RNA–Protein interactions for RNA: YGL225W

VRG4, Transcript of Golgi GDP-mannose transporter, yeastyeast

Gene VRG4, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VRG4YGL225W RPO21P04050 1733 aaKnown RBP14.43□□□□□ -0.1
VRG4YGL225W YRF1-1P0CX20 1796 aa14.42□□□□□ -0.1
VRG4YGL225W YRF1-5P0CX21 1796 aa14.42□□□□□ -0.1
VRG4YGL225W YRF1-8P0CX22 1796 aa14.42□□□□□ -0.1
VRG4YGL225W SNQ2P32568 1501 aaKnown RBP14.42□□□□□ -0.1
VRG4YGL225W SNT2P53127 1403 aa14.41□□□□□ -0.1
VRG4YGL225W GEA2P39993 1459 aaKnown RBP14.37□□□□□ -0.11
VRG4YGL225W VPS15P22219 1454 aa14.36□□□□□ -0.11
VRG4YGL225W SAS10Q12136 610 aaPredicted RBP14.29□□□□□ -0.12
VRG4YGL225W BNI1P41832 1953 aa14.28□□□□□ -0.12
VRG4YGL225W TAF7Q05021 590 aa14.28□□□□□ -0.12
VRG4YGL225W MET10P39692 1035 aa14.27□□□□□ -0.13
VRG4YGL225W RTT106P40161 455 aa14.25□□□□□ -0.13
VRG4YGL225W MLP2P40457 1679 aa14.25□□□□□ -0.13
VRG4YGL225W ULS1Q08562 1619 aa14.24□□□□□ -0.13
VRG4YGL225W ITT1Q04638 464 aa14.23□□□□□ -0.13
VRG4YGL225W PDR15Q04182 1529 aaKnown RBP14.22□□□□□ -0.13
VRG4YGL225W PDR12Q02785 1511 aa14.2□□□□□ -0.14
VRG4YGL225W DRS2P39524 1355 aa14.2□□□□□ -0.14
VRG4YGL225W SPO14P36126 1683 aa14.15□□□□□ -0.14
VRG4YGL225W IRC20Q06554 1556 aa14.13□□□□□ -0.15
VRG4YGL225W NUP170P38181 1502 aa14.1□□□□□ -0.15
VRG4YGL225W GDB1Q06625 1536 aa14.09□□□□□ -0.15
VRG4YGL225W MMS1Q06211 1407 aa14.07□□□□□ -0.16
VRG4YGL225W IFH1P39520 1085 aa14.06□□□□□ -0.16
VRG4YGL225W NUP157P40064 1391 aaKnown RBP14.06□□□□□ -0.16
VRG4YGL225W GEA1P47102 1408 aaPredicted RBP14.05□□□□□ -0.16
VRG4YGL225W IQG1Q12280 1495 aa14.02□□□□□ -0.16
VRG4YGL225W PDR10P51533 1564 aa14□□□□□ -0.17
VRG4YGL225W CAT8P39113 1433 aa13.99□□□□□ -0.17
VRG4YGL225W BUD3P25558 1636 aa13.97□□□□□ -0.17
VRG4YGL225W TRM3Q07527 1436 aa13.95□□□□□ -0.18
VRG4YGL225W TY3B-GQ99315 1547 aa13.95□□□□□ -0.18
VRG4YGL225W DOP1Q03921 1698 aa13.9□□□□□ -0.18
VRG4YGL225W YBT1P32386 1661 aa13.88□□□□□ -0.19
VRG4YGL225W ABP1P15891 592 aaKnown RBP13.87□□□□□ -0.19
VRG4YGL225W DNF2Q12675 1612 aa13.85□□□□□ -0.19
VRG4YGL225W MIF2P35201 549 aa13.84□□□□□ -0.19
VRG4YGL225W ARO1P08566 1588 aaKnown RBP13.81□□□□□ -0.2
VRG4YGL225W SEC7P11075 2009 aaKnown RBP13.79□□□□□ -0.2
VRG4YGL225W YSP2Q06681 1438 aa13.79□□□□□ -0.2
VRG4YGL225W CKB1P43639 278 aa13.76□□□□□ -0.21
VRG4YGL225W CHC1P22137 1653 aaKnown RBP13.73□□□□□ -0.21
VRG4YGL225W BNR1P40450 1375 aa13.7□□□□□ -0.22
VRG4YGL225W SRB8P25648 1427 aa13.69□□□□□ -0.22
VRG4YGL225W IKI3Q06706 1349 aaKnown RBP13.65□□□□□ -0.22
VRG4YGL225W YOR093CQ12275 1648 aa13.58□□□□□ -0.24
VRG4YGL225W BUD21Q08492 214 aaPredicted RBP13.53□□□□□ -0.24
VRG4YGL225W YAP3P38749 330 aa13.52□□□□□ -0.25
VRG4YGL225W URN1Q06525 465 aaKnown RBP13.49□□□□□ -0.25
VRG4YGL225W SSM4P40318 1319 aa13.46□□□□□ -0.25
VRG4YGL225W DNF3Q12674 1656 aa13.44□□□□□ -0.26
VRG4YGL225W YFR006WP43590 535 aa13.4□□□□□ -0.26
VRG4YGL225W NUP188P52593 1655 aaKnown RBP13.37□□□□□ -0.27
VRG4YGL225W IPL1P38991 367 aa13.36□□□□□ -0.27
VRG4YGL225W HAP1P0CE41 1502 aa13.33□□□□□ -0.28
VRG4YGL225W MAK10Q02197 733 aa13.31□□□□□ -0.28
VRG4YGL225W VMR1P38735 1592 aa13.3□□□□□ -0.28
VRG4YGL225W GCN2P15442 1659 aa13.28□□□□□ -0.28
VRG4YGL225W TYS1P36421 394 aaKnown RBP13.26□□□□□ -0.29
VRG4YGL225W IML1P47170 1584 aa13.24□□□□□ -0.29
VRG4YGL225W PDR5P33302 1511 aaKnown RBP13.24□□□□□ -0.29
VRG4YGL225W PDR11P40550 1411 aa13.16□□□□□ -0.3
VRG4YGL225W PAF1P38351 445 aa13.08□□□□□ -0.32
VRG4YGL225W TY1B-NL2Q99337 1749 aaKnown RBP13.08□□□□□ -0.32
VRG4YGL225W RAV1P47104 1357 aa13.07□□□□□ -0.32
VRG4YGL225W USO1P25386 1790 aa13.07□□□□□ -0.32
VRG4YGL225W YMR196WQ04336 1088 aa13.06□□□□□ -0.32
VRG4YGL225W BFR2Q06631 534 aaKnown RBP13.02□□□□□ -0.33
VRG4YGL225W RTC1Q08281 1341 aa13□□□□□ -0.33
VRG4YGL225W NOP7P53261 605 aaKnown RBP12.98□□□□□ -0.33
VRG4YGL225W THI12P42883 340 aa12.95□□□□□ -0.34
VRG4YGL225W THI5P43534 340 aa12.95□□□□□ -0.34
VRG4YGL225W THI11P47183 340 aa12.95□□□□□ -0.34
VRG4YGL225W THI13Q07748 340 aa12.95□□□□□ -0.34
VRG4YGL225W BCK1Q01389 1478 aa12.94□□□□□ -0.34
VRG4YGL225W CFT1Q06632 1357 aaKnown RBP12.94□□□□□ -0.34
VRG4YGL225W MRX12P47084 519 aa12.91□□□□□ -0.34
VRG4YGL225W KRE5P22023 1365 aa12.91□□□□□ -0.34
VRG4YGL225W ALD4P46367 519 aaKnown RBP12.89□□□□□ -0.35
VRG4YGL225W RIA1P53893 1110 aa12.88□□□□□ -0.35
VRG4YGL225W NUP192P47054 1683 aa12.88□□□□□ -0.35
VRG4YGL225W RAD9P14737 1309 aa12.85□□□□□ -0.35
VRG4YGL225W YNR029CP53729 429 aaKnown RBP12.83□□□□□ -0.36
VRG4YGL225W CAB1Q04430 367 aa12.83□□□□□ -0.36
VRG4YGL225W ESL2P36168 1195 aa12.8□□□□□ -0.36
VRG4YGL225W NAP1P25293 417 aaKnown RBP12.74□□□□□ -0.37
VRG4YGL225W TAF5P38129 798 aa12.74□□□□□ -0.37
VRG4YGL225W TAF8Q03750 510 aa12.7□□□□□ -0.38
VRG4YGL225W PTP3P40048 928 aa12.67□□□□□ -0.38
VRG4YGL225W TY3B-IQ7LHG5 1498 aaKnown RBP12.65□□□□□ -0.38
VRG4YGL225W YAH1Q12184 172 aaKnown RBP12.62□□□□□ -0.39
VRG4YGL225W SPE2P21182 396 aa12.6□□□□□ -0.39
VRG4YGL225W CPS1P27614 576 aa12.6□□□□□ -0.39
VRG4YGL225W KIP3P53086 805 aaKnown RBP12.6□□□□□ -0.39
VRG4YGL225W RCM1P53972 490 aa12.58□□□□□ -0.4
VRG4YGL225W PPH3P32345 308 aa12.54□□□□□ -0.4
VRG4YGL225W SCT1P32784 759 aa12.53□□□□□ -0.4
VRG4YGL225W PSK1P31374 1356 aa12.53□□□□□ -0.4
VRG4YGL225W YLR419WQ06698 1435 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms