RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W YOL036WQ08206 761 aa12.55□□□□□ -0.4
LCP5YER127W WSC3Q12215 556 aa12.52□□□□□ -0.41
LCP5YER127W UBP14P38237 781 aaKnown RBP12.51□□□□□ -0.41
LCP5YER127W YGR273CP53329 174 aa12.51□□□□□ -0.41
LCP5YER127W YNR021WP53723 404 aaKnown RBP12.51□□□□□ -0.41
LCP5YER127W DIT2P21595 489 aa12.48□□□□□ -0.41
LCP5YER127W SOL3P38858 249 aa12.47□□□□□ -0.41
LCP5YER127W YLR326WQ06170 240 aaKnown RBP12.47□□□□□ -0.41
LCP5YER127W ABP1P15891 592 aaKnown RBP12.46□□□□□ -0.41
LCP5YER127W KIC1P38692 1080 aa12.46□□□□□ -0.41
LCP5YER127W NUP42P49686 430 aaKnown RBP12.46□□□□□ -0.41
LCP5YER127W YDR090CQ03193 310 aa12.46□□□□□ -0.41
LCP5YER127W GLC3P32775 704 aa12.45□□□□□ -0.42
LCP5YER127W HTA1P04911 132 aaKnown RBP12.44□□□□□ -0.42
LCP5YER127W HTA2P04912 132 aa12.44□□□□□ -0.42
LCP5YER127W MSB4Q12317 492 aa12.43□□□□□ -0.42
LCP5YER127W KEX1P09620 729 aa12.4□□□□□ -0.42
LCP5YER127W KIN1P13185 1064 aa12.4□□□□□ -0.42
LCP5YER127W RAD54P32863 898 aa12.4□□□□□ -0.42
LCP5YER127W DMA2P53924 522 aa12.4□□□□□ -0.42
LCP5YER127W YBL029C-AQ3E756 94 aa12.37□□□□□ -0.43
LCP5YER127W PCS60P38137 543 aaKnown RBP RIP-Chip data12.36□□□□□ -0.43not detected
LCP5YER127W ATF2P53296 535 aa12.35□□□□□ -0.43
LCP5YER127W EAP1P36041 632 aaKnown RBP12.33□□□□□ -0.44
LCP5YER127W NST1P53935 1240 aa12.33□□□□□ -0.44
LCP5YER127W AIM7Q12156 149 aa12.33□□□□□ -0.44
LCP5YER127W VNX1P42839 908 aa12.31□□□□□ -0.44
LCP5YER127W YEL023CP39992 682 aa12.3□□□□□ -0.44
LCP5YER127W MPH3P0CE00 602 aa12.29□□□□□ -0.44
LCP5YER127W UBP9P39967 754 aa12.29□□□□□ -0.44
LCP5YER127W TRP5P00931 707 aaKnown RBP12.27□□□□□ -0.45
LCP5YER127W AI4P03878 556 aa12.27□□□□□ -0.45
LCP5YER127W ULI1P43604 169 aa12.25□□□□□ -0.45
LCP5YER127W ILV3P39522 585 aaKnown RBP12.24□□□□□ -0.45
LCP5YER127W SPP1Q03012 353 aa12.24□□□□□ -0.45
LCP5YER127W TIF11P38912 153 aaKnown RBP12.23□□□□□ -0.45
LCP5YER127W PTC4P38089 393 aa12.22□□□□□ -0.45
LCP5YER127W DAN4P47179 1161 aa12.22□□□□□ -0.45
LCP5YER127W PSE1P32337 1089 aaKnown RBP12.19□□□□□ -0.46
LCP5YER127W SLI15P38283 698 aa12.16□□□□□ -0.46
LCP5YER127W JIP4Q03361 876 aa12.16□□□□□ -0.46
LCP5YER127W ORC6P38826 435 aa12.15□□□□□ -0.46
LCP5YER127W GUA1P38625 525 aaKnown RBP12.13□□□□□ -0.47
LCP5YER127W RPP1BP10622 106 aaKnown RBP12.1□□□□□ -0.47
LCP5YER127W IOC2Q12072 812 aa12.1□□□□□ -0.47
LCP5YER127W HGH1P48362 394 aaKnown RBP12.08□□□□□ -0.48
LCP5YER127W RGR1P19263 1082 aa12.07□□□□□ -0.48
LCP5YER127W TEA1P47988 759 aa12.07□□□□□ -0.48
LCP5YER127W YNL035CP53962 389 aaKnown RBP12.07□□□□□ -0.48
LCP5YER127W CDC73Q06697 393 aa12.05□□□□□ -0.48
LCP5YER127W MVP1P40959 511 aaKnown RBP12.04□□□□□ -0.48
LCP5YER127W LDB19Q12502 818 aa12.04□□□□□ -0.48
LCP5YER127W PML39Q03760 334 aa12.03□□□□□ -0.48
LCP5YER127W RTG1P32607 177 aa12.02□□□□□ -0.49
LCP5YER127W MID1P41821 548 aa12.02□□□□□ -0.49
LCP5YER127W CSC1Q06538 782 aa12.02□□□□□ -0.49
LCP5YER127W PEX21P50091 288 aa12□□□□□ -0.49
LCP5YER127W CSN12P47130 423 aa11.99□□□□□ -0.49
LCP5YER127W GAP1P19145 602 aaPredicted RBP11.98□□□□□ -0.49
LCP5YER127W YPR109WQ06104 294 aa11.98□□□□□ -0.49
LCP5YER127W CLB5P30283 435 aa11.97□□□□□ -0.49
LCP5YER127W HPC2Q01448 625 aa11.96□□□□□ -0.49
LCP5YER127W SEC61P32915 480 aa11.95□□□□□ -0.5
LCP5YER127W TFG1P41895 735 aaPredicted RBP11.95□□□□□ -0.5
LCP5YER127W PEX29Q03370 554 aa11.94□□□□□ -0.5
LCP5YER127W DPL1Q05567 589 aa11.94□□□□□ -0.5
LCP5YER127W TFB4Q12004 338 aa11.93□□□□□ -0.5
LCP5YER127W SSA2P10592 639 aaKnown RBP11.92□□□□□ -0.5
LCP5YER127W TFB3Q03290 321 aa11.92□□□□□ -0.5
LCP5YER127W TUM1Q08686 304 aaKnown RBP11.91□□□□□ -0.5
LCP5YER127W NCR1Q12200 1170 aa11.91□□□□□ -0.5
LCP5YER127W MPC54Q08550 464 aa11.9□□□□□ -0.5
LCP5YER127W BRL1P38770 471 aa11.89□□□□□ -0.51
LCP5YER127W TYW1Q08960 810 aaKnown RBP11.89□□□□□ -0.51
LCP5YER127W RLF2Q12495 606 aa11.89□□□□□ -0.51
LCP5YER127W NIS1P53939 407 aa11.88□□□□□ -0.51
LCP5YER127W YMR196WQ04336 1088 aa11.88□□□□□ -0.51
LCP5YER127W BUD31P25337 157 aaPredicted RBP11.87□□□□□ -0.51
LCP5YER127W FPK1P53739 893 aa11.84□□□□□ -0.51
LCP5YER127W ISU2Q12056 156 aa11.84□□□□□ -0.51
LCP5YER127W YRR1Q12172 810 aa11.84□□□□□ -0.51
LCP5YER127W KTR1P27810 393 aaKnown RBP11.83□□□□□ -0.52
LCP5YER127W NMA111P53920 997 aa11.83□□□□□ -0.52
LCP5YER127W YDL129WQ07555 291 aa11.83□□□□□ -0.52
LCP5YER127W GLN1P32288 370 aaKnown RBP11.82□□□□□ -0.52
LCP5YER127W PKC1P24583 1151 aa11.81□□□□□ -0.52
LCP5YER127W MMP1Q12372 583 aa11.79□□□□□ -0.52
LCP5YER127W SCJ1P25303 377 aa11.78□□□□□ -0.52
LCP5YER127W HST2P53686 357 aa11.78□□□□□ -0.52
LCP5YER127W ESS1P22696 170 aa11.75□□□□□ -0.53
LCP5YER127W SAP30P38429 201 aa11.75□□□□□ -0.53
LCP5YER127W SIT4P20604 311 aa11.73□□□□□ -0.53
LCP5YER127W FKH1P40466 484 aa11.73□□□□□ -0.53
LCP5YER127W PKH3Q03306 898 aaPredicted RBP11.73□□□□□ -0.53
LCP5YER127W YJL007CP47080 104 aa11.71□□□□□ -0.53
LCP5YER127W HAP5Q02516 242 aa11.69□□□□□ -0.54
LCP5YER127W SLY41P22215 453 aa11.68□□□□□ -0.54
LCP5YER127W PDR1P12383 1068 aa11.67□□□□□ -0.54
LCP5YER127W YJU3P28321 313 aa11.67□□□□□ -0.54
LCP5YER127W NUD1P32336 851 aa11.67□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms