RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W RTT106P40161 455 aa9.33□□□□□ -0.92
RGD2YFL047W TY1B-JR2P47100 1755 aaKnown RBP9.32□□□□□ -0.92
RGD2YFL047W TY1B-ER2Q03619 1755 aa9.32□□□□□ -0.92
RGD2YFL047W TY1B-MR1Q04214 1755 aa9.32□□□□□ -0.92
RGD2YFL047W TY1B-MR2Q04670 1755 aaKnown RBP9.32□□□□□ -0.92
RGD2YFL047W TY1B-LR1Q12088 1755 aaKnown RBP9.32□□□□□ -0.92
RGD2YFL047W TY1B-NL1Q12112 1755 aa9.32□□□□□ -0.92
RGD2YFL047W TY1B-GR1Q12141 1755 aa9.32□□□□□ -0.92
RGD2YFL047W TY1B-BLQ12490 1755 aa9.32□□□□□ -0.92
RGD2YFL047W GEA2P39993 1459 aaKnown RBP9.3□□□□□ -0.92
RGD2YFL047W IRC20Q06554 1556 aa9.3□□□□□ -0.92
RGD2YFL047W CAT8P39113 1433 aa9.29□□□□□ -0.92
RGD2YFL047W DNF1P32660 1571 aa9.29□□□□□ -0.92
RGD2YFL047W POL5P39985 1022 aaKnown RBP9.28□□□□□ -0.92
RGD2YFL047W YBT1P32386 1661 aa9.27□□□□□ -0.93
RGD2YFL047W GDB1Q06625 1536 aa9.25□□□□□ -0.93
RGD2YFL047W RPA190P10964 1664 aaKnown RBP9.23□□□□□ -0.93
RGD2YFL047W SRB8P25648 1427 aa9.22□□□□□ -0.93
RGD2YFL047W CKB1P43639 278 aa9.2□□□□□ -0.94
RGD2YFL047W MTC1P47018 478 aaKnown RBP9.2□□□□□ -0.94
RGD2YFL047W NUP159P40477 1460 aa9.2□□□□□ -0.94
RGD2YFL047W NTE1Q04958 1679 aa9.19□□□□□ -0.94
RGD2YFL047W RPO21P04050 1733 aaKnown RBP9.19□□□□□ -0.94
RGD2YFL047W NOP2P40991 618 aaKnown RBP9.18□□□□□ -0.94
RGD2YFL047W ARO1P08566 1588 aaKnown RBP9.18□□□□□ -0.94
RGD2YFL047W MET10P39692 1035 aa9.17□□□□□ -0.94
RGD2YFL047W PDR10P51533 1564 aa9.17□□□□□ -0.94
RGD2YFL047W ENP1P38333 483 aaKnown RBP9.15□□□□□ -0.94
RGD2YFL047W NUP157P40064 1391 aaKnown RBP9.14□□□□□ -0.95
RGD2YFL047W PDR12Q02785 1511 aa9.13□□□□□ -0.95
RGD2YFL047W SPT7P35177 1332 aa9.13□□□□□ -0.95
RGD2YFL047W BUD21Q08492 214 aaPredicted RBP9.12□□□□□ -0.95
RGD2YFL047W YSP2Q06681 1438 aa9.11□□□□□ -0.95
RGD2YFL047W SPO14P36126 1683 aa9.08□□□□□ -0.96
RGD2YFL047W SEC3P33332 1336 aaKnown RBP9.08□□□□□ -0.96
RGD2YFL047W BUD3P25558 1636 aa9.07□□□□□ -0.96
RGD2YFL047W GCN2P15442 1659 aa9.07□□□□□ -0.96
RGD2YFL047W MMS1Q06211 1407 aa9.06□□□□□ -0.96
RGD2YFL047W NOP7P53261 605 aaKnown RBP9.06□□□□□ -0.96
RGD2YFL047W IQG1Q12280 1495 aa9.05□□□□□ -0.96
RGD2YFL047W YRF1-1P0CX20 1796 aa9.02□□□□□ -0.97
RGD2YFL047W YRF1-5P0CX21 1796 aa9.02□□□□□ -0.97
RGD2YFL047W YRF1-8P0CX22 1796 aa9.02□□□□□ -0.97
RGD2YFL047W MET5P47169 1442 aa9.01□□□□□ -0.97
RGD2YFL047W PDR5P33302 1511 aaKnown RBP9□□□□□ -0.97
RGD2YFL047W ORC1P54784 914 aaPredicted RBP8.98□□□□□ -0.97
RGD2YFL047W BFR2Q06631 534 aaKnown RBP8.97□□□□□ -0.97
RGD2YFL047W PAF1P38351 445 aa8.96□□□□□ -0.97
RGD2YFL047W PSD2P53037 1138 aaKnown RBP8.96□□□□□ -0.98
RGD2YFL047W BNR1P40450 1375 aa8.96□□□□□ -0.98
RGD2YFL047W LTE1P07866 1435 aa8.95□□□□□ -0.98
RGD2YFL047W MHP1P43638 1398 aa8.95□□□□□ -0.98
RGD2YFL047W PRS1P32895 427 aaKnown RBP8.95□□□□□ -0.98
RGD2YFL047W LEU3P08638 886 aa8.94□□□□□ -0.98
RGD2YFL047W PDR11P40550 1411 aa8.92□□□□□ -0.98
RGD2YFL047W YOR093CQ12275 1648 aa8.91□□□□□ -0.98
RGD2YFL047W RAV1P47104 1357 aa8.9□□□□□ -0.98
RGD2YFL047W TY3B-IQ7LHG5 1498 aaKnown RBP8.9□□□□□ -0.98
RGD2YFL047W RTC1Q08281 1341 aa8.89□□□□□ -0.99
RGD2YFL047W YLR419WQ06698 1435 aaKnown RBP8.88□□□□□ -0.99
RGD2YFL047W TAF5P38129 798 aa8.86□□□□□ -0.99
RGD2YFL047W DRS2P39524 1355 aa8.85□□□□□ -0.99
RGD2YFL047W PDS5Q04264 1277 aa8.84□□□□□ -0.99
RGD2YFL047W CHC1P22137 1653 aaKnown RBP8.83□□□□□ -1
RGD2YFL047W NST1P53935 1240 aa8.83□□□□□ -1
RGD2YFL047W SEC7P11075 2009 aaKnown RBP8.82□□□□□ -1
RGD2YFL047W VMR1P38735 1592 aa8.82□□□□□ -1
RGD2YFL047W KIP3P53086 805 aaKnown RBP8.81□□□□□ -1
RGD2YFL047W ESL2P36168 1195 aa8.79□□□□□ -1
RGD2YFL047W IML1P47170 1584 aa8.76□□□□□ -1.01
RGD2YFL047W TRM3Q07527 1436 aa8.75□□□□□ -1.01
RGD2YFL047W NUP192P47054 1683 aa8.73□□□□□ -1.01
RGD2YFL047W NUP188P52593 1655 aaKnown RBP8.73□□□□□ -1.01
RGD2YFL047W TYS1P36421 394 aaKnown RBP8.72□□□□□ -1.01
RGD2YFL047W SPE2P21182 396 aa8.72□□□□□ -1.01
RGD2YFL047W YAP3P38749 330 aa8.71□□□□□ -1.02
RGD2YFL047W DNF2Q12675 1612 aa8.7□□□□□ -1.02
RGD2YFL047W DOP1Q03921 1698 aa8.69□□□□□ -1.02
RGD2YFL047W CFT1Q06632 1357 aaKnown RBP8.68□□□□□ -1.02
RGD2YFL047W IPL1P38991 367 aa8.68□□□□□ -1.02
RGD2YFL047W RTG3P38165 486 aa8.68□□□□□ -1.02
RGD2YFL047W FUN12P39730 1002 aaKnown RBP8.66□□□□□ -1.02
RGD2YFL047W TAF8Q03750 510 aa8.66□□□□□ -1.02
RGD2YFL047W RAD9P14737 1309 aa8.65□□□□□ -1.02
RGD2YFL047W ALD4P46367 519 aaKnown RBP8.65□□□□□ -1.03
RGD2YFL047W SCT1P32784 759 aa8.63□□□□□ -1.03
RGD2YFL047W FKH1P40466 484 aa8.63□□□□□ -1.03
RGD2YFL047W ITT1Q04638 464 aa8.63□□□□□ -1.03
RGD2YFL047W CHZ1P40019 153 aaPredicted RBP8.63□□□□□ -1.03
RGD2YFL047W YEF3P16521 1044 aaKnown RBP8.62□□□□□ -1.03
RGD2YFL047W TFA1P36100 482 aa8.62□□□□□ -1.03
RGD2YFL047W BCK1Q01389 1478 aa8.61□□□□□ -1.03
RGD2YFL047W RPP0P05317 312 aaKnown RBP8.61□□□□□ -1.03
RGD2YFL047W TRK1P12685 1235 aa8.6□□□□□ -1.03
RGD2YFL047W URN1Q06525 465 aaKnown RBP8.6□□□□□ -1.03
RGD2YFL047W CDC45Q08032 650 aa8.6□□□□□ -1.03
RGD2YFL047W RVB2Q12464 471 aaKnown RBP8.6□□□□□ -1.03
RGD2YFL047W VPS27P40343 622 aaKnown RBP8.6□□□□□ -1.03
RGD2YFL047W CAB1Q04430 367 aa8.59□□□□□ -1.03
RGD2YFL047W IOC4Q04213 475 aa8.58□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms