RNA–Protein interactions for RNA: YDR358W

GGA1, Transcript of Golgi-localized protein with homology to gamma-adaptin, yeastyeast

Gene GGA1, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA1YDR358W MSB4Q12317 492 aa7.44□□□□□ -1.22
GGA1YDR358W REF2P42073 533 aaPredicted RBP7.43□□□□□ -1.22
GGA1YDR358W DCW1P36091 449 aa7.42□□□□□ -1.22
GGA1YDR358W DSF2P38213 736 aa7.42□□□□□ -1.22
GGA1YDR358W YGR273CP53329 174 aa7.41□□□□□ -1.22
GGA1YDR358W PBS2P08018 668 aa7.41□□□□□ -1.22
GGA1YDR358W ABP1P15891 592 aaKnown RBP7.41□□□□□ -1.22
GGA1YDR358W UBP14P38237 781 aaKnown RBP7.41□□□□□ -1.22
GGA1YDR358W UBP9P39967 754 aa7.38□□□□□ -1.23
GGA1YDR358W YDR090CQ03193 310 aa7.38□□□□□ -1.23
GGA1YDR358W YLR326WQ06170 240 aaKnown RBP7.38□□□□□ -1.23
GGA1YDR358W SIS1P25294 352 aaKnown RBP7.38□□□□□ -1.23
GGA1YDR358W VHR2P40041 505 aa7.38□□□□□ -1.23
GGA1YDR358W HTA1P04911 132 aaKnown RBP7.37□□□□□ -1.23
GGA1YDR358W HTA2P04912 132 aa7.37□□□□□ -1.23
GGA1YDR358W ILV3P39522 585 aaKnown RBP7.37□□□□□ -1.23
GGA1YDR358W TIF11P38912 153 aaKnown RBP7.36□□□□□ -1.23
GGA1YDR358W TRP5P00931 707 aaKnown RBP7.35□□□□□ -1.23
GGA1YDR358W COX6P00427 148 aa7.34□□□□□ -1.23
GGA1YDR358W IOC2Q12072 812 aa7.34□□□□□ -1.23
GGA1YDR358W KEX1P09620 729 aa7.33□□□□□ -1.24
GGA1YDR358W EAP1P36041 632 aaKnown RBP7.33□□□□□ -1.24
GGA1YDR358W HGH1P48362 394 aaKnown RBP7.33□□□□□ -1.24
GGA1YDR358W SPP1Q03012 353 aa7.33□□□□□ -1.24
GGA1YDR358W ULI1P43604 169 aa7.32□□□□□ -1.24
GGA1YDR358W MAK21Q12176 1025 aaKnown RBP7.32□□□□□ -1.24
GGA1YDR358W MPH3P0CE00 602 aa7.32□□□□□ -1.24
GGA1YDR358W YEL023CP39992 682 aa7.32□□□□□ -1.24
GGA1YDR358W PCS60P38137 543 aaKnown RBP RIP-Chip data7.31□□□□□ -1.24not detected
GGA1YDR358W AI4P03878 556 aa7.3□□□□□ -1.24
GGA1YDR358W MAM3Q12296 706 aa7.3□□□□□ -1.24
GGA1YDR358W DAN4P47179 1161 aa7.29□□□□□ -1.24
GGA1YDR358W NUP42P49686 430 aaKnown RBP7.29□□□□□ -1.24
GGA1YDR358W IES2P40154 320 aa7.28□□□□□ -1.24
GGA1YDR358W YNR021WP53723 404 aaKnown RBP7.28□□□□□ -1.24
GGA1YDR358W KIN1P13185 1064 aa7.27□□□□□ -1.25
GGA1YDR358W PTC4P38089 393 aa7.27□□□□□ -1.25
GGA1YDR358W DIT2P21595 489 aa7.25□□□□□ -1.25
GGA1YDR358W RAD54P32863 898 aa7.25□□□□□ -1.25
GGA1YDR358W JIP4Q03361 876 aa7.25□□□□□ -1.25
GGA1YDR358W LDB19Q12502 818 aa7.23□□□□□ -1.25
GGA1YDR358W YNL035CP53962 389 aaKnown RBP7.22□□□□□ -1.25
GGA1YDR358W SLI15P38283 698 aa7.22□□□□□ -1.25
GGA1YDR358W ORC6P38826 435 aa7.21□□□□□ -1.26
GGA1YDR358W AIM7Q12156 149 aa7.21□□□□□ -1.26
GGA1YDR358W RTG1P32607 177 aa7.19□□□□□ -1.26
GGA1YDR358W KIC1P38692 1080 aa7.19□□□□□ -1.26
GGA1YDR358W GLC3P32775 704 aa7.18□□□□□ -1.26
GGA1YDR358W SEC61P32915 480 aa7.17□□□□□ -1.26
GGA1YDR358W FKH1P40466 484 aa7.17□□□□□ -1.26
GGA1YDR358W GAP1P19145 602 aaPredicted RBP7.16□□□□□ -1.26
GGA1YDR358W MID1P41821 548 aa7.16□□□□□ -1.26
GGA1YDR358W PML39Q03760 334 aa7.15□□□□□ -1.27
GGA1YDR358W CDC73Q06697 393 aa7.14□□□□□ -1.27
GGA1YDR358W PSE1P32337 1089 aaKnown RBP7.13□□□□□ -1.27
GGA1YDR358W AIR2Q12476 344 aaKnown RBP7.12□□□□□ -1.27
GGA1YDR358W NCR1Q12200 1170 aa7.11□□□□□ -1.27
GGA1YDR358W RGR1P19263 1082 aa7.1□□□□□ -1.27
GGA1YDR358W MPC54Q08550 464 aa7.1□□□□□ -1.27
GGA1YDR358W GUA1P38625 525 aaKnown RBP7.09□□□□□ -1.27
GGA1YDR358W MVP1P40959 511 aaKnown RBP7.09□□□□□ -1.27
GGA1YDR358W YDL129WQ07555 291 aa7.08□□□□□ -1.28
GGA1YDR358W YDR344CQ05510 147 aa7.07□□□□□ -1.28
GGA1YDR358W ATF2P53296 535 aa7.06□□□□□ -1.28
GGA1YDR358W HPC2Q01448 625 aa7.06□□□□□ -1.28
GGA1YDR358W DPL1Q05567 589 aa7.06□□□□□ -1.28
GGA1YDR358W CSC1Q06538 782 aa7.06□□□□□ -1.28
GGA1YDR358W PEX29Q03370 554 aa7.05□□□□□ -1.28
GGA1YDR358W AIM44Q99299 758 aa7.03□□□□□ -1.28
GGA1YDR358W TFB4Q12004 338 aa7.03□□□□□ -1.28
GGA1YDR358W TFG1P41895 735 aaPredicted RBP7.02□□□□□ -1.29
GGA1YDR358W RPP1BP10622 106 aaKnown RBP7.01□□□□□ -1.29
GGA1YDR358W SAP30P38429 201 aa7.01□□□□□ -1.29
GGA1YDR358W NMA111P53920 997 aa7.01□□□□□ -1.29
GGA1YDR358W YPR109WQ06104 294 aa7□□□□□ -1.29
GGA1YDR358W YML020WQ03722 664 aa7□□□□□ -1.29
GGA1YDR358W ISU2Q12056 156 aa7□□□□□ -1.29
GGA1YDR358W TEA1P47988 759 aa6.99□□□□□ -1.29
GGA1YDR358W SSA1P10591 642 aaKnown RBP6.98□□□□□ -1.29
GGA1YDR358W BRL1P38770 471 aa6.98□□□□□ -1.29
GGA1YDR358W ARH1P48360 493 aa6.98□□□□□ -1.29
GGA1YDR358W TFB3Q03290 321 aa6.98□□□□□ -1.29
GGA1YDR358W TUM1Q08686 304 aaKnown RBP6.98□□□□□ -1.29
GGA1YDR358W CLB5P30283 435 aa6.97□□□□□ -1.29
GGA1YDR358W GEF1P37020 779 aa6.96□□□□□ -1.3
GGA1YDR358W SLX8P40072 274 aa6.96□□□□□ -1.3
GGA1YDR358W NIS1P53939 407 aa6.96□□□□□ -1.3
GGA1YDR358W YRR1Q12172 810 aa6.96□□□□□ -1.3
GGA1YDR358W KTR1P27810 393 aaKnown RBP6.95□□□□□ -1.3
GGA1YDR358W PEX21P50091 288 aa6.95□□□□□ -1.3
GGA1YDR358W HAP5Q02516 242 aa6.95□□□□□ -1.3
GGA1YDR358W NOP8Q08287 484 aaPredicted RBP6.95□□□□□ -1.3
GGA1YDR358W SSA2P10592 639 aaKnown RBP6.93□□□□□ -1.3
GGA1YDR358W PDR1P12383 1068 aa6.93□□□□□ -1.3
GGA1YDR358W BMT6Q12291 365 aa6.93□□□□□ -1.3
GGA1YDR358W SIT4P20604 311 aa6.92□□□□□ -1.3
GGA1YDR358W FPK1P53739 893 aa6.92□□□□□ -1.3
GGA1YDR358W SUB2Q07478 446 aaKnown RBP6.92□□□□□ -1.3
GGA1YDR358W RAM1P22007 431 aa6.91□□□□□ -1.3
GGA1YDR358W BNI4P53858 892 aa6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms