RNA–Protein interactions for RNA: YDR487C

RIB3, Transcript of 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), yeastyeast

Gene RIB3, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIB3YDR487C TY1B-NL1Q12112 1755 aa15.16■□□□□ 0.02
RIB3YDR487C TY1B-GR1Q12141 1755 aa15.16■□□□□ 0.02
RIB3YDR487C TY1B-BLQ12490 1755 aa15.16■□□□□ 0.02
RIB3YDR487C DRS2P39524 1355 aa15.15■□□□□ 0.02
RIB3YDR487C STH1P32597 1359 aa15.14■□□□□ 0.01
RIB3YDR487C YRF1-1P0CX20 1796 aa15.13■□□□□ 0.01
RIB3YDR487C YRF1-5P0CX21 1796 aa15.13■□□□□ 0.01
RIB3YDR487C YRF1-8P0CX22 1796 aa15.13■□□□□ 0.01
RIB3YDR487C NTE1Q04958 1679 aa15.12■□□□□ 0.01
RIB3YDR487C RTT106P40161 455 aa15.1■□□□□ 0.01
RIB3YDR487C MMS1Q06211 1407 aa15.09■□□□□ 0.01
RIB3YDR487C ABP1P15891 592 aaKnown RBP15.09■□□□□ 0.01
RIB3YDR487C MET10P39692 1035 aa15.09■□□□□ 0.01
RIB3YDR487C SNT2P53127 1403 aa15.07■□□□□ 0
RIB3YDR487C SNQ2P32568 1501 aaKnown RBP15.07■□□□□ 0
RIB3YDR487C RPO21P04050 1733 aaKnown RBP15.06■□□□□ 0
RIB3YDR487C SAS10Q12136 610 aaPredicted RBP15.01□□□□□ -0.01
RIB3YDR487C NUP170P38181 1502 aa14.9□□□□□ -0.02
RIB3YDR487C TAF7Q05021 590 aa14.88□□□□□ -0.03
RIB3YDR487C ULS1Q08562 1619 aa14.83□□□□□ -0.04
RIB3YDR487C NUP157P40064 1391 aaKnown RBP14.83□□□□□ -0.04
RIB3YDR487C PDR12Q02785 1511 aa14.82□□□□□ -0.04
RIB3YDR487C SPO14P36126 1683 aa14.82□□□□□ -0.04
RIB3YDR487C IFH1P39520 1085 aa14.82□□□□□ -0.04
RIB3YDR487C PDR15Q04182 1529 aaKnown RBP14.78□□□□□ -0.04
RIB3YDR487C IQG1Q12280 1495 aa14.76□□□□□ -0.05
RIB3YDR487C MLP2P40457 1679 aa14.74□□□□□ -0.05
RIB3YDR487C GDB1Q06625 1536 aa14.72□□□□□ -0.05
RIB3YDR487C YFR006WP43590 535 aa14.69□□□□□ -0.06
RIB3YDR487C PDR10P51533 1564 aa14.68□□□□□ -0.06
RIB3YDR487C DNF2Q12675 1612 aa14.68□□□□□ -0.06
RIB3YDR487C TRM3Q07527 1436 aa14.67□□□□□ -0.06
RIB3YDR487C IRC20Q06554 1556 aa14.67□□□□□ -0.06
RIB3YDR487C BUD3P25558 1636 aa14.63□□□□□ -0.07
RIB3YDR487C GEA1P47102 1408 aaPredicted RBP14.59□□□□□ -0.07
RIB3YDR487C DOP1Q03921 1698 aa14.58□□□□□ -0.07
RIB3YDR487C CKB1P43639 278 aa14.56□□□□□ -0.08
RIB3YDR487C CAT8P39113 1433 aa14.56□□□□□ -0.08
RIB3YDR487C ARO1P08566 1588 aaKnown RBP14.44□□□□□ -0.1
RIB3YDR487C TY3B-GQ99315 1547 aa14.42□□□□□ -0.1
RIB3YDR487C YSP2Q06681 1438 aa14.41□□□□□ -0.1
RIB3YDR487C BNR1P40450 1375 aa14.41□□□□□ -0.1
RIB3YDR487C YAP3P38749 330 aa14.38□□□□□ -0.11
RIB3YDR487C CHC1P22137 1653 aaKnown RBP14.36□□□□□ -0.11
RIB3YDR487C SEC7P11075 2009 aaKnown RBP14.35□□□□□ -0.11
RIB3YDR487C YBT1P32386 1661 aa14.34□□□□□ -0.11
RIB3YDR487C YOR093CQ12275 1648 aa14.33□□□□□ -0.11
RIB3YDR487C URN1Q06525 465 aaKnown RBP14.3□□□□□ -0.12
RIB3YDR487C SRB8P25648 1427 aa14.26□□□□□ -0.13
RIB3YDR487C BUD21Q08492 214 aaPredicted RBP14.23□□□□□ -0.13
RIB3YDR487C MAK10Q02197 733 aa14.2□□□□□ -0.14
RIB3YDR487C DNF3Q12674 1656 aa14.19□□□□□ -0.14
RIB3YDR487C IPL1P38991 367 aa14.1□□□□□ -0.15
RIB3YDR487C IKI3Q06706 1349 aaKnown RBP14.04□□□□□ -0.16
RIB3YDR487C TYS1P36421 394 aaKnown RBP14.03□□□□□ -0.16
RIB3YDR487C YMR196WQ04336 1088 aa13.91□□□□□ -0.18
RIB3YDR487C NUP188P52593 1655 aaKnown RBP13.91□□□□□ -0.18
RIB3YDR487C SSM4P40318 1319 aa13.9□□□□□ -0.18
RIB3YDR487C THI12P42883 340 aa13.87□□□□□ -0.19
RIB3YDR487C THI5P43534 340 aa13.87□□□□□ -0.19
RIB3YDR487C THI11P47183 340 aa13.87□□□□□ -0.19
RIB3YDR487C THI13Q07748 340 aa13.87□□□□□ -0.19
RIB3YDR487C PDR5P33302 1511 aaKnown RBP13.86□□□□□ -0.19
RIB3YDR487C HAP1P0CE41 1502 aa13.85□□□□□ -0.19
RIB3YDR487C IML1P47170 1584 aa13.85□□□□□ -0.19
RIB3YDR487C VMR1P38735 1592 aa13.83□□□□□ -0.19
RIB3YDR487C USO1P25386 1790 aa13.8□□□□□ -0.2
RIB3YDR487C TY1B-NL2Q99337 1749 aaKnown RBP13.73□□□□□ -0.21
RIB3YDR487C PDR11P40550 1411 aa13.72□□□□□ -0.21
RIB3YDR487C MRX12P47084 519 aa13.71□□□□□ -0.21
RIB3YDR487C PAF1P38351 445 aa13.7□□□□□ -0.22
RIB3YDR487C RIA1P53893 1110 aa13.67□□□□□ -0.22
RIB3YDR487C KRE5P22023 1365 aa13.66□□□□□ -0.22
RIB3YDR487C GCN2P15442 1659 aa13.63□□□□□ -0.23
RIB3YDR487C BFR2Q06631 534 aaKnown RBP13.58□□□□□ -0.24
RIB3YDR487C RAV1P47104 1357 aa13.58□□□□□ -0.24
RIB3YDR487C CFT1Q06632 1357 aaKnown RBP13.58□□□□□ -0.24
RIB3YDR487C YNR029CP53729 429 aaKnown RBP13.57□□□□□ -0.24
RIB3YDR487C NOP7P53261 605 aaKnown RBP13.54□□□□□ -0.24
RIB3YDR487C CAB1Q04430 367 aa13.54□□□□□ -0.24
RIB3YDR487C ALD4P46367 519 aaKnown RBP13.52□□□□□ -0.25
RIB3YDR487C RTC1Q08281 1341 aa13.51□□□□□ -0.25
RIB3YDR487C BCK1Q01389 1478 aa13.5□□□□□ -0.25
RIB3YDR487C YAH1Q12184 172 aaKnown RBP13.5□□□□□ -0.25
RIB3YDR487C RAD9P14737 1309 aa13.49□□□□□ -0.25
RIB3YDR487C PTP3P40048 928 aa13.46□□□□□ -0.25
RIB3YDR487C APP1P53933 587 aa13.45□□□□□ -0.26
RIB3YDR487C NAP1P25293 417 aaKnown RBP13.4□□□□□ -0.26
RIB3YDR487C ESL2P36168 1195 aa13.35□□□□□ -0.27
RIB3YDR487C TAF5P38129 798 aa13.35□□□□□ -0.27
RIB3YDR487C YIL055CP40523 627 aaKnown RBP13.34□□□□□ -0.27
RIB3YDR487C TAF8Q03750 510 aa13.33□□□□□ -0.28
RIB3YDR487C TY3B-IQ7LHG5 1498 aaKnown RBP13.32□□□□□ -0.28
RIB3YDR487C GLN1P32288 370 aaKnown RBP13.32□□□□□ -0.28
RIB3YDR487C REB1P21538 810 aa13.31□□□□□ -0.28
RIB3YDR487C ENT1Q12518 454 aa13.31□□□□□ -0.28
RIB3YDR487C NUP192P47054 1683 aa13.31□□□□□ -0.28
RIB3YDR487C RCM1P53972 490 aa13.26□□□□□ -0.29
RIB3YDR487C CPS1P27614 576 aa13.25□□□□□ -0.29
RIB3YDR487C ENV9Q08651 330 aa13.25□□□□□ -0.29
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms