RNA–Protein interactions for RNA: YGL227W

VID30, Transcript of Central component of GID Complex, involved in FBPase degradation, yeastyeast

Gene VID30, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VID30YGL227W YRF1-1P0CX20 1796 aa9.11□□□□□ -0.95
VID30YGL227W YRF1-5P0CX21 1796 aa9.11□□□□□ -0.95
VID30YGL227W YRF1-8P0CX22 1796 aa9.11□□□□□ -0.95
VID30YGL227W MLP2P40457 1679 aa9.11□□□□□ -0.95
VID30YGL227W SPO14P36126 1683 aa9.09□□□□□ -0.95
VID30YGL227W TRM732Q03496 1420 aa9.09□□□□□ -0.95
VID30YGL227W DOP1Q03921 1698 aa9.07□□□□□ -0.96
VID30YGL227W VPS15P22219 1454 aa9.06□□□□□ -0.96
VID30YGL227W DNF2Q12675 1612 aa9.06□□□□□ -0.96
VID30YGL227W VTH1P40438 1549 aa9.05□□□□□ -0.96
VID30YGL227W VTH2P40890 1549 aa9.05□□□□□ -0.96
VID30YGL227W NUP159P40477 1460 aa9.04□□□□□ -0.96
VID30YGL227W SPP41P38904 1435 aa9.03□□□□□ -0.96
VID30YGL227W DRS1P32892 752 aaKnown RBP9.02□□□□□ -0.97
VID30YGL227W SNQ2P32568 1501 aaKnown RBP9□□□□□ -0.97
VID30YGL227W YOR093CQ12275 1648 aa9□□□□□ -0.97
VID30YGL227W TSC11P40061 1430 aa9□□□□□ -0.97
VID30YGL227W NUP170P38181 1502 aa9□□□□□ -0.97
VID30YGL227W DRS2P39524 1355 aa8.98□□□□□ -0.97
VID30YGL227W YTA7P40340 1379 aa8.95□□□□□ -0.98
VID30YGL227W GDB1Q06625 1536 aa8.92□□□□□ -0.98
VID30YGL227W MMS1Q06211 1407 aa8.9□□□□□ -0.98
VID30YGL227W STH1P32597 1359 aa8.89□□□□□ -0.99
VID30YGL227W CHC1P22137 1653 aaKnown RBP8.89□□□□□ -0.99
VID30YGL227W ULS1Q08562 1619 aa8.87□□□□□ -0.99
VID30YGL227W IQG1Q12280 1495 aa8.8□□□□□ -1
VID30YGL227W CAT8P39113 1433 aa8.77□□□□□ -1.01
VID30YGL227W TY3B-GQ99315 1547 aa8.75□□□□□ -1.01
VID30YGL227W PDR10P51533 1564 aa8.73□□□□□ -1.01
VID30YGL227W TY1B-NL2Q99337 1749 aaKnown RBP8.72□□□□□ -1.01
VID30YGL227W DNF3Q12674 1656 aa8.71□□□□□ -1.02
VID30YGL227W PDR15Q04182 1529 aaKnown RBP8.68□□□□□ -1.02
VID30YGL227W ARO1P08566 1588 aaKnown RBP8.66□□□□□ -1.02
VID30YGL227W ITT1Q04638 464 aa8.65□□□□□ -1.03
VID30YGL227W MET10P39692 1035 aa8.63□□□□□ -1.03
VID30YGL227W TAF7Q05021 590 aa8.59□□□□□ -1.03
VID30YGL227W SEC7P11075 2009 aaKnown RBP8.57□□□□□ -1.04
VID30YGL227W YBT1P32386 1661 aa8.53□□□□□ -1.04
VID30YGL227W VMR1P38735 1592 aa8.52□□□□□ -1.05
VID30YGL227W YFR006WP43590 535 aa8.49□□□□□ -1.05
VID30YGL227W ABP1P15891 592 aaKnown RBP8.45□□□□□ -1.06
VID30YGL227W URN1Q06525 465 aaKnown RBP8.45□□□□□ -1.06
VID30YGL227W NUP157P40064 1391 aaKnown RBP8.43□□□□□ -1.06
VID30YGL227W PDR5P33302 1511 aaKnown RBP8.42□□□□□ -1.06
VID30YGL227W NUP188P52593 1655 aaKnown RBP8.41□□□□□ -1.06
VID30YGL227W EDE1P34216 1381 aa8.36□□□□□ -1.07
VID30YGL227W GEA1P47102 1408 aaPredicted RBP8.34□□□□□ -1.07
VID30YGL227W YSP2Q06681 1438 aa8.32□□□□□ -1.08
VID30YGL227W CFT1Q06632 1357 aaKnown RBP8.31□□□□□ -1.08
VID30YGL227W BNR1P40450 1375 aa8.31□□□□□ -1.08
VID30YGL227W IML1P47170 1584 aa8.28□□□□□ -1.08
VID30YGL227W RQC2Q12532 1038 aaKnown RBP8.28□□□□□ -1.08
VID30YGL227W YMR196WQ04336 1088 aa8.28□□□□□ -1.08
VID30YGL227W SRB8P25648 1427 aa8.27□□□□□ -1.09
VID30YGL227W RTT106P40161 455 aa8.26□□□□□ -1.09
VID30YGL227W TFA1P36100 482 aa8.26□□□□□ -1.09
VID30YGL227W YAP3P38749 330 aa8.22□□□□□ -1.09
VID30YGL227W GCN2P15442 1659 aa8.18□□□□□ -1.1
VID30YGL227W USO1P25386 1790 aa8.15□□□□□ -1.11
VID30YGL227W MAK10Q02197 733 aa8.14□□□□□ -1.11
VID30YGL227W YRF1-2P40105 1681 aa8.1□□□□□ -1.11
VID30YGL227W NUP192P47054 1683 aa8.1□□□□□ -1.11
VID30YGL227W BCK1Q01389 1478 aa8.08□□□□□ -1.12
VID30YGL227W YAH1Q12184 172 aaKnown RBP8.07□□□□□ -1.12
VID30YGL227W IPL1P38991 367 aa7.93□□□□□ -1.14
VID30YGL227W RRP5Q05022 1729 aaKnown RBP7.87□□□□□ -1.15
VID30YGL227W GTT3P39996 337 aa7.85□□□□□ -1.15
VID30YGL227W PTP3P40048 928 aa7.84□□□□□ -1.15
VID30YGL227W SCT1P32784 759 aa7.83□□□□□ -1.16
VID30YGL227W RAV1P47104 1357 aa7.82□□□□□ -1.16
VID30YGL227W BFR2Q06631 534 aaKnown RBP7.81□□□□□ -1.16
VID30YGL227W IKI3Q06706 1349 aaKnown RBP7.79□□□□□ -1.16
VID30YGL227W TY3B-IQ7LHG5 1498 aaKnown RBP7.79□□□□□ -1.16
VID30YGL227W PDR11P40550 1411 aa7.75□□□□□ -1.17
VID30YGL227W YLL066CQ99208 1374 aa7.75□□□□□ -1.17
VID30YGL227W YMR074CQ04773 145 aa7.72□□□□□ -1.17
VID30YGL227W BUD21Q08492 214 aaPredicted RBP7.72□□□□□ -1.17
VID30YGL227W THI12P42883 340 aa7.69□□□□□ -1.18
VID30YGL227W THI5P43534 340 aa7.69□□□□□ -1.18
VID30YGL227W THI11P47183 340 aa7.69□□□□□ -1.18
VID30YGL227W THI13Q07748 340 aa7.69□□□□□ -1.18
VID30YGL227W RTC1Q08281 1341 aa7.69□□□□□ -1.18
VID30YGL227W GLN1P32288 370 aaKnown RBP7.69□□□□□ -1.18
VID30YGL227W PRI1P10363 409 aa7.65□□□□□ -1.18
VID30YGL227W YIL055CP40523 627 aaKnown RBP7.64□□□□□ -1.19
VID30YGL227W ROM2P51862 1356 aaKnown RBP7.64□□□□□ -1.19
VID30YGL227W YLR419WQ06698 1435 aaKnown RBP7.63□□□□□ -1.19
VID30YGL227W URB1P34241 1764 aaKnown RBP7.63□□□□□ -1.19
VID30YGL227W YEF3P16521 1044 aaKnown RBP7.63□□□□□ -1.19
VID30YGL227W SNF2P22082 1703 aa7.62□□□□□ -1.19
VID30YGL227W CKB1P43639 278 aa7.61□□□□□ -1.19
VID30YGL227W NAP1P25293 417 aaKnown RBP7.61□□□□□ -1.19
VID30YGL227W YNR029CP53729 429 aaKnown RBP7.61□□□□□ -1.19
VID30YGL227W PSK1P31374 1356 aa7.58□□□□□ -1.2
VID30YGL227W SPT7P35177 1332 aa7.57□□□□□ -1.2
VID30YGL227W IFH1P39520 1085 aa7.57□□□□□ -1.2
VID30YGL227W FKS3Q04952 1785 aa7.56□□□□□ -1.2
VID30YGL227W ADE6P38972 1358 aaKnown RBP7.56□□□□□ -1.2
VID30YGL227W RPS9BP05755 195 aaKnown RBP7.56□□□□□ -1.2
VID30YGL227W TY4B-HP0C2J7 1802 aa7.56□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms