RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C VHR2P40041 505 aa6.36□□□□□ -1.39
MSM1YGR171C ABP1P15891 592 aaKnown RBP6.33□□□□□ -1.4
MSM1YGR171C UBP14P38237 781 aaKnown RBP6.33□□□□□ -1.4
MSM1YGR171C NUP42P49686 430 aaKnown RBP6.33□□□□□ -1.4
MSM1YGR171C YGR273CP53329 174 aa6.33□□□□□ -1.4
MSM1YGR171C YOL036WQ08206 761 aa6.33□□□□□ -1.4
MSM1YGR171C SET4P42948 560 aa6.32□□□□□ -1.4
MSM1YGR171C DIT2P21595 489 aa6.31□□□□□ -1.4
MSM1YGR171C GLC3P32775 704 aa6.31□□□□□ -1.4
MSM1YGR171C DCW1P36091 449 aa6.31□□□□□ -1.4
MSM1YGR171C YLR326WQ06170 240 aaKnown RBP6.31□□□□□ -1.4
MSM1YGR171C KIC1P38692 1080 aa6.3□□□□□ -1.4
MSM1YGR171C YDR090CQ03193 310 aa6.3□□□□□ -1.4
MSM1YGR171C AIM7Q12156 149 aa6.3□□□□□ -1.4
MSM1YGR171C MSB4Q12317 492 aa6.3□□□□□ -1.4
MSM1YGR171C HTA1P04911 132 aaKnown RBP6.29□□□□□ -1.4
MSM1YGR171C HTA2P04912 132 aa6.29□□□□□ -1.4
MSM1YGR171C KIN1P13185 1064 aa6.29□□□□□ -1.4
MSM1YGR171C DMA2P53924 522 aa6.29□□□□□ -1.4
MSM1YGR171C SOL3P38858 249 aa6.28□□□□□ -1.4
MSM1YGR171C KEX1P09620 729 aa6.28□□□□□ -1.4
MSM1YGR171C WSC3Q12215 556 aa6.28□□□□□ -1.4
MSM1YGR171C RAD54P32863 898 aa6.27□□□□□ -1.41
MSM1YGR171C ATF2P53296 535 aa6.26□□□□□ -1.41
MSM1YGR171C PCS60P38137 543 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
MSM1YGR171C EAP1P36041 632 aaKnown RBP6.23□□□□□ -1.41
MSM1YGR171C NST1P53935 1240 aa6.23□□□□□ -1.41
MSM1YGR171C AI4P03878 556 aa6.22□□□□□ -1.41
MSM1YGR171C YEL023CP39992 682 aa6.22□□□□□ -1.41
MSM1YGR171C YBL029C-AQ3E756 94 aa6.22□□□□□ -1.41
MSM1YGR171C MPH3P0CE00 602 aa6.21□□□□□ -1.42
MSM1YGR171C PSE1P32337 1089 aaKnown RBP6.2□□□□□ -1.42
MSM1YGR171C TRP5P00931 707 aaKnown RBP6.19□□□□□ -1.42
MSM1YGR171C VNX1P42839 908 aa6.19□□□□□ -1.42
MSM1YGR171C PTC4P38089 393 aa6.18□□□□□ -1.42
MSM1YGR171C UBP9P39967 754 aa6.18□□□□□ -1.42
MSM1YGR171C DAN4P47179 1161 aa6.18□□□□□ -1.42
MSM1YGR171C ILV3P39522 585 aaKnown RBP6.17□□□□□ -1.42
MSM1YGR171C HGH1P48362 394 aaKnown RBP6.17□□□□□ -1.42
MSM1YGR171C GUA1P38625 525 aaKnown RBP6.16□□□□□ -1.42
MSM1YGR171C ORC6P38826 435 aa6.16□□□□□ -1.42
MSM1YGR171C TIF11P38912 153 aaKnown RBP6.16□□□□□ -1.42
MSM1YGR171C ULI1P43604 169 aa6.16□□□□□ -1.42
MSM1YGR171C SPP1Q03012 353 aa6.15□□□□□ -1.42
MSM1YGR171C JIP4Q03361 876 aa6.15□□□□□ -1.42
MSM1YGR171C RPP1BP10622 106 aaKnown RBP6.14□□□□□ -1.43
MSM1YGR171C SLI15P38283 698 aa6.14□□□□□ -1.43
MSM1YGR171C TEA1P47988 759 aa6.13□□□□□ -1.43
MSM1YGR171C RGR1P19263 1082 aa6.11□□□□□ -1.43
MSM1YGR171C MVP1P40959 511 aaKnown RBP6.11□□□□□ -1.43
MSM1YGR171C HPC2Q01448 625 aa6.1□□□□□ -1.43
MSM1YGR171C CSC1Q06538 782 aa6.1□□□□□ -1.43
MSM1YGR171C IOC2Q12072 812 aa6.1□□□□□ -1.43
MSM1YGR171C CLB5P30283 435 aa6.09□□□□□ -1.43
MSM1YGR171C YNL035CP53962 389 aaKnown RBP6.09□□□□□ -1.43
MSM1YGR171C SSA2P10592 639 aaKnown RBP6.08□□□□□ -1.44
MSM1YGR171C GAP1P19145 602 aaPredicted RBP6.08□□□□□ -1.44
MSM1YGR171C CSN12P47130 423 aa6.08□□□□□ -1.44
MSM1YGR171C RLF2Q12495 606 aa6.08□□□□□ -1.44
MSM1YGR171C CDC73Q06697 393 aa6.08□□□□□ -1.44
MSM1YGR171C PML39Q03760 334 aa6.07□□□□□ -1.44
MSM1YGR171C LDB19Q12502 818 aa6.07□□□□□ -1.44
MSM1YGR171C BRL1P38770 471 aa6.06□□□□□ -1.44
MSM1YGR171C PEX21P50091 288 aa6.06□□□□□ -1.44
MSM1YGR171C TFB3Q03290 321 aa6.05□□□□□ -1.44
MSM1YGR171C TFB4Q12004 338 aa6.05□□□□□ -1.44
MSM1YGR171C RTG1P32607 177 aa6.05□□□□□ -1.44
MSM1YGR171C MID1P41821 548 aa6.05□□□□□ -1.44
MSM1YGR171C YPR109WQ06104 294 aa6.05□□□□□ -1.44
MSM1YGR171C SEC61P32915 480 aa6.04□□□□□ -1.44
MSM1YGR171C DPL1Q05567 589 aa6.03□□□□□ -1.44
MSM1YGR171C TFG1P41895 735 aaPredicted RBP6.02□□□□□ -1.45
MSM1YGR171C NIS1P53939 407 aa6.02□□□□□ -1.45
MSM1YGR171C PEX29Q03370 554 aa6.02□□□□□ -1.45
MSM1YGR171C YMR196WQ04336 1088 aa6.02□□□□□ -1.45
MSM1YGR171C TUM1Q08686 304 aaKnown RBP6.02□□□□□ -1.45
MSM1YGR171C MPC54Q08550 464 aa6.02□□□□□ -1.45
MSM1YGR171C FPK1P53739 893 aa6□□□□□ -1.45
MSM1YGR171C TYW1Q08960 810 aaKnown RBP6□□□□□ -1.45
MSM1YGR171C KTR1P27810 393 aaKnown RBP5.99□□□□□ -1.45
MSM1YGR171C GLN1P32288 370 aaKnown RBP5.99□□□□□ -1.45
MSM1YGR171C HST2P53686 357 aa5.99□□□□□ -1.45
MSM1YGR171C ISU2Q12056 156 aa5.99□□□□□ -1.45
MSM1YGR171C NCR1Q12200 1170 aa5.99□□□□□ -1.45
MSM1YGR171C PKC1P24583 1151 aa5.98□□□□□ -1.45
MSM1YGR171C NMA111P53920 997 aa5.97□□□□□ -1.45
MSM1YGR171C YDL129WQ07555 291 aa5.97□□□□□ -1.45
MSM1YGR171C YRR1Q12172 810 aa5.97□□□□□ -1.45
MSM1YGR171C MMP1Q12372 583 aa5.97□□□□□ -1.45
MSM1YGR171C SIT4P20604 311 aa5.95□□□□□ -1.46
MSM1YGR171C ESS1P22696 170 aa5.94□□□□□ -1.46
MSM1YGR171C SCJ1P25303 377 aa5.94□□□□□ -1.46
MSM1YGR171C PKH3Q03306 898 aaPredicted RBP5.94□□□□□ -1.46
MSM1YGR171C YJL007CP47080 104 aa5.94□□□□□ -1.46
MSM1YGR171C RAD59Q12223 238 aa5.92□□□□□ -1.46
MSM1YGR171C SLY41P22215 453 aa5.91□□□□□ -1.46
MSM1YGR171C YBL036CP38197 257 aa5.91□□□□□ -1.46
MSM1YGR171C SAP30P38429 201 aa5.91□□□□□ -1.46
MSM1YGR171C BIM1P40013 344 aa5.91□□□□□ -1.46
MSM1YGR171C FKH1P40466 484 aa5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 34.1 ms