RNA–Protein interactions for RNA: YDR143C

SAN1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene SAN1, Length 1,833 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAN1YDR143C TY1B-BLQ12490 1755 aa12.49□□□□□ -0.41
SAN1YDR143C IFH1P39520 1085 aa12.46□□□□□ -0.41
SAN1YDR143C ULS1Q08562 1619 aa12.46□□□□□ -0.41
SAN1YDR143C SNT2P53127 1403 aa12.42□□□□□ -0.42
SAN1YDR143C NTE1Q04958 1679 aa12.39□□□□□ -0.43
SAN1YDR143C GEA1P47102 1408 aaPredicted RBP12.38□□□□□ -0.43
SAN1YDR143C RPO21P04050 1733 aaKnown RBP12.35□□□□□ -0.43
SAN1YDR143C NUP159P40477 1460 aa12.34□□□□□ -0.43
SAN1YDR143C RTT106P40161 455 aa12.33□□□□□ -0.44
SAN1YDR143C GEA2P39993 1459 aaKnown RBP12.28□□□□□ -0.44
SAN1YDR143C TY3B-GQ99315 1547 aa12.27□□□□□ -0.44
SAN1YDR143C MET5P47169 1442 aa12.27□□□□□ -0.45
SAN1YDR143C IKI3Q06706 1349 aaKnown RBP12.26□□□□□ -0.45
SAN1YDR143C IRC20Q06554 1556 aa12.24□□□□□ -0.45
SAN1YDR143C YRF1-1P0CX20 1796 aa12.23□□□□□ -0.45
SAN1YDR143C YRF1-5P0CX21 1796 aa12.23□□□□□ -0.45
SAN1YDR143C YRF1-8P0CX22 1796 aa12.23□□□□□ -0.45
SAN1YDR143C VPS15P22219 1454 aa12.22□□□□□ -0.45
SAN1YDR143C YBT1P32386 1661 aa12.17□□□□□ -0.46
SAN1YDR143C MET10P39692 1035 aa12.17□□□□□ -0.46
SAN1YDR143C SSM4P40318 1319 aa12.16□□□□□ -0.46
SAN1YDR143C NUP170P38181 1502 aa12.16□□□□□ -0.46
SAN1YDR143C SPO14P36126 1683 aa12.15□□□□□ -0.46
SAN1YDR143C CAT8P39113 1433 aa12.14□□□□□ -0.47
SAN1YDR143C PDR12Q02785 1511 aa12.13□□□□□ -0.47
SAN1YDR143C NUP157P40064 1391 aaKnown RBP12.11□□□□□ -0.47
SAN1YDR143C GDB1Q06625 1536 aa12.1□□□□□ -0.47
SAN1YDR143C PDR10P51533 1564 aa12.1□□□□□ -0.47
SAN1YDR143C CKB1P43639 278 aa12.06□□□□□ -0.48
SAN1YDR143C ARO1P08566 1588 aaKnown RBP12.05□□□□□ -0.48
SAN1YDR143C BUD3P25558 1636 aa12.01□□□□□ -0.49
SAN1YDR143C LTE1P07866 1435 aa12.01□□□□□ -0.49
SAN1YDR143C SRB8P25648 1427 aa11.98□□□□□ -0.49
SAN1YDR143C IQG1Q12280 1495 aa11.97□□□□□ -0.49
SAN1YDR143C YSP2Q06681 1438 aa11.93□□□□□ -0.5
SAN1YDR143C DRS2P39524 1355 aa11.88□□□□□ -0.51
SAN1YDR143C BUD21Q08492 214 aaPredicted RBP11.87□□□□□ -0.51
SAN1YDR143C ITT1Q04638 464 aa11.84□□□□□ -0.51
SAN1YDR143C BNR1P40450 1375 aa11.82□□□□□ -0.52
SAN1YDR143C MMS1Q06211 1407 aa11.82□□□□□ -0.52
SAN1YDR143C BNI1P41832 1953 aa11.8□□□□□ -0.52
SAN1YDR143C DOP1Q03921 1698 aa11.78□□□□□ -0.52
SAN1YDR143C TRM3Q07527 1436 aa11.77□□□□□ -0.53
SAN1YDR143C SEC7P11075 2009 aaKnown RBP11.76□□□□□ -0.53
SAN1YDR143C GCN2P15442 1659 aa11.75□□□□□ -0.53
SAN1YDR143C CHC1P22137 1653 aaKnown RBP11.73□□□□□ -0.53
SAN1YDR143C YOR093CQ12275 1648 aa11.65□□□□□ -0.54
SAN1YDR143C NOP7P53261 605 aaKnown RBP11.61□□□□□ -0.55
SAN1YDR143C VMR1P38735 1592 aa11.6□□□□□ -0.55
SAN1YDR143C PDR5P33302 1511 aaKnown RBP11.59□□□□□ -0.55
SAN1YDR143C PAF1P38351 445 aa11.58□□□□□ -0.56
SAN1YDR143C NUP188P52593 1655 aaKnown RBP11.57□□□□□ -0.56
SAN1YDR143C PDR11P40550 1411 aa11.56□□□□□ -0.56
SAN1YDR143C DNF2Q12675 1612 aa11.55□□□□□ -0.56
SAN1YDR143C IML1P47170 1584 aa11.54□□□□□ -0.56
SAN1YDR143C BFR2Q06631 534 aaKnown RBP11.53□□□□□ -0.56
SAN1YDR143C TYS1P36421 394 aaKnown RBP11.49□□□□□ -0.57
SAN1YDR143C RAV1P47104 1357 aa11.49□□□□□ -0.57
SAN1YDR143C POL5P39985 1022 aaKnown RBP11.48□□□□□ -0.57
SAN1YDR143C IPL1P38991 367 aa11.46□□□□□ -0.57
SAN1YDR143C URN1Q06525 465 aaKnown RBP11.46□□□□□ -0.57
SAN1YDR143C YAP3P38749 330 aa11.44□□□□□ -0.58
SAN1YDR143C RTC1Q08281 1341 aa11.44□□□□□ -0.58
SAN1YDR143C ORC1P54784 914 aaPredicted RBP11.42□□□□□ -0.58
SAN1YDR143C ABP1P15891 592 aaKnown RBP11.41□□□□□ -0.58
SAN1YDR143C TAF5P38129 798 aa11.39□□□□□ -0.59
SAN1YDR143C NUP192P47054 1683 aa11.36□□□□□ -0.59
SAN1YDR143C DNF3Q12674 1656 aa11.34□□□□□ -0.59
SAN1YDR143C ESL2P36168 1195 aa11.31□□□□□ -0.6
SAN1YDR143C TY3B-IQ7LHG5 1498 aaKnown RBP11.3□□□□□ -0.6
SAN1YDR143C RAD9P14737 1309 aa11.28□□□□□ -0.6
SAN1YDR143C KIP3P53086 805 aaKnown RBP11.28□□□□□ -0.6
SAN1YDR143C ALD4P46367 519 aaKnown RBP11.25□□□□□ -0.61
SAN1YDR143C CAB1Q04430 367 aa11.24□□□□□ -0.61
SAN1YDR143C MAK10Q02197 733 aa11.23□□□□□ -0.61
SAN1YDR143C YLR419WQ06698 1435 aaKnown RBP11.23□□□□□ -0.61
SAN1YDR143C HAP1P0CE41 1502 aa11.23□□□□□ -0.61
SAN1YDR143C BCK1Q01389 1478 aa11.22□□□□□ -0.61
SAN1YDR143C TAF8Q03750 510 aa11.22□□□□□ -0.61
SAN1YDR143C MHP1P43638 1398 aa11.21□□□□□ -0.61
SAN1YDR143C KRE5P22023 1365 aa11.2□□□□□ -0.62
SAN1YDR143C SPT7P35177 1332 aa11.2□□□□□ -0.62
SAN1YDR143C SPE2P21182 396 aa11.19□□□□□ -0.62
SAN1YDR143C MRX12P47084 519 aa11.18□□□□□ -0.62
SAN1YDR143C RIA1P53893 1110 aa11.16□□□□□ -0.62
SAN1YDR143C FAP1P53971 965 aa11.16□□□□□ -0.62
SAN1YDR143C SEC3P33332 1336 aaKnown RBP11.15□□□□□ -0.63
SAN1YDR143C LEU3P08638 886 aa11.14□□□□□ -0.63
SAN1YDR143C PSD2P53037 1138 aaKnown RBP11.13□□□□□ -0.63
SAN1YDR143C PDS5Q04264 1277 aa11.13□□□□□ -0.63
SAN1YDR143C NSR1P27476 414 aaKnown RBP RIP-Chip data11.12□□□□□ -0.63not detected
SAN1YDR143C NAP1P25293 417 aaKnown RBP11.11□□□□□ -0.63
SAN1YDR143C CFT1Q06632 1357 aaKnown RBP11.1□□□□□ -0.63
SAN1YDR143C CHZ1P40019 153 aaPredicted RBP11.09□□□□□ -0.63
SAN1YDR143C USO1P25386 1790 aa11.08□□□□□ -0.64
SAN1YDR143C NST1P53935 1240 aa11.06□□□□□ -0.64
SAN1YDR143C ENP1P38333 483 aaKnown RBP11.05□□□□□ -0.64
SAN1YDR143C RCM1P53972 490 aa11.05□□□□□ -0.64
SAN1YDR143C SCT1P32784 759 aa11.04□□□□□ -0.64
SAN1YDR143C RTG3P38165 486 aa11.04□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms