RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W SAS10Q12136 610 aaPredicted RBP8.47□□□□□ -1.05
SHE10YGL228W YRF1-1P0CX20 1796 aa8.47□□□□□ -1.05
SHE10YGL228W YRF1-5P0CX21 1796 aa8.47□□□□□ -1.05
SHE10YGL228W YRF1-8P0CX22 1796 aa8.47□□□□□ -1.05
SHE10YGL228W PDR15Q04182 1529 aaKnown RBP8.47□□□□□ -1.05
SHE10YGL228W STH1P32597 1359 aa8.44□□□□□ -1.06
SHE10YGL228W SNT2P53127 1403 aa8.41□□□□□ -1.06
SHE10YGL228W MET5P47169 1442 aa8.4□□□□□ -1.06
SHE10YGL228W NUP159P40477 1460 aa8.4□□□□□ -1.07
SHE10YGL228W IRC20Q06554 1556 aa8.35□□□□□ -1.07
SHE10YGL228W YBT1P32386 1661 aa8.34□□□□□ -1.07
SHE10YGL228W SPO14P36126 1683 aa8.34□□□□□ -1.07
SHE10YGL228W TY3B-GQ99315 1547 aa8.32□□□□□ -1.08
SHE10YGL228W GEA2P39993 1459 aaKnown RBP8.32□□□□□ -1.08
SHE10YGL228W GEA1P47102 1408 aaPredicted RBP8.31□□□□□ -1.08
SHE10YGL228W TAF7Q05021 590 aa8.31□□□□□ -1.08
SHE10YGL228W IFH1P39520 1085 aa8.3□□□□□ -1.08
SHE10YGL228W VPS15P22219 1454 aa8.29□□□□□ -1.08
SHE10YGL228W PDR12Q02785 1511 aa8.26□□□□□ -1.09
SHE10YGL228W GDB1Q06625 1536 aa8.26□□□□□ -1.09
SHE10YGL228W RTT106P40161 455 aa8.25□□□□□ -1.09
SHE10YGL228W LTE1P07866 1435 aa8.22□□□□□ -1.09
SHE10YGL228W PDR10P51533 1564 aa8.22□□□□□ -1.09
SHE10YGL228W BNI1P41832 1953 aa8.2□□□□□ -1.1
SHE10YGL228W NUP170P38181 1502 aa8.2□□□□□ -1.1
SHE10YGL228W ARO1P08566 1588 aaKnown RBP8.19□□□□□ -1.1
SHE10YGL228W MET10P39692 1035 aa8.19□□□□□ -1.1
SHE10YGL228W BUD3P25558 1636 aa8.18□□□□□ -1.1
SHE10YGL228W NUP157P40064 1391 aaKnown RBP8.18□□□□□ -1.1
SHE10YGL228W CAT8P39113 1433 aa8.17□□□□□ -1.1
SHE10YGL228W DOP1Q03921 1698 aa8.14□□□□□ -1.11
SHE10YGL228W IKI3Q06706 1349 aaKnown RBP8.14□□□□□ -1.11
SHE10YGL228W IQG1Q12280 1495 aa8.12□□□□□ -1.11
SHE10YGL228W SEC7P11075 2009 aaKnown RBP8.1□□□□□ -1.11
SHE10YGL228W CHC1P22137 1653 aaKnown RBP8.1□□□□□ -1.11
SHE10YGL228W SSM4P40318 1319 aa8.09□□□□□ -1.11
SHE10YGL228W DRS2P39524 1355 aa8.08□□□□□ -1.12
SHE10YGL228W ITT1Q04638 464 aa8.06□□□□□ -1.12
SHE10YGL228W CKB1P43639 278 aa8.05□□□□□ -1.12
SHE10YGL228W YSP2Q06681 1438 aa8.05□□□□□ -1.12
SHE10YGL228W SRB8P25648 1427 aa8.04□□□□□ -1.12
SHE10YGL228W TRM3Q07527 1436 aa8.02□□□□□ -1.13
SHE10YGL228W DNF2Q12675 1612 aa8.01□□□□□ -1.13
SHE10YGL228W MMS1Q06211 1407 aa8□□□□□ -1.13
SHE10YGL228W FAP1P53971 965 aa7.98□□□□□ -1.13
SHE10YGL228W GCN2P15442 1659 aa7.97□□□□□ -1.13
SHE10YGL228W BNR1P40450 1375 aa7.96□□□□□ -1.14
SHE10YGL228W YOR093CQ12275 1648 aa7.93□□□□□ -1.14
SHE10YGL228W VMR1P38735 1592 aa7.91□□□□□ -1.14
SHE10YGL228W BUD21Q08492 214 aaPredicted RBP7.9□□□□□ -1.14
SHE10YGL228W NUP188P52593 1655 aaKnown RBP7.9□□□□□ -1.14
SHE10YGL228W PDR5P33302 1511 aaKnown RBP7.86□□□□□ -1.15
SHE10YGL228W DNF3Q12674 1656 aa7.83□□□□□ -1.16
SHE10YGL228W IML1P47170 1584 aa7.82□□□□□ -1.16
SHE10YGL228W PDR11P40550 1411 aa7.79□□□□□ -1.16
SHE10YGL228W ABP1P15891 592 aaKnown RBP7.76□□□□□ -1.17
SHE10YGL228W NUP192P47054 1683 aa7.73□□□□□ -1.17
SHE10YGL228W TYS1P36421 394 aaKnown RBP7.72□□□□□ -1.17
SHE10YGL228W USO1P25386 1790 aa7.72□□□□□ -1.17
SHE10YGL228W YAP3P38749 330 aa7.72□□□□□ -1.17
SHE10YGL228W IPL1P38991 367 aa7.7□□□□□ -1.18
SHE10YGL228W RAV1P47104 1357 aa7.69□□□□□ -1.18
SHE10YGL228W NOP7P53261 605 aaKnown RBP7.68□□□□□ -1.18
SHE10YGL228W URN1Q06525 465 aaKnown RBP7.68□□□□□ -1.18
SHE10YGL228W PAF1P38351 445 aa7.67□□□□□ -1.18
SHE10YGL228W HAP1P0CE41 1502 aa7.67□□□□□ -1.18
SHE10YGL228W BFR2Q06631 534 aaKnown RBP7.66□□□□□ -1.18
SHE10YGL228W RTC1Q08281 1341 aa7.64□□□□□ -1.19
SHE10YGL228W MAK10Q02197 733 aa7.59□□□□□ -1.19
SHE10YGL228W BCK1Q01389 1478 aa7.58□□□□□ -1.2
SHE10YGL228W MIF2P35201 549 aa7.58□□□□□ -1.2
SHE10YGL228W TY1B-NL2Q99337 1749 aaKnown RBP7.57□□□□□ -1.2
SHE10YGL228W TY3B-IQ7LHG5 1498 aaKnown RBP7.56□□□□□ -1.2
SHE10YGL228W TAF5P38129 798 aa7.56□□□□□ -1.2
SHE10YGL228W RAD9P14737 1309 aa7.56□□□□□ -1.2
SHE10YGL228W PRY3P47033 881 aa7.55□□□□□ -1.2
SHE10YGL228W KRE5P22023 1365 aa7.54□□□□□ -1.2
SHE10YGL228W ORC1P54784 914 aaPredicted RBP7.52□□□□□ -1.2
SHE10YGL228W CAB1Q04430 367 aa7.52□□□□□ -1.21
SHE10YGL228W ESL2P36168 1195 aa7.51□□□□□ -1.21
SHE10YGL228W ALD4P46367 519 aaKnown RBP7.51□□□□□ -1.21
SHE10YGL228W POL5P39985 1022 aaKnown RBP7.5□□□□□ -1.21
SHE10YGL228W MLP1Q02455 1875 aaKnown RBP7.5□□□□□ -1.21
SHE10YGL228W CFT1Q06632 1357 aaKnown RBP7.5□□□□□ -1.21
SHE10YGL228W YLR419WQ06698 1435 aaKnown RBP7.49□□□□□ -1.21
SHE10YGL228W RIA1P53893 1110 aa7.48□□□□□ -1.21
SHE10YGL228W MRX12P47084 519 aa7.47□□□□□ -1.21
SHE10YGL228W KIP3P53086 805 aaKnown RBP7.47□□□□□ -1.21
SHE10YGL228W TAF8Q03750 510 aa7.47□□□□□ -1.21
SHE10YGL228W TY4B-HP0C2J7 1802 aa7.44□□□□□ -1.22
SHE10YGL228W TY4B-JP47024 1803 aa7.44□□□□□ -1.22
SHE10YGL228W SPE2P21182 396 aa7.44□□□□□ -1.22
SHE10YGL228W YNR029CP53729 429 aaKnown RBP7.42□□□□□ -1.22
SHE10YGL228W MHP1P43638 1398 aa7.41□□□□□ -1.22
SHE10YGL228W THI12P42883 340 aa7.41□□□□□ -1.22
SHE10YGL228W THI5P43534 340 aa7.41□□□□□ -1.22
SHE10YGL228W THI11P47183 340 aa7.41□□□□□ -1.22
SHE10YGL228W THI13Q07748 340 aa7.41□□□□□ -1.22
SHE10YGL228W YFR006WP43590 535 aa7.38□□□□□ -1.23
SHE10YGL228W YMR196WQ04336 1088 aa7.38□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms