RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C MAM3Q12296 706 aa9.15□□□□□ -0.94
SCL1YGL011C SOL3P38858 249 aa9.14□□□□□ -0.95
SCL1YGL011C YGR273CP53329 174 aa9.14□□□□□ -0.95
SCL1YGL011C IES2P40154 320 aa9.13□□□□□ -0.95
SCL1YGL011C UBP14P38237 781 aaKnown RBP9.12□□□□□ -0.95
SCL1YGL011C YLR326WQ06170 240 aaKnown RBP9.12□□□□□ -0.95
SCL1YGL011C MAK21Q12176 1025 aaKnown RBP9.11□□□□□ -0.95
SCL1YGL011C YBL029C-AQ3E756 94 aa9.11□□□□□ -0.95
SCL1YGL011C COX6P00427 148 aa9.1□□□□□ -0.95
SCL1YGL011C ABP1P15891 592 aaKnown RBP9.1□□□□□ -0.95
SCL1YGL011C YDR090CQ03193 310 aa9.1□□□□□ -0.95
SCL1YGL011C MSB4Q12317 492 aa9.1□□□□□ -0.95
SCL1YGL011C HTA1P04911 132 aaKnown RBP9.08□□□□□ -0.96
SCL1YGL011C HTA2P04912 132 aa9.08□□□□□ -0.96
SCL1YGL011C NST1P53935 1240 aa9.08□□□□□ -0.96
SCL1YGL011C NUP42P49686 430 aaKnown RBP9.06□□□□□ -0.96
SCL1YGL011C KEX1P09620 729 aa9.05□□□□□ -0.96
SCL1YGL011C YNR021WP53723 404 aaKnown RBP9.05□□□□□ -0.96
SCL1YGL011C DIT2P21595 489 aa9.04□□□□□ -0.96
SCL1YGL011C VNX1P42839 908 aa9.04□□□□□ -0.96
SCL1YGL011C GLC3P32775 704 aa9.02□□□□□ -0.97
SCL1YGL011C RAD54P32863 898 aa9.02□□□□□ -0.97
SCL1YGL011C ILV3P39522 585 aaKnown RBP9.02□□□□□ -0.97
SCL1YGL011C PCS60P38137 543 aaKnown RBP RIP-Chip data9.01□□□□□ -0.97not detected
SCL1YGL011C KIC1P38692 1080 aa9.01□□□□□ -0.97
SCL1YGL011C TRP5P00931 707 aaKnown RBP8.99□□□□□ -0.97
SCL1YGL011C EAP1P36041 632 aaKnown RBP8.99□□□□□ -0.97
SCL1YGL011C YEL023CP39992 682 aa8.99□□□□□ -0.97
SCL1YGL011C TAF7Q05021 590 aa8.99□□□□□ -0.97
SCL1YGL011C MPH3P0CE00 602 aa8.98□□□□□ -0.97
SCL1YGL011C AI4P03878 556 aa8.97□□□□□ -0.97
SCL1YGL011C TIF11P38912 153 aaKnown RBP8.97□□□□□ -0.97
SCL1YGL011C ULI1P43604 169 aa8.96□□□□□ -0.98
SCL1YGL011C SPP1Q03012 353 aa8.96□□□□□ -0.98
SCL1YGL011C KIN1P13185 1064 aa8.94□□□□□ -0.98
SCL1YGL011C AIM7Q12156 149 aa8.92□□□□□ -0.98
SCL1YGL011C DAN4P47179 1161 aa8.91□□□□□ -0.98
SCL1YGL011C PTC4P38089 393 aa8.9□□□□□ -0.98
SCL1YGL011C ORC6P38826 435 aa8.9□□□□□ -0.98
SCL1YGL011C IOC2Q12072 812 aa8.9□□□□□ -0.98
SCL1YGL011C SLI15P38283 698 aa8.89□□□□□ -0.99
SCL1YGL011C DMA2P53924 522 aa8.88□□□□□ -0.99
SCL1YGL011C JIP4Q03361 876 aa8.88□□□□□ -0.99
SCL1YGL011C ATF2P53296 535 aa8.87□□□□□ -0.99
SCL1YGL011C PSE1P32337 1089 aaKnown RBP8.86□□□□□ -0.99
SCL1YGL011C YNL035CP53962 389 aaKnown RBP8.83□□□□□ -1
SCL1YGL011C LDB19Q12502 818 aa8.83□□□□□ -1
SCL1YGL011C CDC73Q06697 393 aa8.81□□□□□ -1
SCL1YGL011C RTG1P32607 177 aa8.8□□□□□ -1
SCL1YGL011C MID1P41821 548 aa8.79□□□□□ -1
SCL1YGL011C GAP1P19145 602 aaPredicted RBP8.78□□□□□ -1
SCL1YGL011C PML39Q03760 334 aa8.78□□□□□ -1
SCL1YGL011C RGR1P19263 1082 aa8.77□□□□□ -1.01
SCL1YGL011C GUA1P38625 525 aaKnown RBP8.76□□□□□ -1.01
SCL1YGL011C MVP1P40959 511 aaKnown RBP8.76□□□□□ -1.01
SCL1YGL011C RPP1BP10622 106 aaKnown RBP8.74□□□□□ -1.01
SCL1YGL011C SEC61P32915 480 aa8.74□□□□□ -1.01
SCL1YGL011C CSC1Q06538 782 aa8.74□□□□□ -1.01
SCL1YGL011C TEA1P47988 759 aa8.73□□□□□ -1.01
SCL1YGL011C MPC54Q08550 464 aa8.72□□□□□ -1.01
SCL1YGL011C DPL1Q05567 589 aa8.7□□□□□ -1.02
SCL1YGL011C FKH1P40466 484 aa8.69□□□□□ -1.02
SCL1YGL011C PEX29Q03370 554 aa8.69□□□□□ -1.02
SCL1YGL011C YPR109WQ06104 294 aa8.69□□□□□ -1.02
SCL1YGL011C NCR1Q12200 1170 aa8.69□□□□□ -1.02
SCL1YGL011C CLB5P30283 435 aa8.68□□□□□ -1.02
SCL1YGL011C TFB4Q12004 338 aa8.68□□□□□ -1.02
SCL1YGL011C PEX21P50091 288 aa8.67□□□□□ -1.02
SCL1YGL011C TFG1P41895 735 aaPredicted RBP8.66□□□□□ -1.02
SCL1YGL011C YDL129WQ07555 291 aa8.66□□□□□ -1.02
SCL1YGL011C TUM1Q08686 304 aaKnown RBP8.65□□□□□ -1.02
SCL1YGL011C CSN12P47130 423 aa8.64□□□□□ -1.03
SCL1YGL011C NIS1P53939 407 aa8.64□□□□□ -1.03
SCL1YGL011C HPC2Q01448 625 aa8.64□□□□□ -1.03
SCL1YGL011C KTR1P27810 393 aaKnown RBP8.62□□□□□ -1.03
SCL1YGL011C NMA111P53920 997 aa8.62□□□□□ -1.03
SCL1YGL011C YRR1Q12172 810 aa8.62□□□□□ -1.03
SCL1YGL011C TFB3Q03290 321 aa8.61□□□□□ -1.03
SCL1YGL011C TYW1Q08960 810 aaKnown RBP8.61□□□□□ -1.03
SCL1YGL011C ISU2Q12056 156 aa8.61□□□□□ -1.03
SCL1YGL011C FPK1P53739 893 aa8.6□□□□□ -1.03
SCL1YGL011C YDR344CQ05510 147 aa8.6□□□□□ -1.03
SCL1YGL011C AIR2Q12476 344 aaKnown RBP8.6□□□□□ -1.03
SCL1YGL011C SSA2P10592 639 aaKnown RBP8.59□□□□□ -1.03
SCL1YGL011C SAP30P38429 201 aa8.59□□□□□ -1.03
SCL1YGL011C YMR196WQ04336 1088 aa8.59□□□□□ -1.03
SCL1YGL011C HGH1P48362 394 aaKnown RBP8.58□□□□□ -1.04
SCL1YGL011C HST2P53686 357 aa8.56□□□□□ -1.04
SCL1YGL011C PKC1P24583 1151 aa8.55□□□□□ -1.04
SCL1YGL011C BRL1P38770 471 aa8.55□□□□□ -1.04
SCL1YGL011C SIT4P20604 311 aa8.54□□□□□ -1.04
SCL1YGL011C SCJ1P25303 377 aa8.54□□□□□ -1.04
SCL1YGL011C GLN1P32288 370 aaKnown RBP8.54□□□□□ -1.04
SCL1YGL011C HAP5Q02516 242 aa8.54□□□□□ -1.04
SCL1YGL011C PDR1P12383 1068 aa8.53□□□□□ -1.04
SCL1YGL011C ARH1P48360 493 aa8.53□□□□□ -1.04
SCL1YGL011C MMP1Q12372 583 aa8.53□□□□□ -1.04
SCL1YGL011C ESS1P22696 170 aa8.52□□□□□ -1.05
SCL1YGL011C NUD1P32336 851 aa8.51□□□□□ -1.05
SCL1YGL011C RLF2Q12495 606 aa8.5□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms