RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeastyeast

Gene VMA3, Length 483 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA3YEL027W YRF1-5P0CX21 1796 aa10.37□□□□□ -0.75
VMA3YEL027W YRF1-8P0CX22 1796 aa10.37□□□□□ -0.75
VMA3YEL027W ITT1Q04638 464 aa10.35□□□□□ -0.75
VMA3YEL027W VPS15P22219 1454 aa10.34□□□□□ -0.75
VMA3YEL027W YTA7P40340 1379 aa10.33□□□□□ -0.76
VMA3YEL027W MYO4P32492 1471 aa10.33□□□□□ -0.76
VMA3YEL027W RPO21P04050 1733 aaKnown RBP10.32□□□□□ -0.76
VMA3YEL027W MIF2P35201 549 aa10.31□□□□□ -0.76
VMA3YEL027W DRS2P39524 1355 aa10.28□□□□□ -0.76
VMA3YEL027W MMS1Q06211 1407 aa10.25□□□□□ -0.77
VMA3YEL027W SNQ2P32568 1501 aaKnown RBP10.25□□□□□ -0.77
VMA3YEL027W STH1P32597 1359 aa10.23□□□□□ -0.77
VMA3YEL027W SNT2P53127 1403 aa10.23□□□□□ -0.77
VMA3YEL027W ABP1P15891 592 aaKnown RBP10.19□□□□□ -0.78
VMA3YEL027W MET10P39692 1035 aa10.17□□□□□ -0.78
VMA3YEL027W NUP170P38181 1502 aa10.15□□□□□ -0.78
VMA3YEL027W RTT106P40161 455 aa10.13□□□□□ -0.79
VMA3YEL027W ULS1Q08562 1619 aa10.12□□□□□ -0.79
VMA3YEL027W SPO14P36126 1683 aa10.12□□□□□ -0.79
VMA3YEL027W PDR12Q02785 1511 aa10.11□□□□□ -0.79
VMA3YEL027W MLP2P40457 1679 aa10.1□□□□□ -0.79
VMA3YEL027W IRC20Q06554 1556 aa10.08□□□□□ -0.8
VMA3YEL027W DNF2Q12675 1612 aa10.07□□□□□ -0.8
VMA3YEL027W GDB1Q06625 1536 aa10.04□□□□□ -0.8
VMA3YEL027W PDR15Q04182 1529 aaKnown RBP10.03□□□□□ -0.8
VMA3YEL027W SAS10Q12136 610 aaPredicted RBP10.03□□□□□ -0.8
VMA3YEL027W NUP157P40064 1391 aaKnown RBP10.02□□□□□ -0.8
VMA3YEL027W IQG1Q12280 1495 aa10.02□□□□□ -0.81
VMA3YEL027W DOP1Q03921 1698 aa9.99□□□□□ -0.81
VMA3YEL027W TRM3Q07527 1436 aa9.99□□□□□ -0.81
VMA3YEL027W TAF7Q05021 590 aa9.99□□□□□ -0.81
VMA3YEL027W PDR10P51533 1564 aa9.98□□□□□ -0.81
VMA3YEL027W BUD3P25558 1636 aa9.97□□□□□ -0.81
VMA3YEL027W YFR006WP43590 535 aa9.96□□□□□ -0.82
VMA3YEL027W IFH1P39520 1085 aa9.91□□□□□ -0.82
VMA3YEL027W CAT8P39113 1433 aa9.87□□□□□ -0.83
VMA3YEL027W ARO1P08566 1588 aaKnown RBP9.85□□□□□ -0.83
VMA3YEL027W GEA1P47102 1408 aaPredicted RBP9.85□□□□□ -0.83
VMA3YEL027W CHC1P22137 1653 aaKnown RBP9.85□□□□□ -0.83
VMA3YEL027W YOR093CQ12275 1648 aa9.83□□□□□ -0.84
VMA3YEL027W TY3B-GQ99315 1547 aa9.81□□□□□ -0.84
VMA3YEL027W YBT1P32386 1661 aa9.8□□□□□ -0.84
VMA3YEL027W SEC7P11075 2009 aaKnown RBP9.78□□□□□ -0.84
VMA3YEL027W CKB1P43639 278 aa9.76□□□□□ -0.85
VMA3YEL027W YSP2Q06681 1438 aa9.75□□□□□ -0.85
VMA3YEL027W BNR1P40450 1375 aa9.73□□□□□ -0.85
VMA3YEL027W DNF3Q12674 1656 aa9.71□□□□□ -0.85
VMA3YEL027W YAP3P38749 330 aa9.69□□□□□ -0.86
VMA3YEL027W SRB8P25648 1427 aa9.63□□□□□ -0.87
VMA3YEL027W URN1Q06525 465 aaKnown RBP9.62□□□□□ -0.87
VMA3YEL027W MAK10Q02197 733 aa9.59□□□□□ -0.87
VMA3YEL027W BUD21Q08492 214 aaPredicted RBP9.53□□□□□ -0.88
VMA3YEL027W IKI3Q06706 1349 aaKnown RBP9.53□□□□□ -0.88
VMA3YEL027W IPL1P38991 367 aa9.5□□□□□ -0.89
VMA3YEL027W NUP188P52593 1655 aaKnown RBP9.49□□□□□ -0.89
VMA3YEL027W HAP1P0CE41 1502 aa9.47□□□□□ -0.89
VMA3YEL027W USO1P25386 1790 aa9.47□□□□□ -0.89
VMA3YEL027W IML1P47170 1584 aa9.46□□□□□ -0.9
VMA3YEL027W VMR1P38735 1592 aa9.43□□□□□ -0.9
VMA3YEL027W TYS1P36421 394 aaKnown RBP9.43□□□□□ -0.9
VMA3YEL027W YMR196WQ04336 1088 aa9.4□□□□□ -0.9
VMA3YEL027W TY1B-NL2Q99337 1749 aaKnown RBP9.39□□□□□ -0.91
VMA3YEL027W SSM4P40318 1319 aa9.38□□□□□ -0.91
VMA3YEL027W PDR5P33302 1511 aaKnown RBP9.37□□□□□ -0.91
VMA3YEL027W THI12P42883 340 aa9.35□□□□□ -0.91
VMA3YEL027W THI5P43534 340 aa9.35□□□□□ -0.91
VMA3YEL027W THI11P47183 340 aa9.35□□□□□ -0.91
VMA3YEL027W THI13Q07748 340 aa9.35□□□□□ -0.91
VMA3YEL027W GCN2P15442 1659 aa9.28□□□□□ -0.92
VMA3YEL027W PDR11P40550 1411 aa9.26□□□□□ -0.93
VMA3YEL027W KRE5P22023 1365 aa9.21□□□□□ -0.94
VMA3YEL027W MRX12P47084 519 aa9.19□□□□□ -0.94
VMA3YEL027W CFT1Q06632 1357 aaKnown RBP9.19□□□□□ -0.94
VMA3YEL027W RIA1P53893 1110 aa9.18□□□□□ -0.94
VMA3YEL027W PAF1P38351 445 aa9.17□□□□□ -0.94
VMA3YEL027W RAV1P47104 1357 aa9.16□□□□□ -0.94
VMA3YEL027W BCK1Q01389 1478 aa9.15□□□□□ -0.94
VMA3YEL027W YNR029CP53729 429 aaKnown RBP9.14□□□□□ -0.95
VMA3YEL027W YAH1Q12184 172 aaKnown RBP9.14□□□□□ -0.95
VMA3YEL027W PTP3P40048 928 aa9.1□□□□□ -0.95
VMA3YEL027W CAB1Q04430 367 aa9.1□□□□□ -0.95
VMA3YEL027W BFR2Q06631 534 aaKnown RBP9.1□□□□□ -0.95
VMA3YEL027W NUP192P47054 1683 aa9.1□□□□□ -0.95
VMA3YEL027W RTC1Q08281 1341 aa9.09□□□□□ -0.95
VMA3YEL027W RAD9P14737 1309 aa9.08□□□□□ -0.96
VMA3YEL027W ALD4P46367 519 aaKnown RBP9.08□□□□□ -0.96
VMA3YEL027W NOP7P53261 605 aaKnown RBP9.06□□□□□ -0.96
VMA3YEL027W APP1P53933 587 aa9.06□□□□□ -0.96
VMA3YEL027W GLN1P32288 370 aaKnown RBP9.02□□□□□ -0.97
VMA3YEL027W YIL055CP40523 627 aaKnown RBP9.02□□□□□ -0.97
VMA3YEL027W TY3B-IQ7LHG5 1498 aaKnown RBP9.02□□□□□ -0.97
VMA3YEL027W REB1P21538 810 aa8.99□□□□□ -0.97
VMA3YEL027W NAP1P25293 417 aaKnown RBP8.98□□□□□ -0.97
VMA3YEL027W ENT1Q12518 454 aa8.96□□□□□ -0.98
VMA3YEL027W ESL2P36168 1195 aa8.95□□□□□ -0.98
VMA3YEL027W TAF8Q03750 510 aa8.94□□□□□ -0.98
VMA3YEL027W ENV9Q08651 330 aa8.93□□□□□ -0.98
VMA3YEL027W TAF5P38129 798 aa8.92□□□□□ -0.98
VMA3YEL027W CPS1P27614 576 aa8.91□□□□□ -0.98
VMA3YEL027W YMR074CQ04773 145 aa8.9□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 6.3 ms