8.78□□□□□ -1
RRF1YHR038W LAM6Q08001 693 aa8.77□□□□□ -1.01
RRF1YHR038W TY1A-DR4O74302 440 aa8.76□□□□□ -1.01
RRF1YHR038W TY1A-HP0C2I4 478 aaKnown RBP8.76□□□□□ -1.01
RRF1YHR038W TY1A-AP0CX57 440 aa8.76□□□□□ -1.01
RRF1YHR038W TY1A-PR1P0CX58 440 aa8.76□□□□□ -1.01
RRF1YHR038W TY1A-ORP0CX59 440 aa8.76□□□□□ -1.01
RRF1YHR038W TY1A-PR2P0CX60 440 aa8.76□□□□□ -1.01
RRF1YHR038W TY1A-DR5P0CX65 440 aa8.76□□□□□ -1.01
RRF1YHR038W TY1A-ER2P0CX66 440 aa8.76□□□□□ -1.01
RRF1YHR038W TY1A-GR3P0CX67 440 aa8.76□□□□□ -1.01
RRF1YHR038W TY1A-LR1P0CX68 440 aa8.76□□□□□ -1.01
RRF1YHR038W TY1A-MR2P0CX69 440 aa8.76□□□□□ -1.01
RRF1YHR038W SEC2P17065 759 aa8.76□□□□□ -1.01
RRF1YHR038W GBP2P25555 427 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
RRF1YHR038W TY1A-JR2P47099 440 aa8.76□□□□□ -1.01
RRF1YHR038W TY1A-DR1Q03856 440 aa8.76□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms