RNA–Protein interactions for RNA: YGL004C

RPN14, Transcript of Assembly chaperone for the 19S proteasome regulatory particle base, yeastyeast

Gene RPN14, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN14YGL004C TY1B-MR2Q04670 1755 aaKnown RBP12.25□□□□□ -0.45
RPN14YGL004C TY1B-LR1Q12088 1755 aaKnown RBP12.25□□□□□ -0.45
RPN14YGL004C TY1B-NL1Q12112 1755 aa12.25□□□□□ -0.45
RPN14YGL004C TY1B-GR1Q12141 1755 aa12.25□□□□□ -0.45
RPN14YGL004C TY1B-BLQ12490 1755 aa12.25□□□□□ -0.45
RPN14YGL004C RPA190P10964 1664 aaKnown RBP12.22□□□□□ -0.45
RPN14YGL004C NTE1Q04958 1679 aa12.21□□□□□ -0.45
RPN14YGL004C GEA2P39993 1459 aaKnown RBP12.21□□□□□ -0.46
RPN14YGL004C DNF1P32660 1571 aa12.2□□□□□ -0.46
RPN14YGL004C RPO21P04050 1733 aaKnown RBP12.17□□□□□ -0.46
RPN14YGL004C NUP170P38181 1502 aa12.16□□□□□ -0.46
RPN14YGL004C NUP159P40477 1460 aa12.14□□□□□ -0.47
RPN14YGL004C CAT8P39113 1433 aa12.14□□□□□ -0.47
RPN14YGL004C MET5P47169 1442 aa12.11□□□□□ -0.47
RPN14YGL004C VPS15P22219 1454 aa12.09□□□□□ -0.47
RPN14YGL004C MET10P39692 1035 aa12.09□□□□□ -0.47
RPN14YGL004C IRC20Q06554 1556 aa12.09□□□□□ -0.47
RPN14YGL004C TY3B-GQ99315 1547 aa12.07□□□□□ -0.48
RPN14YGL004C SSM4P40318 1319 aa12.06□□□□□ -0.48
RPN14YGL004C YBT1P32386 1661 aa12.03□□□□□ -0.48
RPN14YGL004C PDR12Q02785 1511 aa12.01□□□□□ -0.49
RPN14YGL004C FAP1P53971 965 aa11.98□□□□□ -0.49
RPN14YGL004C SRB8P25648 1427 aa11.97□□□□□ -0.49
RPN14YGL004C PDR10P51533 1564 aa11.96□□□□□ -0.5
RPN14YGL004C NUP157P40064 1391 aaKnown RBP11.95□□□□□ -0.5
RPN14YGL004C GDB1Q06625 1536 aa11.95□□□□□ -0.5
RPN14YGL004C CKB1P43639 278 aa11.94□□□□□ -0.5
RPN14YGL004C YRF1-1P0CX20 1796 aa11.93□□□□□ -0.5
RPN14YGL004C YRF1-5P0CX21 1796 aa11.93□□□□□ -0.5
RPN14YGL004C YRF1-8P0CX22 1796 aa11.93□□□□□ -0.5
RPN14YGL004C SPO14P36126 1683 aa11.93□□□□□ -0.5
RPN14YGL004C ARO1P08566 1588 aaKnown RBP11.91□□□□□ -0.5
RPN14YGL004C BUD3P25558 1636 aa11.88□□□□□ -0.51
RPN14YGL004C MMS1Q06211 1407 aa11.87□□□□□ -0.51
RPN14YGL004C BUD21Q08492 214 aaPredicted RBP11.86□□□□□ -0.51
RPN14YGL004C IQG1Q12280 1495 aa11.83□□□□□ -0.52
RPN14YGL004C LTE1P07866 1435 aa11.83□□□□□ -0.52
RPN14YGL004C GCN2P15442 1659 aa11.78□□□□□ -0.52
RPN14YGL004C YSP2Q06681 1438 aa11.77□□□□□ -0.52
RPN14YGL004C BFR2Q06631 534 aaKnown RBP11.77□□□□□ -0.53
RPN14YGL004C BNR1P40450 1375 aa11.73□□□□□ -0.53
RPN14YGL004C NOP7P53261 605 aaKnown RBP11.72□□□□□ -0.53
RPN14YGL004C TRM3Q07527 1436 aa11.71□□□□□ -0.53
RPN14YGL004C DRS2P39524 1355 aa11.71□□□□□ -0.53
RPN14YGL004C PAF1P38351 445 aa11.7□□□□□ -0.54
RPN14YGL004C DIP2Q12220 943 aaPredicted RBP11.7□□□□□ -0.54
RPN14YGL004C POL5P39985 1022 aaKnown RBP11.69□□□□□ -0.54
RPN14YGL004C SEC7P11075 2009 aaKnown RBP11.68□□□□□ -0.54
RPN14YGL004C DOP1Q03921 1698 aa11.65□□□□□ -0.55
RPN14YGL004C CHC1P22137 1653 aaKnown RBP11.58□□□□□ -0.56
RPN14YGL004C YOR093CQ12275 1648 aa11.57□□□□□ -0.56
RPN14YGL004C PDR5P33302 1511 aaKnown RBP11.55□□□□□ -0.56
RPN14YGL004C URN1Q06525 465 aaKnown RBP11.54□□□□□ -0.56
RPN14YGL004C ITT1Q04638 464 aa11.5□□□□□ -0.57
RPN14YGL004C AVT3P36062 692 aa11.49□□□□□ -0.57
RPN14YGL004C RAV1P47104 1357 aa11.48□□□□□ -0.57
RPN14YGL004C SEC3P33332 1336 aaKnown RBP11.47□□□□□ -0.57
RPN14YGL004C SCT1P32784 759 aa11.47□□□□□ -0.57
RPN14YGL004C NUP188P52593 1655 aaKnown RBP11.46□□□□□ -0.57
RPN14YGL004C DNF2Q12675 1612 aa11.46□□□□□ -0.58
RPN14YGL004C RTC1Q08281 1341 aa11.45□□□□□ -0.58
RPN14YGL004C BNI1P41832 1953 aa11.43□□□□□ -0.58
RPN14YGL004C IML1P47170 1584 aa11.43□□□□□ -0.58
RPN14YGL004C VMR1P38735 1592 aa11.41□□□□□ -0.58
RPN14YGL004C ESL2P36168 1195 aa11.39□□□□□ -0.59
RPN14YGL004C IPL1P38991 367 aa11.36□□□□□ -0.59
RPN14YGL004C MHP1P43638 1398 aa11.35□□□□□ -0.59
RPN14YGL004C PDR11P40550 1411 aa11.35□□□□□ -0.59
RPN14YGL004C ENP1P38333 483 aaKnown RBP11.34□□□□□ -0.59
RPN14YGL004C YAP3P38749 330 aa11.34□□□□□ -0.59
RPN14YGL004C TAF5P38129 798 aa11.33□□□□□ -0.6
RPN14YGL004C TY3B-IQ7LHG5 1498 aaKnown RBP11.32□□□□□ -0.6
RPN14YGL004C ORC1P54784 914 aaPredicted RBP11.3□□□□□ -0.6
RPN14YGL004C NAP1P25293 417 aaKnown RBP11.28□□□□□ -0.6
RPN14YGL004C TYS1P36421 394 aaKnown RBP11.28□□□□□ -0.6
RPN14YGL004C PRI1P10363 409 aa11.27□□□□□ -0.61
RPN14YGL004C KIP3P53086 805 aaKnown RBP11.27□□□□□ -0.61
RPN14YGL004C HAP1P0CE41 1502 aa11.26□□□□□ -0.61
RPN14YGL004C SPT7P35177 1332 aa11.26□□□□□ -0.61
RPN14YGL004C PRY3P47033 881 aa11.25□□□□□ -0.61
RPN14YGL004C NSR1P27476 414 aaKnown RBP RIP-Chip data11.24□□□□□ -0.61not detected
RPN14YGL004C YLR419WQ06698 1435 aaKnown RBP11.23□□□□□ -0.61
RPN14YGL004C ALD4P46367 519 aaKnown RBP11.2□□□□□ -0.62
RPN14YGL004C PDS5Q04264 1277 aa11.2□□□□□ -0.62
RPN14YGL004C ISW2Q08773 1120 aa11.2□□□□□ -0.62
RPN14YGL004C NUP192P47054 1683 aa11.2□□□□□ -0.62
RPN14YGL004C SPE2P21182 396 aa11.19□□□□□ -0.62
RPN14YGL004C AAD16Q02895 342 aa11.19□□□□□ -0.62
RPN14YGL004C BCK1Q01389 1478 aa11.15□□□□□ -0.62
RPN14YGL004C MRX12P47084 519 aa11.15□□□□□ -0.62
RPN14YGL004C TAF8Q03750 510 aa11.15□□□□□ -0.62
RPN14YGL004C DNF3Q12674 1656 aa11.14□□□□□ -0.63
RPN14YGL004C RAD9P14737 1309 aa11.13□□□□□ -0.63
RPN14YGL004C ABP1P15891 592 aaKnown RBP11.13□□□□□ -0.63
RPN14YGL004C PSD2P53037 1138 aaKnown RBP11.12□□□□□ -0.63
RPN14YGL004C CAB1Q04430 367 aa11.11□□□□□ -0.63
RPN14YGL004C LEU3P08638 886 aa11.1□□□□□ -0.63
RPN14YGL004C RPG1P38249 964 aaKnown RBP11.1□□□□□ -0.63
RPN14YGL004C CHZ1P40019 153 aaPredicted RBP11.08□□□□□ -0.64
RPN14YGL004C MAK10Q02197 733 aa11.07□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 6.4 ms