RNA–Protein interactions for RNA: YER116C

SLX8, Transcript of Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex, yeast

Gene SLX8, Length 825 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX8	YER116C	YNL035C	P53962	389 aa	Known RBP	6.15	□□□□□ -1.42
SLX8	YER116C	IOC4	Q04213	475 aa		6.14	□□□□□ -1.43
SLX8	YER116C	RCR1	P38212	213 aa		6.12	□□□□□ -1.43
SLX8	YER116C	JIP4	Q03361	876 aa		6.12	□□□□□ -1.43
SLX8	YER116C	NCR1	Q12200	1170 aa		6.12	□□□□□ -1.43
SLX8	YER116C	TFG1	P41895	735 aa	Predicted RBP	6.09	□□□□□ -1.43
SLX8	YER116C	GYP5	Q12344	894 aa		6.09	□□□□□ -1.43
SLX8	YER116C	HTA1	P04911	132 aa	Known RBP	6.08	□□□□□ -1.44
SLX8	YER116C	HTA2	P04912	132 aa		6.08	□□□□□ -1.44
SLX8	YER116C	DAN4	P47179	1161 aa		6.06	□□□□□ -1.44
SLX8	YER116C	MAK11	P20484	414 aa	Known RBP	6.04	□□□□□ -1.44
SLX8	YER116C	PTC4	P38089	393 aa		6.03	□□□□□ -1.44
SLX8	YER116C	YDL129W	Q07555	291 aa		6.01	□□□□□ -1.45
SLX8	YER116C	YEL023C	P39992	682 aa		6	□□□□□ -1.45
SLX8	YER116C	ORC1	P54784	914 aa	Predicted RBP	6	□□□□□ -1.45
SLX8	YER116C	GRE2	Q12068	342 aa	Known RBP	6	□□□□□ -1.45
SLX8	YER116C	DCW1	P36091	449 aa		5.99	□□□□□ -1.45
SLX8	YER116C	CKB1	P43639	278 aa		5.99	□□□□□ -1.45
SLX8	YER116C	RAM2	P29703	316 aa		5.97	□□□□□ -1.45
SLX8	YER116C	GUT1	P32190	709 aa		5.97	□□□□□ -1.45
SLX8	YER116C	SAP30	P38429	201 aa		5.96	□□□□□ -1.46
SLX8	YER116C	URN1	Q06525	465 aa	Known RBP	5.96	□□□□□ -1.46
SLX8	YER116C	CHL1	P22516	861 aa	Predicted RBP	5.95	□□□□□ -1.46
SLX8	YER116C	MIF2	P35201	549 aa		5.95	□□□□□ -1.46
SLX8	YER116C	ATH1	P48016	1211 aa		5.95	□□□□□ -1.46
SLX8	YER116C	NOP53	Q12080	455 aa	Known RBP	5.95	□□□□□ -1.46
SLX8	YER116C	PTC3	P34221	468 aa	Known RBP	5.94	□□□□□ -1.46
SLX8	YER116C	YML020W	Q03722	664 aa		5.94	□□□□□ -1.46
SLX8	YER116C	SPB4	P25808	606 aa	Predicted RBP	5.93	□□□□□ -1.46
SLX8	YER116C	PRE3	P38624	215 aa		5.93	□□□□□ -1.46
SLX8	YER116C	COQ8	P27697	501 aa		5.91	□□□□□ -1.46
SLX8	YER116C	EDS1	P38073	919 aa		5.91	□□□□□ -1.46
SLX8	YER116C	BCK2	P33306	851 aa		5.9	□□□□□ -1.46
SLX8	YER116C	AI4	P03878	556 aa		5.86	□□□□□ -1.47
SLX8	YER116C	NST1	P53935	1240 aa		5.86	□□□□□ -1.47
SLX8	YER116C	PML39	Q03760	334 aa		5.86	□□□□□ -1.47
SLX8	YER116C	MPH3	P0CE00	602 aa		5.85	□□□□□ -1.47
SLX8	YER116C	NOP8	Q08287	484 aa	Predicted RBP	5.84	□□□□□ -1.47
SLX8	YER116C	ARH1	P48360	493 aa		5.82	□□□□□ -1.48
SLX8	YER116C	KIN1	P13185	1064 aa		5.81	□□□□□ -1.48
SLX8	YER116C	SLX8	P40072	274 aa		5.81	□□□□□ -1.48
SLX8	YER116C	ELP4	Q02884	456 aa	Known RBP	5.81	□□□□□ -1.48
SLX8	YER116C	SOL3	P38858	249 aa		5.8	□□□□□ -1.48
SLX8	YER116C	HGH1	P48362	394 aa	Known RBP	5.8	□□□□□ -1.48
SLX8	YER116C	XDJ1	P39102	459 aa		5.79	□□□□□ -1.48
SLX8	YER116C	VPS70	P47161	811 aa		5.79	□□□□□ -1.48
SLX8	YER116C	NOP7	P53261	605 aa	Known RBP	5.78	□□□□□ -1.48
SLX8	YER116C	YGR273C	P53329	174 aa		5.78	□□□□□ -1.48
SLX8	YER116C	PEX29	Q03370	554 aa		5.77	□□□□□ -1.49
SLX8	YER116C	SPT23	P35210	1082 aa		5.76	□□□□□ -1.49
SLX8	YER116C	VRP1	P37370	817 aa		5.76	□□□□□ -1.49
SLX8	YER116C	MID1	P41821	548 aa		5.75	□□□□□ -1.49
SLX8	YER116C	GEF1	P37020	779 aa		5.74	□□□□□ -1.49
SLX8	YER116C	HAP5	Q02516	242 aa		5.74	□□□□□ -1.49
SLX8	YER116C	TOP1	P04786	769 aa		5.73	□□□□□ -1.49
SLX8	YER116C	SSA1	P10591	642 aa	Known RBP	5.73	□□□□□ -1.49
SLX8	YER116C	ILV3	P39522	585 aa	Known RBP	5.73	□□□□□ -1.49
SLX8	YER116C	BNI4	P53858	892 aa		5.73	□□□□□ -1.49
SLX8	YER116C	SET1	P38827	1080 aa	Known RBP	5.72	□□□□□ -1.49
SLX8	YER116C	YDR344C	Q05510	147 aa		5.72	□□□□□ -1.49
SLX8	YER116C	YRB30	P53107	440 aa	Predicted RBP	5.71	□□□□□ -1.5
SLX8	YER116C	YNR021W	P53723	404 aa	Known RBP	5.71	□□□□□ -1.5
SLX8	YER116C	YPR148C	Q06523	435 aa		5.71	□□□□□ -1.5
SLX8	YER116C	YML082W	Q04533	649 aa	Known RBP	5.7	□□□□□ -1.5
SLX8	YER116C	GLC3	P32775	704 aa		5.69	□□□□□ -1.5
SLX8	YER116C	BRL1	P38770	471 aa		5.69	□□□□□ -1.5
SLX8	YER116C	PTC2	P39966	464 aa	Known RBP	5.69	□□□□□ -1.5
SLX8	YER116C	SNU71	P53207	620 aa	Known RBP	5.69	□□□□□ -1.5
SLX8	YER116C	MPC54	Q08550	464 aa		5.69	□□□□□ -1.5
SLX8	YER116C	DSF2	P38213	736 aa		5.68	□□□□□ -1.5
SLX8	YER116C	SUB2	Q07478	446 aa	Known RBP	5.68	□□□□□ -1.5
SLX8	YER116C	SLI15	P38283	698 aa		5.67	□□□□□ -1.5
SLX8	YER116C	GUA1	P38625	525 aa	Known RBP	5.67	□□□□□ -1.5
SLX8	YER116C	DPL1	Q05567	589 aa		5.67	□□□□□ -1.5
SLX8	YER116C	PBS2	P08018	668 aa		5.66	□□□□□ -1.5
SLX8	YER116C	MRX12	P47084	519 aa		5.66	□□□□□ -1.5
SLX8	YER116C	MAM3	Q12296	706 aa		5.66	□□□□□ -1.5
SLX8	YER116C	KEX1	P09620	729 aa		5.65	□□□□□ -1.5
SLX8	YER116C	NMA111	P53920	997 aa		5.65	□□□□□ -1.5
SLX8	YER116C	MET10	P39692	1035 aa		5.64	□□□□□ -1.51
SLX8	YER116C	DPS1	P04802	557 aa	Known RBP	5.63	□□□□□ -1.51
SLX8	YER116C	RPP1B	P10622	106 aa	Known RBP	5.63	□□□□□ -1.51
SLX8	YER116C	AIM7	Q12156	149 aa		5.63	□□□□□ -1.51
SLX8	YER116C	ISU2	Q12056	156 aa		5.62	□□□□□ -1.51
SLX8	YER116C	SLD2	P34252	453 aa		5.61	□□□□□ -1.51
SLX8	YER116C	BRN1	P38170	754 aa		5.61	□□□□□ -1.51
SLX8	YER116C	YLR326W	Q06170	240 aa	Known RBP	5.6	□□□□□ -1.51
SLX8	YER116C	PAM1	P37304	830 aa	Known RBP	5.59	□□□□□ -1.51
SLX8	YER116C	UBP14	P38237	781 aa	Known RBP	5.59	□□□□□ -1.51
SLX8	YER116C	TFB3	Q03290	321 aa		5.59	□□□□□ -1.51
SLX8	YER116C	RAD54	P32863	898 aa		5.57	□□□□□ -1.52
SLX8	YER116C	IES2	P40154	320 aa		5.57	□□□□□ -1.52
SLX8	YER116C	HPC2	Q01448	625 aa		5.57	□□□□□ -1.52
SLX8	YER116C	YTA7	P40340	1379 aa		5.56	□□□□□ -1.52
SLX8	YER116C	DIT2	P21595	489 aa		5.56	□□□□□ -1.52
SLX8	YER116C	RRN6	P32786	894 aa		5.56	□□□□□ -1.52
SLX8	YER116C	VHR2	P40041	505 aa		5.56	□□□□□ -1.52
SLX8	YER116C	RAM1	P22007	431 aa		5.55	□□□□□ -1.52
SLX8	YER116C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.55	□□□□□ -1.52	not detected
SLX8	YER116C	NUG1	P40010	520 aa	Known RBP	5.55	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms