RNA–Protein interactions for RNA: YEL047C

FRD1, Transcript of Soluble fumarate reductase, yeastyeast

Gene FRD1, Length 1,413 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FRD1YEL047C YRF1-5P0CX21 1796 aa18.07■□□□□ 0.48
FRD1YEL047C YRF1-8P0CX22 1796 aa18.07■□□□□ 0.48
FRD1YEL047C SNQ2P32568 1501 aaKnown RBP18.04■□□□□ 0.48
FRD1YEL047C LTE1P07866 1435 aa17.97■□□□□ 0.47
FRD1YEL047C SNT2P53127 1403 aa17.95■□□□□ 0.46
FRD1YEL047C SAS10Q12136 610 aaPredicted RBP17.95■□□□□ 0.46
FRD1YEL047C STH1P32597 1359 aa17.93■□□□□ 0.46
FRD1YEL047C MLP2P40457 1679 aa17.93■□□□□ 0.46
FRD1YEL047C VPS15P22219 1454 aa17.9■□□□□ 0.46
FRD1YEL047C ULS1Q08562 1619 aa17.89■□□□□ 0.46
FRD1YEL047C PDR15Q04182 1529 aaKnown RBP17.86■□□□□ 0.45
FRD1YEL047C GEA2P39993 1459 aaKnown RBP17.85■□□□□ 0.45
FRD1YEL047C BNI1P41832 1953 aa17.79■□□□□ 0.44
FRD1YEL047C RTT106P40161 455 aa17.74■□□□□ 0.43
FRD1YEL047C SPO14P36126 1683 aa17.74■□□□□ 0.43
FRD1YEL047C ITT1Q04638 464 aa17.7■□□□□ 0.42
FRD1YEL047C MET10P39692 1035 aa17.69■□□□□ 0.42
FRD1YEL047C IRC20Q06554 1556 aa17.67■□□□□ 0.42
FRD1YEL047C TAF7Q05021 590 aa17.67■□□□□ 0.42
FRD1YEL047C PDR12Q02785 1511 aa17.66■□□□□ 0.42
FRD1YEL047C IFH1P39520 1085 aa17.64■□□□□ 0.42
FRD1YEL047C DRS2P39524 1355 aa17.62■□□□□ 0.41
FRD1YEL047C GDB1Q06625 1536 aa17.61■□□□□ 0.41
FRD1YEL047C NUP170P38181 1502 aa17.59■□□□□ 0.41
FRD1YEL047C GEA1P47102 1408 aaPredicted RBP17.57■□□□□ 0.4
FRD1YEL047C NUP157P40064 1391 aaKnown RBP17.54■□□□□ 0.4
FRD1YEL047C TY3B-GQ99315 1547 aa17.52■□□□□ 0.4
FRD1YEL047C MMS1Q06211 1407 aa17.5■□□□□ 0.39
FRD1YEL047C PDR10P51533 1564 aa17.49■□□□□ 0.39
FRD1YEL047C YBT1P32386 1661 aa17.47■□□□□ 0.39
FRD1YEL047C IQG1Q12280 1495 aa17.46■□□□□ 0.39
FRD1YEL047C CAT8P39113 1433 aa17.39■□□□□ 0.37
FRD1YEL047C DOP1Q03921 1698 aa17.38■□□□□ 0.37
FRD1YEL047C BUD3P25558 1636 aa17.33■□□□□ 0.36
FRD1YEL047C ARO1P08566 1588 aaKnown RBP17.32■□□□□ 0.36
FRD1YEL047C TRM3Q07527 1436 aa17.29■□□□□ 0.36
FRD1YEL047C DNF2Q12675 1612 aa17.29■□□□□ 0.36
FRD1YEL047C CKB1P43639 278 aa17.22■□□□□ 0.35
FRD1YEL047C ABP1P15891 592 aaKnown RBP17.21■□□□□ 0.34
FRD1YEL047C CHC1P22137 1653 aaKnown RBP17.2■□□□□ 0.34
FRD1YEL047C YSP2Q06681 1438 aa17.19■□□□□ 0.34
FRD1YEL047C SEC7P11075 2009 aaKnown RBP17.15■□□□□ 0.34
FRD1YEL047C SRB8P25648 1427 aa17.07■□□□□ 0.32
FRD1YEL047C MIF2P35201 549 aa17.06■□□□□ 0.32
FRD1YEL047C BNR1P40450 1375 aa17.06■□□□□ 0.32
FRD1YEL047C IKI3Q06706 1349 aaKnown RBP17.05■□□□□ 0.32
FRD1YEL047C YOR093CQ12275 1648 aa16.98■□□□□ 0.31
FRD1YEL047C SSM4P40318 1319 aa16.94■□□□□ 0.3
FRD1YEL047C BUD21Q08492 214 aaPredicted RBP16.87■□□□□ 0.29
FRD1YEL047C DNF3Q12674 1656 aa16.81■□□□□ 0.28
FRD1YEL047C YAP3P38749 330 aa16.76■□□□□ 0.27
FRD1YEL047C NUP188P52593 1655 aaKnown RBP16.72■□□□□ 0.27
FRD1YEL047C VMR1P38735 1592 aa16.72■□□□□ 0.27
FRD1YEL047C URN1Q06525 465 aaKnown RBP16.64■□□□□ 0.25
FRD1YEL047C GCN2P15442 1659 aa16.63■□□□□ 0.25
FRD1YEL047C IPL1P38991 367 aa16.59■□□□□ 0.25
FRD1YEL047C YFR006WP43590 535 aa16.59■□□□□ 0.25
FRD1YEL047C IML1P47170 1584 aa16.59■□□□□ 0.25
FRD1YEL047C TYS1P36421 394 aaKnown RBP16.58■□□□□ 0.24
FRD1YEL047C PDR5P33302 1511 aaKnown RBP16.57■□□□□ 0.24
FRD1YEL047C MAK10Q02197 733 aa16.52■□□□□ 0.23
FRD1YEL047C PDR11P40550 1411 aa16.51■□□□□ 0.23
FRD1YEL047C HAP1P0CE41 1502 aa16.44■□□□□ 0.22
FRD1YEL047C USO1P25386 1790 aa16.44■□□□□ 0.22
FRD1YEL047C RAV1P47104 1357 aa16.29■□□□□ 0.2
FRD1YEL047C PAF1P38351 445 aa16.28■□□□□ 0.2
FRD1YEL047C TY1B-NL2Q99337 1749 aaKnown RBP16.24■□□□□ 0.19
FRD1YEL047C BFR2Q06631 534 aaKnown RBP16.23■□□□□ 0.19
FRD1YEL047C NOP7P53261 605 aaKnown RBP16.2■□□□□ 0.18
FRD1YEL047C NUP192P47054 1683 aa16.2■□□□□ 0.18
FRD1YEL047C RTC1Q08281 1341 aa16.18■□□□□ 0.18
FRD1YEL047C KRE5P22023 1365 aa16.17■□□□□ 0.18
FRD1YEL047C BCK1Q01389 1478 aa16.13■□□□□ 0.17
FRD1YEL047C THI12P42883 340 aa16.12■□□□□ 0.17
FRD1YEL047C THI5P43534 340 aa16.12■□□□□ 0.17
FRD1YEL047C THI11P47183 340 aa16.12■□□□□ 0.17
FRD1YEL047C THI13Q07748 340 aa16.12■□□□□ 0.17
FRD1YEL047C YMR196WQ04336 1088 aa16.11■□□□□ 0.17
FRD1YEL047C RAD9P14737 1309 aa16.09■□□□□ 0.17
FRD1YEL047C RIA1P53893 1110 aa16.09■□□□□ 0.17
FRD1YEL047C CFT1Q06632 1357 aaKnown RBP16.08■□□□□ 0.16
FRD1YEL047C MRX12P47084 519 aa16.08■□□□□ 0.16
FRD1YEL047C CAB1Q04430 367 aa16.06■□□□□ 0.16
FRD1YEL047C ALD4P46367 519 aaKnown RBP16.03■□□□□ 0.16
FRD1YEL047C TAF5P38129 798 aa15.99■□□□□ 0.15
FRD1YEL047C YNR029CP53729 429 aaKnown RBP15.97■□□□□ 0.15
FRD1YEL047C ESL2P36168 1195 aa15.93■□□□□ 0.14
FRD1YEL047C TAF8Q03750 510 aa15.88■□□□□ 0.13
FRD1YEL047C TY3B-IQ7LHG5 1498 aaKnown RBP15.86■□□□□ 0.13
FRD1YEL047C ORC1P54784 914 aaPredicted RBP15.79■□□□□ 0.12
FRD1YEL047C NAP1P25293 417 aaKnown RBP15.78■□□□□ 0.12
FRD1YEL047C KIP3P53086 805 aaKnown RBP15.78■□□□□ 0.12
FRD1YEL047C RCM1P53972 490 aa15.75■□□□□ 0.11
FRD1YEL047C SPE2P21182 396 aa15.74■□□□□ 0.11
FRD1YEL047C PTP3P40048 928 aa15.71■□□□□ 0.11
FRD1YEL047C YLR419WQ06698 1435 aaKnown RBP15.71■□□□□ 0.1
FRD1YEL047C PPH3P32345 308 aa15.69■□□□□ 0.1
FRD1YEL047C CPS1P27614 576 aa15.68■□□□□ 0.1
FRD1YEL047C APP1P53933 587 aa15.6■□□□□ 0.09
FRD1YEL047C TY4B-HP0C2J7 1802 aa15.6■□□□□ 0.09
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms