RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W GYP5Q12344 894 aa2.96□□□□□ -1.94
SMC1YFL008W SAS10Q12136 610 aaPredicted RBP2.96□□□□□ -1.94
SMC1YFL008W RTG3P38165 486 aa2.96□□□□□ -1.94
SMC1YFL008W SAM3Q08986 587 aa2.96□□□□□ -1.94
SMC1YFL008W DPS1P04802 557 aaKnown RBP2.95□□□□□ -1.94
SMC1YFL008W MAK11P20484 414 aaKnown RBP2.95□□□□□ -1.94
SMC1YFL008W JIP4Q03361 876 aa2.95□□□□□ -1.94
SMC1YFL008W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
SMC1YFL008W HTA1P04911 132 aaKnown RBP2.94□□□□□ -1.94
SMC1YFL008W HTA2P04912 132 aa2.94□□□□□ -1.94
SMC1YFL008W YPR148CQ06523 435 aa2.94□□□□□ -1.94
SMC1YFL008W XDJ1P39102 459 aa2.92□□□□□ -1.94
SMC1YFL008W DAN4P47179 1161 aa2.92□□□□□ -1.94
SMC1YFL008W YEL023CP39992 682 aa2.92□□□□□ -1.94
SMC1YFL008W PML39Q03760 334 aa2.91□□□□□ -1.94
SMC1YFL008W YDR344CQ05510 147 aa2.91□□□□□ -1.94
SMC1YFL008W TY1B-DR4Q07793 1604 aa2.9□□□□□ -1.94
SMC1YFL008W PTC4P38089 393 aa2.9□□□□□ -1.95
SMC1YFL008W ILV3P39522 585 aaKnown RBP2.9□□□□□ -1.95
SMC1YFL008W PEX29Q03370 554 aa2.89□□□□□ -1.95
SMC1YFL008W COQ8P27697 501 aa2.88□□□□□ -1.95
SMC1YFL008W MON2P48563 1636 aaPredicted RBP2.88□□□□□ -1.95
SMC1YFL008W YDR090CQ03193 310 aa2.88□□□□□ -1.95
SMC1YFL008W PTC3P34221 468 aaKnown RBP2.87□□□□□ -1.95
SMC1YFL008W NOP53Q12080 455 aaKnown RBP2.87□□□□□ -1.95
SMC1YFL008W ABP1P15891 592 aaKnown RBP2.86□□□□□ -1.95
SMC1YFL008W UBP14P38237 781 aaKnown RBP2.86□□□□□ -1.95
SMC1YFL008W GAP1P19145 602 aaPredicted RBP2.86□□□□□ -1.95
SMC1YFL008W DMA1P38823 416 aa2.85□□□□□ -1.95
SMC1YFL008W MID1P41821 548 aa2.84□□□□□ -1.95
SMC1YFL008W MIF2P35201 549 aa2.84□□□□□ -1.96
SMC1YFL008W SET1P38827 1080 aaKnown RBP2.83□□□□□ -1.96
SMC1YFL008W GRE2Q12068 342 aaKnown RBP2.83□□□□□ -1.96
SMC1YFL008W ATH1P48016 1211 aa2.82□□□□□ -1.96
SMC1YFL008W YLR326WQ06170 240 aaKnown RBP2.82□□□□□ -1.96
SMC1YFL008W RGA2Q06407 1009 aa2.82□□□□□ -1.96
SMC1YFL008W YGR273CP53329 174 aa2.81□□□□□ -1.96
SMC1YFL008W MPH3P0CE00 602 aa2.79□□□□□ -1.96
SMC1YFL008W SPT23P35210 1082 aa2.79□□□□□ -1.96
SMC1YFL008W RGA1P39083 1007 aa2.79□□□□□ -1.96
SMC1YFL008W RAM1P22007 431 aa2.79□□□□□ -1.96
SMC1YFL008W GUT1P32190 709 aa2.79□□□□□ -1.96
SMC1YFL008W PCS60P38137 543 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
SMC1YFL008W AI4P03878 556 aa2.79□□□□□ -1.96
SMC1YFL008W ARH1P48360 493 aa2.79□□□□□ -1.96
SMC1YFL008W PTC2P39966 464 aaKnown RBP2.78□□□□□ -1.96
SMC1YFL008W NUP42P49686 430 aaKnown RBP2.78□□□□□ -1.97
SMC1YFL008W SRC1Q03707 834 aa2.78□□□□□ -1.97
SMC1YFL008W DSF2P38213 736 aa2.77□□□□□ -1.97
SMC1YFL008W SLI15P38283 698 aa2.77□□□□□ -1.97
SMC1YFL008W RAS1P01119 309 aa2.76□□□□□ -1.97
SMC1YFL008W KEX1P09620 729 aa2.76□□□□□ -1.97
SMC1YFL008W HAP5Q02516 242 aa2.76□□□□□ -1.97
SMC1YFL008W GBP2P25555 427 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
SMC1YFL008W ORC6P38826 435 aa2.75□□□□□ -1.97
SMC1YFL008W YPR015CQ12531 247 aa2.74□□□□□ -1.97
SMC1YFL008W COX6P00427 148 aa2.74□□□□□ -1.97
SMC1YFL008W SDH2P21801 266 aa2.73□□□□□ -1.97
SMC1YFL008W GYP1Q08484 637 aa2.72□□□□□ -1.97
SMC1YFL008W TRK1P12685 1235 aa2.71□□□□□ -1.98
SMC1YFL008W GAR1P28007 205 aaKnown RBP2.71□□□□□ -1.98
SMC1YFL008W NMA111P53920 997 aa2.7□□□□□ -1.98
SMC1YFL008W MPC54Q08550 464 aa2.7□□□□□ -1.98
SMC1YFL008W SEC2P17065 759 aa2.7□□□□□ -1.98
SMC1YFL008W BNI4P53858 892 aa2.7□□□□□ -1.98
SMC1YFL008W DIT2P21595 489 aa2.7□□□□□ -1.98
SMC1YFL008W RGR1P19263 1082 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-DR4O74302 440 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-HP0C2I4 478 aaKnown RBP2.69□□□□□ -1.98
SMC1YFL008W TY1A-AP0CX57 440 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-PR1P0CX58 440 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-ORP0CX59 440 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-PR2P0CX60 440 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-DR5P0CX65 440 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-ER2P0CX66 440 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-GR3P0CX67 440 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-LR1P0CX68 440 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-MR2P0CX69 440 aa2.69□□□□□ -1.98
SMC1YFL008W VHR2P40041 505 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-JR2P47099 440 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-DR1Q03856 440 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-ML1Q04706 440 aaKnown RBP2.69□□□□□ -1.98
SMC1YFL008W CDC73Q06697 393 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-BRQ12217 440 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-NL2Q12470 440 aa2.69□□□□□ -1.98
SMC1YFL008W TY1A-GR2Q12485 440 aa2.69□□□□□ -1.98
SMC1YFL008W REF2P42073 533 aaPredicted RBP2.69□□□□□ -1.98
SMC1YFL008W VPS70P47161 811 aa2.69□□□□□ -1.98
SMC1YFL008W MVP1P40959 511 aaKnown RBP2.68□□□□□ -1.98
SMC1YFL008W LEU3P08638 886 aa2.68□□□□□ -1.98
SMC1YFL008W IFH1P39520 1085 aa2.68□□□□□ -1.98
SMC1YFL008W YML082WQ04533 649 aaKnown RBP2.67□□□□□ -1.98
SMC1YFL008W PBS2P08018 668 aa2.67□□□□□ -1.98
SMC1YFL008W AGE1Q04412 482 aa2.67□□□□□ -1.98
SMC1YFL008W KTR1P27810 393 aaKnown RBP2.66□□□□□ -1.98
SMC1YFL008W STR2P47164 639 aa2.65□□□□□ -1.98
SMC1YFL008W SIT4P20604 311 aa2.65□□□□□ -1.99
SMC1YFL008W PDR1P12383 1068 aa2.65□□□□□ -1.99
SMC1YFL008W AMS1P22855 1083 aa2.65□□□□□ -1.99
SMC1YFL008W CKB1P43639 278 aa2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms