RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W KIN1P13185 1064 aa6.65□□□□□ -1.35
CDC4YFL009W IES2P40154 320 aa6.65□□□□□ -1.35
CDC4YFL009W YOR238WQ08634 303 aa6.65□□□□□ -1.35
CDC4YFL009W GLC3P32775 704 aa6.64□□□□□ -1.35
CDC4YFL009W HSL1P34244 1518 aa6.64□□□□□ -1.35
CDC4YFL009W MAM3Q12296 706 aa6.64□□□□□ -1.35
CDC4YFL009W SPT6P23615 1451 aaKnown RBP6.62□□□□□ -1.35
CDC4YFL009W TY1B-DR4Q07793 1604 aa6.62□□□□□ -1.35
CDC4YFL009W TRM732Q03496 1420 aa6.61□□□□□ -1.35
CDC4YFL009W YDR090CQ03193 310 aa6.61□□□□□ -1.35
CDC4YFL009W AIM7Q12156 149 aa6.61□□□□□ -1.35
CDC4YFL009W IKI3Q06706 1349 aaKnown RBP6.6□□□□□ -1.35
CDC4YFL009W SPP41P38904 1435 aa6.6□□□□□ -1.35
CDC4YFL009W COX6P00427 148 aa6.6□□□□□ -1.35
CDC4YFL009W SIS2P36024 562 aa6.6□□□□□ -1.35
CDC4YFL009W PIB1Q06651 286 aa6.59□□□□□ -1.35
CDC4YFL009W UBP14P38237 781 aaKnown RBP6.59□□□□□ -1.36
CDC4YFL009W STH1P32597 1359 aa6.58□□□□□ -1.36
CDC4YFL009W VMA1P17255 1071 aaKnown RBP6.58□□□□□ -1.36
CDC4YFL009W URN1Q06525 465 aaKnown RBP6.58□□□□□ -1.36
CDC4YFL009W POL5P39985 1022 aaKnown RBP6.56□□□□□ -1.36
CDC4YFL009W HIR3P47171 1648 aa6.56□□□□□ -1.36
CDC4YFL009W GUA1P38625 525 aaKnown RBP6.56□□□□□ -1.36
CDC4YFL009W MAK21Q12176 1025 aaKnown RBP6.55□□□□□ -1.36
CDC4YFL009W RLF2Q12495 606 aa6.55□□□□□ -1.36
CDC4YFL009W YLR326WQ06170 240 aaKnown RBP6.54□□□□□ -1.36
CDC4YFL009W SOL3P38858 249 aa6.54□□□□□ -1.36
CDC4YFL009W TAF2P23255 1407 aa6.54□□□□□ -1.36
CDC4YFL009W VHR2P40041 505 aa6.53□□□□□ -1.36
CDC4YFL009W REV3P14284 1504 aa6.53□□□□□ -1.36
CDC4YFL009W SEC3P33332 1336 aaKnown RBP6.53□□□□□ -1.36
CDC4YFL009W SPT7P35177 1332 aa6.53□□□□□ -1.36
CDC4YFL009W YAP5P40574 245 aa6.53□□□□□ -1.36
CDC4YFL009W TGL3P40308 642 aa6.52□□□□□ -1.37
CDC4YFL009W STU1P38198 1513 aa6.52□□□□□ -1.37
CDC4YFL009W NST1P53935 1240 aa6.51□□□□□ -1.37
CDC4YFL009W YTA7P40340 1379 aa6.51□□□□□ -1.37
CDC4YFL009W THO2P53552 1597 aaKnown RBP6.51□□□□□ -1.37
CDC4YFL009W MON2P48563 1636 aaPredicted RBP6.51□□□□□ -1.37
CDC4YFL009W MYO2P19524 1574 aaKnown RBP6.51□□□□□ -1.37
CDC4YFL009W SSM4P40318 1319 aa6.51□□□□□ -1.37
CDC4YFL009W SAM3Q08986 587 aa6.5□□□□□ -1.37
CDC4YFL009W ECM5Q03214 1411 aa6.49□□□□□ -1.37
CDC4YFL009W TCB2P48231 1178 aa6.49□□□□□ -1.37
CDC4YFL009W TIF4632P39936 914 aaKnown RBP6.48□□□□□ -1.37
CDC4YFL009W YGR273CP53329 174 aa6.48□□□□□ -1.37
CDC4YFL009W SSK2P53599 1579 aa6.48□□□□□ -1.37
CDC4YFL009W GUT1P32190 709 aa6.48□□□□□ -1.37
CDC4YFL009W SIN3P22579 1536 aa6.47□□□□□ -1.37
CDC4YFL009W MST1P07236 462 aa6.47□□□□□ -1.37
CDC4YFL009W PCS60P38137 543 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37 RIP-Chip
CDC4YFL009W POL1P13382 1468 aa6.46□□□□□ -1.38
CDC4YFL009W GRE2Q12068 342 aaKnown RBP6.46□□□□□ -1.38
CDC4YFL009W BPT1P14772 1559 aa6.45□□□□□ -1.38
CDC4YFL009W PRS1P32895 427 aaKnown RBP6.45□□□□□ -1.38
CDC4YFL009W SCC2Q04002 1493 aa6.45□□□□□ -1.38
CDC4YFL009W RTT106P40161 455 aa6.45□□□□□ -1.38
CDC4YFL009W KEX1P09620 729 aa6.44□□□□□ -1.38
CDC4YFL009W ATH1P48016 1211 aa6.44□□□□□ -1.38
CDC4YFL009W HPC2Q01448 625 aa6.43□□□□□ -1.38
CDC4YFL009W NUP170P38181 1502 aa6.43□□□□□ -1.38
CDC4YFL009W MNN4P36044 1178 aa6.43□□□□□ -1.38
CDC4YFL009W ILV3P39522 585 aaKnown RBP6.43□□□□□ -1.38
CDC4YFL009W ATF2P53296 535 aa6.42□□□□□ -1.38
CDC4YFL009W ORC6P38826 435 aa6.42□□□□□ -1.38
CDC4YFL009W TFB3Q03290 321 aa6.42□□□□□ -1.38
CDC4YFL009W PKC1P24583 1151 aa6.4□□□□□ -1.38
CDC4YFL009W ESP1Q03018 1630 aa6.4□□□□□ -1.39
CDC4YFL009W KTR1P27810 393 aaKnown RBP6.39□□□□□ -1.39
CDC4YFL009W PSE1P32337 1089 aaKnown RBP6.39□□□□□ -1.39
CDC4YFL009W CLC1P17891 233 aa6.39□□□□□ -1.39
CDC4YFL009W GYP5Q12344 894 aa6.39□□□□□ -1.39
CDC4YFL009W PEP1P32319 1579 aa6.38□□□□□ -1.39
CDC4YFL009W RAD54P32863 898 aa6.37□□□□□ -1.39
CDC4YFL009W YOL036WQ08206 761 aa6.36□□□□□ -1.39
CDC4YFL009W GAP1P19145 602 aaPredicted RBP6.36□□□□□ -1.39
CDC4YFL009W PAN1P32521 1480 aa6.35□□□□□ -1.39
CDC4YFL009W GLN1P32288 370 aaKnown RBP6.35□□□□□ -1.39
CDC4YFL009W IME2P32581 645 aa6.35□□□□□ -1.39
CDC4YFL009W QCR6P00127 147 aa6.34□□□□□ -1.39
CDC4YFL009W BUD4P47136 1447 aa6.34□□□□□ -1.39
CDC4YFL009W RGR1P19263 1082 aa6.34□□□□□ -1.39
CDC4YFL009W DNA2P38859 1522 aa6.34□□□□□ -1.4
CDC4YFL009W SMC4Q12267 1418 aa6.33□□□□□ -1.4
CDC4YFL009W DCW1P36091 449 aa6.33□□□□□ -1.4
CDC4YFL009W MYO4P32492 1471 aa6.33□□□□□ -1.4
CDC4YFL009W PDR10P51533 1564 aa6.33□□□□□ -1.4
CDC4YFL009W MPH3P0CE00 602 aa6.32□□□□□ -1.4
CDC4YFL009W AI4P03878 556 aa6.32□□□□□ -1.4
CDC4YFL009W KIC1P38692 1080 aa6.32□□□□□ -1.4
CDC4YFL009W CSN12P47130 423 aa6.32□□□□□ -1.4
CDC4YFL009W YOR1P53049 1477 aa6.31□□□□□ -1.4
CDC4YFL009W SET4P42948 560 aa6.31□□□□□ -1.4
CDC4YFL009W MVP1P40959 511 aaKnown RBP6.31□□□□□ -1.4
CDC4YFL009W CFT1Q06632 1357 aaKnown RBP6.31□□□□□ -1.4
CDC4YFL009W SNQ2P32568 1501 aaKnown RBP6.3□□□□□ -1.4
CDC4YFL009W SRB8P25648 1427 aa6.3□□□□□ -1.4
CDC4YFL009W TYW1Q08960 810 aaKnown RBP6.3□□□□□ -1.4
CDC4YFL009W TSC11P40061 1430 aa6.3□□□□□ -1.4
CDC4YFL009W YPK9Q12697 1472 aa6.3□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 79.4 ms