RNA–Protein interactions for RNA: YDR356W

SPC110, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC110, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC110YDR356W DAN4P47179 1161 aa2.2□□□□□ -2.06
SPC110YDR356W BRE2P43132 505 aa2.2□□□□□ -2.06
SPC110YDR356W SPT23P35210 1082 aa2.19□□□□□ -2.06
SPC110YDR356W NRD1P53617 575 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
SPC110YDR356W YRB30P53107 440 aaPredicted RBP2.18□□□□□ -2.06
SPC110YDR356W RAS1P01119 309 aa2.17□□□□□ -2.06
SPC110YDR356W ABP1P15891 592 aaKnown RBP2.16□□□□□ -2.06
SPC110YDR356W URN1Q06525 465 aaKnown RBP2.16□□□□□ -2.06
SPC110YDR356W SWR1Q05471 1514 aa2.13□□□□□ -2.07
SPC110YDR356W MNN4P36044 1178 aa2.13□□□□□ -2.07
SPC110YDR356W HTA1P04911 132 aaKnown RBP2.12□□□□□ -2.07
SPC110YDR356W HTA2P04912 132 aa2.12□□□□□ -2.07
SPC110YDR356W LEO1P38439 464 aa2.12□□□□□ -2.07
SPC110YDR356W PTC2P39966 464 aaKnown RBP2.11□□□□□ -2.07
SPC110YDR356W YEL077CQ3E7X8 1277 aa2.11□□□□□ -2.07
SPC110YDR356W AMS1P22855 1083 aa2.09□□□□□ -2.07
SPC110YDR356W SAS10Q12136 610 aaPredicted RBP2.09□□□□□ -2.07
SPC110YDR356W DMA1P38823 416 aa2.09□□□□□ -2.08
SPC110YDR356W GYP5Q12344 894 aa2.09□□□□□ -2.08
SPC110YDR356W DCW1P36091 449 aa2.08□□□□□ -2.08
SPC110YDR356W DNF1P32660 1571 aa2.07□□□□□ -2.08
SPC110YDR356W PTC4P38089 393 aa2.06□□□□□ -2.08
SPC110YDR356W RSM7P47150 247 aa2.06□□□□□ -2.08
SPC110YDR356W GYP1Q08484 637 aa2.06□□□□□ -2.08
SPC110YDR356W ARH1P48360 493 aa2.06□□□□□ -2.08
SPC110YDR356W PUS1Q12211 544 aaKnown RBP2.06□□□□□ -2.08
SPC110YDR356W AI2P03876 854 aa2.05□□□□□ -2.08
SPC110YDR356W YAH1Q12184 172 aaKnown RBP2.05□□□□□ -2.08
SPC110YDR356W PML39Q03760 334 aa2.05□□□□□ -2.08
SPC110YDR356W IRC20Q06554 1556 aa2.05□□□□□ -2.08
SPC110YDR356W NAP1P25293 417 aaKnown RBP2.04□□□□□ -2.08
SPC110YDR356W CAB3P36076 571 aa2.04□□□□□ -2.08
SPC110YDR356W RRD1P40454 393 aaKnown RBP2.04□□□□□ -2.08
SPC110YDR356W LSB3P43603 459 aaKnown RBP2.04□□□□□ -2.08
SPC110YDR356W HGH1P48362 394 aaKnown RBP2.04□□□□□ -2.08
SPC110YDR356W SUB1P54000 292 aaKnown RBP2.04□□□□□ -2.08
SPC110YDR356W MDS3P53094 1487 aa2.03□□□□□ -2.08
SPC110YDR356W PLP2Q12017 286 aa2.02□□□□□ -2.09
SPC110YDR356W FPR3P38911 411 aaKnown RBP2.02□□□□□ -2.09
SPC110YDR356W RPS0BP46654 252 aaKnown RBP2.02□□□□□ -2.09
SPC110YDR356W NOP7P53261 605 aaKnown RBP2.01□□□□□ -2.09
SPC110YDR356W SIS2P36024 562 aa2.01□□□□□ -2.09
SPC110YDR356W REV3P14284 1504 aa2□□□□□ -2.09
SPC110YDR356W TOP1P04786 769 aa2□□□□□ -2.09
SPC110YDR356W SBP1P10080 294 aaKnown RBP2□□□□□ -2.09
SPC110YDR356W RIM101P33400 625 aa2□□□□□ -2.09
SPC110YDR356W YMR1P47147 688 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
SPC110YDR356W BNI1P41832 1953 aa2□□□□□ -2.09
SPC110YDR356W EBP2P36049 427 aaKnown RBP1.99□□□□□ -2.09
SPC110YDR356W YEL023CP39992 682 aa1.99□□□□□ -2.09
SPC110YDR356W VPS72Q03388 795 aa1.99□□□□□ -2.09
SPC110YDR356W RLF2Q12495 606 aa1.99□□□□□ -2.09
SPC110YDR356W DBP1P24784 617 aaKnown RBP1.99□□□□□ -2.09
SPC110YDR356W BRL1P38770 471 aa1.99□□□□□ -2.09
SPC110YDR356W MRF1P30775 413 aaPredicted RBP1.99□□□□□ -2.09
SPC110YDR356W ARP8Q12386 881 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
SPC110YDR356W RPP1BP10622 106 aaKnown RBP1.97□□□□□ -2.09
SPC110YDR356W HSP82P02829 709 aaKnown RBP1.97□□□□□ -2.09
SPC110YDR356W MRM1P25270 412 aa1.97□□□□□ -2.09
SPC110YDR356W RIX1P38883 763 aaPredicted RBP1.97□□□□□ -2.09
SPC110YDR356W ENV9Q08651 330 aa1.97□□□□□ -2.09
SPC110YDR356W VMA1P17255 1071 aaKnown RBP1.96□□□□□ -2.1
SPC110YDR356W ATH1P48016 1211 aa1.96□□□□□ -2.1
SPC110YDR356W YDR444WQ04093 687 aa1.96□□□□□ -2.1
SPC110YDR356W MYO2P19524 1574 aaKnown RBP1.96□□□□□ -2.1
SPC110YDR356W ASF1P32447 279 aa1.96□□□□□ -2.1
SPC110YDR356W NAB3P38996 802 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
SPC110YDR356W HAP5Q02516 242 aa1.96□□□□□ -2.1
SPC110YDR356W SKI3P17883 1432 aaKnown RBP1.96□□□□□ -2.1
SPC110YDR356W MET22P32179 357 aa1.95□□□□□ -2.1
SPC110YDR356W ERG12P07277 443 aa1.95□□□□□ -2.1
SPC110YDR356W GRE2Q12068 342 aaKnown RBP1.95□□□□□ -2.1
SPC110YDR356W YML082WQ04533 649 aaKnown RBP1.95□□□□□ -2.1
SPC110YDR356W YGL081WP53156 320 aa1.94□□□□□ -2.1
SPC110YDR356W SNU71P53207 620 aaKnown RBP1.94□□□□□ -2.1
SPC110YDR356W LTE1P07866 1435 aa1.94□□□□□ -2.1
SPC110YDR356W QCR6P00127 147 aa1.93□□□□□ -2.1
SPC110YDR356W YGR035CP53222 116 aa1.93□□□□□ -2.1
SPC110YDR356W BNI4P53858 892 aa1.93□□□□□ -2.1
SPC110YDR356W RTS3P53289 263 aa1.92□□□□□ -2.1
SPC110YDR356W SAM3Q08986 587 aa1.92□□□□□ -2.1
SPC110YDR356W SIN3P22579 1536 aa1.92□□□□□ -2.1
SPC110YDR356W PET111P08468 800 aa1.92□□□□□ -2.1
SPC110YDR356W LEU3P08638 886 aa1.92□□□□□ -2.1
SPC110YDR356W SLD2P34252 453 aa1.92□□□□□ -2.1
SPC110YDR356W RPN1P38764 993 aaKnown RBP1.92□□□□□ -2.1
SPC110YDR356W IOC4Q04213 475 aa1.92□□□□□ -2.1
SPC110YDR356W SEC3P33332 1336 aaKnown RBP1.92□□□□□ -2.1
SPC110YDR356W RTG3P38165 486 aa1.91□□□□□ -2.1
SPC110YDR356W SEC27P41811 889 aaKnown RBP1.91□□□□□ -2.1
SPC110YDR356W RPS0AP32905 252 aaKnown RBP1.91□□□□□ -2.1
SPC110YDR356W HUL5P53119 910 aa1.91□□□□□ -2.1
SPC110YDR356W YOR093CQ12275 1648 aa1.91□□□□□ -2.1
SPC110YDR356W NOP2P40991 618 aaKnown RBP1.9□□□□□ -2.1
SPC110YDR356W SAS4Q04003 481 aa1.9□□□□□ -2.1
SPC110YDR356W NOP53Q12080 455 aaKnown RBP1.9□□□□□ -2.1
SPC110YDR356W HSC82P15108 705 aaKnown RBP1.9□□□□□ -2.11
SPC110YDR356W TCB3Q03640 1545 aaKnown RBP1.9□□□□□ -2.11
SPC110YDR356W BRN1P38170 754 aa1.9□□□□□ -2.11
SPC110YDR356W DMA2P53924 522 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms