RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeastyeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTN1YDR233C YDR090CQ03193 310 aa9.84□□□□□ -0.83
RTN1YDR233C YLR326WQ06170 240 aaKnown RBP9.84□□□□□ -0.83
RTN1YDR233C MAK21Q12176 1025 aaKnown RBP9.84□□□□□ -0.83
RTN1YDR233C COX6P00427 148 aa9.83□□□□□ -0.84
RTN1YDR233C NST1P53935 1240 aa9.83□□□□□ -0.84
RTN1YDR233C DCW1P36091 449 aa9.82□□□□□ -0.84
RTN1YDR233C NUP42P49686 430 aaKnown RBP9.81□□□□□ -0.84
RTN1YDR233C WSC3Q12215 556 aa9.8□□□□□ -0.84
RTN1YDR233C MSB4Q12317 492 aa9.8□□□□□ -0.84
RTN1YDR233C ABP1P15891 592 aaKnown RBP9.79□□□□□ -0.84
RTN1YDR233C YNR021WP53723 404 aaKnown RBP9.79□□□□□ -0.84
RTN1YDR233C TAF7Q05021 590 aa9.78□□□□□ -0.84
RTN1YDR233C HTA1P04911 132 aaKnown RBP9.76□□□□□ -0.85
RTN1YDR233C HTA2P04912 132 aa9.76□□□□□ -0.85
RTN1YDR233C KEX1P09620 729 aa9.76□□□□□ -0.85
RTN1YDR233C DIT2P21595 489 aa9.76□□□□□ -0.85
RTN1YDR233C YBL029C-AQ3E756 94 aa9.75□□□□□ -0.85
RTN1YDR233C GLC3P32775 704 aa9.73□□□□□ -0.85
RTN1YDR233C ILV3P39522 585 aaKnown RBP9.73□□□□□ -0.85
RTN1YDR233C PCS60P38137 543 aaKnown RBP RIP-Chip data9.72□□□□□ -0.85not detected
RTN1YDR233C VNX1P42839 908 aa9.71□□□□□ -0.86
RTN1YDR233C RAD54P32863 898 aa9.7□□□□□ -0.86
RTN1YDR233C AI4P03878 556 aa9.68□□□□□ -0.86
RTN1YDR233C MPH3P0CE00 602 aa9.68□□□□□ -0.86
RTN1YDR233C KIN1P13185 1064 aa9.67□□□□□ -0.86
RTN1YDR233C TRP5P00931 707 aaKnown RBP9.66□□□□□ -0.86
RTN1YDR233C EAP1P36041 632 aaKnown RBP9.66□□□□□ -0.86
RTN1YDR233C KIC1P38692 1080 aa9.66□□□□□ -0.86
RTN1YDR233C YEL023CP39992 682 aa9.66□□□□□ -0.86
RTN1YDR233C AIM7Q12156 149 aa9.66□□□□□ -0.86
RTN1YDR233C TIF11P38912 153 aaKnown RBP9.63□□□□□ -0.87
RTN1YDR233C ULI1P43604 169 aa9.61□□□□□ -0.87
RTN1YDR233C DMA2P53924 522 aa9.61□□□□□ -0.87
RTN1YDR233C ORC6P38826 435 aa9.6□□□□□ -0.87
RTN1YDR233C UBP9P39967 754 aa9.6□□□□□ -0.87
RTN1YDR233C DAN4P47179 1161 aa9.6□□□□□ -0.87
RTN1YDR233C SPP1Q03012 353 aa9.59□□□□□ -0.87
RTN1YDR233C IOC2Q12072 812 aa9.59□□□□□ -0.87
RTN1YDR233C PTC4P38089 393 aa9.58□□□□□ -0.88
RTN1YDR233C SLI15P38283 698 aa9.58□□□□□ -0.88
RTN1YDR233C PSE1P32337 1089 aaKnown RBP9.56□□□□□ -0.88
RTN1YDR233C JIP4Q03361 876 aa9.56□□□□□ -0.88
RTN1YDR233C ATF2P53296 535 aa9.55□□□□□ -0.88
RTN1YDR233C GAP1P19145 602 aaPredicted RBP9.51□□□□□ -0.89
RTN1YDR233C YNL035CP53962 389 aaKnown RBP9.49□□□□□ -0.89
RTN1YDR233C RGR1P19263 1082 aa9.48□□□□□ -0.89
RTN1YDR233C CDC73Q06697 393 aa9.48□□□□□ -0.89
RTN1YDR233C LDB19Q12502 818 aa9.48□□□□□ -0.89
RTN1YDR233C GUA1P38625 525 aaKnown RBP9.47□□□□□ -0.89
RTN1YDR233C MVP1P40959 511 aaKnown RBP9.46□□□□□ -0.9
RTN1YDR233C RTG1P32607 177 aa9.45□□□□□ -0.9
RTN1YDR233C BUD31P25337 157 aaPredicted RBP9.44□□□□□ -0.9
RTN1YDR233C MID1P41821 548 aa9.44□□□□□ -0.9
RTN1YDR233C PML39Q03760 334 aa9.43□□□□□ -0.9
RTN1YDR233C CSC1Q06538 782 aa9.42□□□□□ -0.9
RTN1YDR233C SEC61P32915 480 aa9.4□□□□□ -0.9
RTN1YDR233C TEA1P47988 759 aa9.4□□□□□ -0.9
RTN1YDR233C MPC54Q08550 464 aa9.39□□□□□ -0.91
RTN1YDR233C RPP1BP10622 106 aaKnown RBP9.38□□□□□ -0.91
RTN1YDR233C YPR109WQ06104 294 aa9.37□□□□□ -0.91
RTN1YDR233C TFB4Q12004 338 aa9.37□□□□□ -0.91
RTN1YDR233C CLB5P30283 435 aa9.36□□□□□ -0.91
RTN1YDR233C DPL1Q05567 589 aa9.36□□□□□ -0.91
RTN1YDR233C HPC2Q01448 625 aa9.35□□□□□ -0.91
RTN1YDR233C KTR1P27810 393 aaKnown RBP9.34□□□□□ -0.91
RTN1YDR233C FKH1P40466 484 aa9.34□□□□□ -0.91
RTN1YDR233C CSN12P47130 423 aa9.33□□□□□ -0.92
RTN1YDR233C NIS1P53939 407 aa9.33□□□□□ -0.92
RTN1YDR233C PEX29Q03370 554 aa9.32□□□□□ -0.92
RTN1YDR233C NCR1Q12200 1170 aa9.32□□□□□ -0.92
RTN1YDR233C TUM1Q08686 304 aaKnown RBP9.31□□□□□ -0.92
RTN1YDR233C PEX21P50091 288 aa9.3□□□□□ -0.92
RTN1YDR233C TFB3Q03290 321 aa9.3□□□□□ -0.92
RTN1YDR233C YDL129WQ07555 291 aa9.3□□□□□ -0.92
RTN1YDR233C FPK1P53739 893 aa9.28□□□□□ -0.92
RTN1YDR233C TYW1Q08960 810 aaKnown RBP9.28□□□□□ -0.92
RTN1YDR233C ISU2Q12056 156 aa9.28□□□□□ -0.92
RTN1YDR233C SSA2P10592 639 aaKnown RBP9.27□□□□□ -0.93
RTN1YDR233C TFG1P41895 735 aaPredicted RBP9.27□□□□□ -0.93
RTN1YDR233C NMA111P53920 997 aa9.27□□□□□ -0.93
RTN1YDR233C YDR344CQ05510 147 aa9.27□□□□□ -0.93
RTN1YDR233C YRR1Q12172 810 aa9.27□□□□□ -0.93
RTN1YDR233C SIT4P20604 311 aa9.25□□□□□ -0.93
RTN1YDR233C HST2P53686 357 aa9.25□□□□□ -0.93
RTN1YDR233C PKC1P24583 1151 aa9.24□□□□□ -0.93
RTN1YDR233C HGH1P48362 394 aaKnown RBP9.24□□□□□ -0.93
RTN1YDR233C AIR2Q12476 344 aaKnown RBP9.24□□□□□ -0.93
RTN1YDR233C YMR196WQ04336 1088 aa9.23□□□□□ -0.93
RTN1YDR233C SAP30P38429 201 aa9.22□□□□□ -0.93
RTN1YDR233C SCJ1P25303 377 aa9.21□□□□□ -0.94
RTN1YDR233C GLN1P32288 370 aaKnown RBP9.21□□□□□ -0.94
RTN1YDR233C BRL1P38770 471 aa9.21□□□□□ -0.94
RTN1YDR233C RLF2Q12495 606 aa9.21□□□□□ -0.94
RTN1YDR233C ARH1P48360 493 aa9.19□□□□□ -0.94
RTN1YDR233C MMP1Q12372 583 aa9.19□□□□□ -0.94
RTN1YDR233C PDR1P12383 1068 aa9.18□□□□□ -0.94
RTN1YDR233C ESS1P22696 170 aa9.18□□□□□ -0.94
RTN1YDR233C HAP5Q02516 242 aa9.18□□□□□ -0.94
RTN1YDR233C NUD1P32336 851 aa9.16□□□□□ -0.94
RTN1YDR233C YJU3P28321 313 aa9.15□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms