RNA–Protein interactions for RNA: YGR087C

PDC6, Transcript of Minor isoform of pyruvate decarboxylase, yeastyeast

Gene PDC6, Length 1,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDC6YGR087C NUP159P40477 1460 aa12.07□□□□□ -0.48
PDC6YGR087C NTE1Q04958 1679 aa12.06□□□□□ -0.48
PDC6YGR087C RTT106P40161 455 aa12.06□□□□□ -0.48
PDC6YGR087C IFH1P39520 1085 aa12.05□□□□□ -0.48
PDC6YGR087C MLP2P40457 1679 aa12.05□□□□□ -0.48
PDC6YGR087C PDR15Q04182 1529 aaKnown RBP12.03□□□□□ -0.48
PDC6YGR087C SNT2P53127 1403 aa12.03□□□□□ -0.48
PDC6YGR087C RPO21P04050 1733 aaKnown RBP12.01□□□□□ -0.49
PDC6YGR087C ULS1Q08562 1619 aa11.97□□□□□ -0.49
PDC6YGR087C YRF1-1P0CX20 1796 aa11.96□□□□□ -0.5
PDC6YGR087C YRF1-5P0CX21 1796 aa11.96□□□□□ -0.5
PDC6YGR087C YRF1-8P0CX22 1796 aa11.96□□□□□ -0.5
PDC6YGR087C MET10P39692 1035 aa11.93□□□□□ -0.5
PDC6YGR087C GEA2P39993 1459 aaKnown RBP11.92□□□□□ -0.5
PDC6YGR087C VPS15P22219 1454 aa11.92□□□□□ -0.5
PDC6YGR087C LTE1P07866 1435 aa11.91□□□□□ -0.5
PDC6YGR087C GEA1P47102 1408 aaPredicted RBP11.9□□□□□ -0.5
PDC6YGR087C SPO14P36126 1683 aa11.82□□□□□ -0.52
PDC6YGR087C IRC20Q06554 1556 aa11.81□□□□□ -0.52
PDC6YGR087C NUP157P40064 1391 aaKnown RBP11.79□□□□□ -0.52
PDC6YGR087C PDR12Q02785 1511 aa11.79□□□□□ -0.52
PDC6YGR087C ITT1Q04638 464 aa11.78□□□□□ -0.52
PDC6YGR087C TY3B-GQ99315 1547 aa11.76□□□□□ -0.53
PDC6YGR087C GDB1Q06625 1536 aa11.75□□□□□ -0.53
PDC6YGR087C DRS2P39524 1355 aa11.75□□□□□ -0.53
PDC6YGR087C CAT8P39113 1433 aa11.73□□□□□ -0.53
PDC6YGR087C PDR10P51533 1564 aa11.73□□□□□ -0.53
PDC6YGR087C CKB1P43639 278 aa11.72□□□□□ -0.53
PDC6YGR087C NUP170P38181 1502 aa11.72□□□□□ -0.53
PDC6YGR087C YBT1P32386 1661 aa11.7□□□□□ -0.54
PDC6YGR087C IKI3Q06706 1349 aaKnown RBP11.69□□□□□ -0.54
PDC6YGR087C IQG1Q12280 1495 aa11.69□□□□□ -0.54
PDC6YGR087C BNI1P41832 1953 aa11.69□□□□□ -0.54
PDC6YGR087C BUD3P25558 1636 aa11.62□□□□□ -0.55
PDC6YGR087C ARO1P08566 1588 aaKnown RBP11.62□□□□□ -0.55
PDC6YGR087C MMS1Q06211 1407 aa11.61□□□□□ -0.55
PDC6YGR087C SRB8P25648 1427 aa11.57□□□□□ -0.56
PDC6YGR087C SSM4P40318 1319 aa11.57□□□□□ -0.56
PDC6YGR087C YSP2Q06681 1438 aa11.56□□□□□ -0.56
PDC6YGR087C TRM3Q07527 1436 aa11.54□□□□□ -0.56
PDC6YGR087C DOP1Q03921 1698 aa11.53□□□□□ -0.56
PDC6YGR087C BNR1P40450 1375 aa11.52□□□□□ -0.57
PDC6YGR087C BUD21Q08492 214 aaPredicted RBP11.51□□□□□ -0.57
PDC6YGR087C SEC7P11075 2009 aaKnown RBP11.46□□□□□ -0.57
PDC6YGR087C ABP1P15891 592 aaKnown RBP11.46□□□□□ -0.57
PDC6YGR087C CHC1P22137 1653 aaKnown RBP11.43□□□□□ -0.58
PDC6YGR087C DNF2Q12675 1612 aa11.4□□□□□ -0.58
PDC6YGR087C URN1Q06525 465 aaKnown RBP11.28□□□□□ -0.6
PDC6YGR087C YAP3P38749 330 aa11.27□□□□□ -0.6
PDC6YGR087C YOR093CQ12275 1648 aa11.26□□□□□ -0.61
PDC6YGR087C GCN2P15442 1659 aa11.25□□□□□ -0.61
PDC6YGR087C MIF2P35201 549 aa11.23□□□□□ -0.61
PDC6YGR087C IPL1P38991 367 aa11.2□□□□□ -0.62
PDC6YGR087C TYS1P36421 394 aaKnown RBP11.2□□□□□ -0.62
PDC6YGR087C PAF1P38351 445 aa11.2□□□□□ -0.62
PDC6YGR087C NUP188P52593 1655 aaKnown RBP11.19□□□□□ -0.62
PDC6YGR087C VMR1P38735 1592 aa11.19□□□□□ -0.62
PDC6YGR087C NOP7P53261 605 aaKnown RBP11.17□□□□□ -0.62
PDC6YGR087C PDR5P33302 1511 aaKnown RBP11.16□□□□□ -0.62
PDC6YGR087C IML1P47170 1584 aa11.16□□□□□ -0.62
PDC6YGR087C DNF3Q12674 1656 aa11.13□□□□□ -0.63
PDC6YGR087C BFR2Q06631 534 aaKnown RBP11.13□□□□□ -0.63
PDC6YGR087C PDR11P40550 1411 aa11.12□□□□□ -0.63
PDC6YGR087C MAK10Q02197 733 aa11.08□□□□□ -0.64
PDC6YGR087C RAV1P47104 1357 aa11.05□□□□□ -0.64
PDC6YGR087C RTC1Q08281 1341 aa11.02□□□□□ -0.65
PDC6YGR087C TAF5P38129 798 aa10.96□□□□□ -0.65
PDC6YGR087C HAP1P0CE41 1502 aa10.96□□□□□ -0.66
PDC6YGR087C MRX12P47084 519 aa10.94□□□□□ -0.66
PDC6YGR087C ORC1P54784 914 aaPredicted RBP10.93□□□□□ -0.66
PDC6YGR087C YFR006WP43590 535 aa10.92□□□□□ -0.66
PDC6YGR087C ESL2P36168 1195 aa10.92□□□□□ -0.66
PDC6YGR087C KRE5P22023 1365 aa10.91□□□□□ -0.66
PDC6YGR087C ALD4P46367 519 aaKnown RBP10.91□□□□□ -0.66
PDC6YGR087C CAB1Q04430 367 aa10.91□□□□□ -0.66
PDC6YGR087C RAD9P14737 1309 aa10.91□□□□□ -0.66
PDC6YGR087C RIA1P53893 1110 aa10.9□□□□□ -0.66
PDC6YGR087C NUP192P47054 1683 aa10.89□□□□□ -0.67
PDC6YGR087C USO1P25386 1790 aa10.88□□□□□ -0.67
PDC6YGR087C BCK1Q01389 1478 aa10.86□□□□□ -0.67
PDC6YGR087C TAF8Q03750 510 aa10.85□□□□□ -0.67
PDC6YGR087C POL5P39985 1022 aaKnown RBP10.84□□□□□ -0.67
PDC6YGR087C KIP3P53086 805 aaKnown RBP10.84□□□□□ -0.67
PDC6YGR087C YMR196WQ04336 1088 aa10.83□□□□□ -0.68
PDC6YGR087C NAP1P25293 417 aaKnown RBP10.82□□□□□ -0.68
PDC6YGR087C THI12P42883 340 aa10.82□□□□□ -0.68
PDC6YGR087C THI5P43534 340 aa10.82□□□□□ -0.68
PDC6YGR087C THI11P47183 340 aa10.82□□□□□ -0.68
PDC6YGR087C THI13Q07748 340 aa10.82□□□□□ -0.68
PDC6YGR087C TY1B-NL2Q99337 1749 aaKnown RBP10.81□□□□□ -0.68
PDC6YGR087C CFT1Q06632 1357 aaKnown RBP10.81□□□□□ -0.68
PDC6YGR087C SPE2P21182 396 aa10.78□□□□□ -0.68
PDC6YGR087C YNR029CP53729 429 aaKnown RBP10.78□□□□□ -0.68
PDC6YGR087C TY3B-IQ7LHG5 1498 aaKnown RBP10.75□□□□□ -0.69
PDC6YGR087C YLR419WQ06698 1435 aaKnown RBP10.71□□□□□ -0.69
PDC6YGR087C RCM1P53972 490 aa10.71□□□□□ -0.69
PDC6YGR087C CHZ1P40019 153 aaPredicted RBP10.69□□□□□ -0.7
PDC6YGR087C SCT1P32784 759 aa10.66□□□□□ -0.7
PDC6YGR087C PPH3P32345 308 aa10.66□□□□□ -0.7
PDC6YGR087C CPS1P27614 576 aa10.65□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms