RNA–Protein interactions for RNA: YGR056W

RSC1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene RSC1, Length 2,787 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSC1YGR056W SPP41P38904 1435 aa5.39□□□□□ -1.55
RSC1YGR056W NTE1Q04958 1679 aa5.38□□□□□ -1.55
RSC1YGR056W TY1B-JR2P47100 1755 aaKnown RBP5.38□□□□□ -1.55
RSC1YGR056W TY1B-ER2Q03619 1755 aa5.38□□□□□ -1.55
RSC1YGR056W TY1B-MR1Q04214 1755 aa5.38□□□□□ -1.55
RSC1YGR056W TY1B-MR2Q04670 1755 aaKnown RBP5.38□□□□□ -1.55
RSC1YGR056W TY1B-LR1Q12088 1755 aaKnown RBP5.38□□□□□ -1.55
RSC1YGR056W TY1B-NL1Q12112 1755 aa5.38□□□□□ -1.55
RSC1YGR056W TY1B-GR1Q12141 1755 aa5.38□□□□□ -1.55
RSC1YGR056W TY1B-BLQ12490 1755 aa5.38□□□□□ -1.55
RSC1YGR056W VTH1P40438 1549 aa5.37□□□□□ -1.55
RSC1YGR056W VTH2P40890 1549 aa5.37□□□□□ -1.55
RSC1YGR056W TRM732Q03496 1420 aa5.36□□□□□ -1.55
RSC1YGR056W MLP2P40457 1679 aa5.35□□□□□ -1.55
RSC1YGR056W TSC11P40061 1430 aa5.34□□□□□ -1.55
RSC1YGR056W RPO21P04050 1733 aaKnown RBP5.34□□□□□ -1.55
RSC1YGR056W MET5P47169 1442 aa5.33□□□□□ -1.56
RSC1YGR056W SNQ2P32568 1501 aaKnown RBP5.32□□□□□ -1.56
RSC1YGR056W SPT21P35209 758 aa5.3□□□□□ -1.56
RSC1YGR056W NUP159P40477 1460 aa5.3□□□□□ -1.56
RSC1YGR056W YRF1-1P0CX20 1796 aa5.29□□□□□ -1.56
RSC1YGR056W YRF1-5P0CX21 1796 aa5.29□□□□□ -1.56
RSC1YGR056W YRF1-8P0CX22 1796 aa5.29□□□□□ -1.56
RSC1YGR056W RIM101P33400 625 aa5.29□□□□□ -1.56
RSC1YGR056W ULS1Q08562 1619 aa5.29□□□□□ -1.56
RSC1YGR056W PDR15Q04182 1529 aaKnown RBP5.29□□□□□ -1.56
RSC1YGR056W SAS10Q12136 610 aaPredicted RBP5.28□□□□□ -1.56
RSC1YGR056W REB1P21538 810 aa5.28□□□□□ -1.56
RSC1YGR056W STH1P32597 1359 aa5.28□□□□□ -1.56
RSC1YGR056W LEO1P38439 464 aa5.26□□□□□ -1.57
RSC1YGR056W VPS15P22219 1454 aa5.25□□□□□ -1.57
RSC1YGR056W SSP1P38871 571 aa5.25□□□□□ -1.57
RSC1YGR056W SNT2P53127 1403 aa5.25□□□□□ -1.57
RSC1YGR056W LTE1P07866 1435 aa5.25□□□□□ -1.57
RSC1YGR056W GEA2P39993 1459 aaKnown RBP5.24□□□□□ -1.57
RSC1YGR056W MRPL32P25348 183 aa5.24□□□□□ -1.57
RSC1YGR056W SPO14P36126 1683 aa5.22□□□□□ -1.57
RSC1YGR056W RTT106P40161 455 aa5.21□□□□□ -1.57
RSC1YGR056W IRC20Q06554 1556 aa5.21□□□□□ -1.58
RSC1YGR056W PDR12Q02785 1511 aa5.19□□□□□ -1.58
RSC1YGR056W YBT1P32386 1661 aa5.19□□□□□ -1.58
RSC1YGR056W GDB1Q06625 1536 aa5.19□□□□□ -1.58
RSC1YGR056W OXP1P28273 1286 aa5.19□□□□□ -1.58
RSC1YGR056W IFH1P39520 1085 aa5.18□□□□□ -1.58
RSC1YGR056W NUP170P38181 1502 aa5.18□□□□□ -1.58
RSC1YGR056W GEA1P47102 1408 aaPredicted RBP5.18□□□□□ -1.58
RSC1YGR056W MET10P39692 1035 aa5.16□□□□□ -1.58
RSC1YGR056W BNI1P41832 1953 aa5.16□□□□□ -1.58
RSC1YGR056W DRS2P39524 1355 aa5.16□□□□□ -1.58
RSC1YGR056W TY3B-GQ99315 1547 aa5.16□□□□□ -1.58
RSC1YGR056W YAH1Q12184 172 aaKnown RBP5.15□□□□□ -1.59
RSC1YGR056W PDR10P51533 1564 aa5.14□□□□□ -1.59
RSC1YGR056W DOP1Q03921 1698 aa5.14□□□□□ -1.59
RSC1YGR056W NUP157P40064 1391 aaKnown RBP5.14□□□□□ -1.59
RSC1YGR056W CAT8P39113 1433 aa5.13□□□□□ -1.59
RSC1YGR056W IQG1Q12280 1495 aa5.13□□□□□ -1.59
RSC1YGR056W BUD3P25558 1636 aa5.13□□□□□ -1.59
RSC1YGR056W YLR271WQ06152 274 aa5.12□□□□□ -1.59
RSC1YGR056W ARO1P08566 1588 aaKnown RBP5.12□□□□□ -1.59
RSC1YGR056W CHC1P22137 1653 aaKnown RBP5.11□□□□□ -1.59
RSC1YGR056W ITT1Q04638 464 aa5.1□□□□□ -1.59
RSC1YGR056W TRM3Q07527 1436 aa5.1□□□□□ -1.59
RSC1YGR056W LEU3P08638 886 aa5.1□□□□□ -1.59
RSC1YGR056W MMS1Q06211 1407 aa5.09□□□□□ -1.59
RSC1YGR056W DNF2Q12675 1612 aa5.08□□□□□ -1.6
RSC1YGR056W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
RSC1YGR056W CKB1P43639 278 aa5.05□□□□□ -1.6
RSC1YGR056W IKI3Q06706 1349 aaKnown RBP5.05□□□□□ -1.6
RSC1YGR056W SRB8P25648 1427 aa5.04□□□□□ -1.6
RSC1YGR056W SEC7P11075 2009 aaKnown RBP5.03□□□□□ -1.6
RSC1YGR056W YGL015CP33199 130 aa5.03□□□□□ -1.6
RSC1YGR056W YKR023WP36119 530 aaKnown RBP5.03□□□□□ -1.6
RSC1YGR056W CDC27P38042 758 aa5.03□□□□□ -1.6
RSC1YGR056W YSP2Q06681 1438 aa5.02□□□□□ -1.61
RSC1YGR056W YIL055CP40523 627 aaKnown RBP5.02□□□□□ -1.61
RSC1YGR056W CST9Q06032 482 aa5.01□□□□□ -1.61
RSC1YGR056W BNR1P40450 1375 aa5.01□□□□□ -1.61
RSC1YGR056W MGA2P40578 1113 aa5.01□□□□□ -1.61
RSC1YGR056W YOR093CQ12275 1648 aa5□□□□□ -1.61
RSC1YGR056W ABP1P15891 592 aaKnown RBP4.99□□□□□ -1.61
RSC1YGR056W SSM4P40318 1319 aa4.98□□□□□ -1.61
RSC1YGR056W MIF2P35201 549 aa4.98□□□□□ -1.61
RSC1YGR056W GCN2P15442 1659 aa4.97□□□□□ -1.61
RSC1YGR056W RSM7P47150 247 aa4.96□□□□□ -1.62
RSC1YGR056W BUD21Q08492 214 aaPredicted RBP4.96□□□□□ -1.62
RSC1YGR056W DMA2P53924 522 aa4.95□□□□□ -1.62
RSC1YGR056W NUP188P52593 1655 aaKnown RBP4.95□□□□□ -1.62
RSC1YGR056W DNF3Q12674 1656 aa4.95□□□□□ -1.62
RSC1YGR056W VMR1P38735 1592 aa4.93□□□□□ -1.62
RSC1YGR056W HOP09932 586 aa4.93□□□□□ -1.62
RSC1YGR056W PSD2P53037 1138 aaKnown RBP4.92□□□□□ -1.62
RSC1YGR056W DCD1P06773 312 aa4.92□□□□□ -1.62
RSC1YGR056W TFC8Q12308 588 aa4.92□□□□□ -1.62
RSC1YGR056W PDR5P33302 1511 aaKnown RBP4.91□□□□□ -1.62
RSC1YGR056W IML1P47170 1584 aa4.91□□□□□ -1.62
RSC1YGR056W RPN1P38764 993 aaKnown RBP4.89□□□□□ -1.63
RSC1YGR056W URN1Q06525 465 aaKnown RBP4.89□□□□□ -1.63
RSC1YGR056W YAP3P38749 330 aa4.88□□□□□ -1.63
RSC1YGR056W UBP10P53874 792 aaPredicted RBP4.88□□□□□ -1.63
RSC1YGR056W AI2P03876 854 aa4.87□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms