RNA–Protein interactions for RNA: YDR084C

TVP23, Transcript of Integral membrane protein, yeastyeast

Gene TVP23, Length 600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP23YDR084C VTH2P40890 1549 aa13.2□□□□□ -0.3
TVP23YDR084C TAF7Q05021 590 aa13.18□□□□□ -0.3
TVP23YDR084C SNQ2P32568 1501 aaKnown RBP13.18□□□□□ -0.3
TVP23YDR084C RPA190P10964 1664 aaKnown RBP13.17□□□□□ -0.3
TVP23YDR084C MET5P47169 1442 aa13.13□□□□□ -0.31
TVP23YDR084C TY1B-JR2P47100 1755 aaKnown RBP13.08□□□□□ -0.32
TVP23YDR084C TY1B-ER2Q03619 1755 aa13.08□□□□□ -0.32
TVP23YDR084C TY1B-MR1Q04214 1755 aa13.08□□□□□ -0.32
TVP23YDR084C TY1B-MR2Q04670 1755 aaKnown RBP13.08□□□□□ -0.32
TVP23YDR084C TY1B-LR1Q12088 1755 aaKnown RBP13.08□□□□□ -0.32
TVP23YDR084C TY1B-NL1Q12112 1755 aa13.08□□□□□ -0.32
TVP23YDR084C TY1B-GR1Q12141 1755 aa13.08□□□□□ -0.32
TVP23YDR084C TY1B-BLQ12490 1755 aa13.08□□□□□ -0.32
TVP23YDR084C IFH1P39520 1085 aa13.08□□□□□ -0.32
TVP23YDR084C RTT106P40161 455 aa13.08□□□□□ -0.32
TVP23YDR084C NUP159P40477 1460 aa13.08□□□□□ -0.32
TVP23YDR084C SNT2P53127 1403 aa13.06□□□□□ -0.32
TVP23YDR084C MRPL32P25348 183 aa13.04□□□□□ -0.32
TVP23YDR084C PDR15Q04182 1529 aaKnown RBP13.02□□□□□ -0.33
TVP23YDR084C MLP2P40457 1679 aa13□□□□□ -0.33
TVP23YDR084C NTE1Q04958 1679 aa13□□□□□ -0.33
TVP23YDR084C RPO21P04050 1733 aaKnown RBP12.96□□□□□ -0.33
TVP23YDR084C ULS1Q08562 1619 aa12.96□□□□□ -0.33
TVP23YDR084C MET10P39692 1035 aa12.96□□□□□ -0.33
TVP23YDR084C GEA2P39993 1459 aaKnown RBP12.92□□□□□ -0.34
TVP23YDR084C RPL17AP05740 184 aaKnown RBP12.92□□□□□ -0.34
TVP23YDR084C RPL17BP46990 184 aaKnown RBP12.92□□□□□ -0.34
TVP23YDR084C GEA1P47102 1408 aaPredicted RBP12.92□□□□□ -0.34
TVP23YDR084C YRF1-1P0CX20 1796 aa12.89□□□□□ -0.35
TVP23YDR084C YRF1-5P0CX21 1796 aa12.89□□□□□ -0.35
TVP23YDR084C YRF1-8P0CX22 1796 aa12.89□□□□□ -0.35
TVP23YDR084C LTE1P07866 1435 aa12.89□□□□□ -0.35
TVP23YDR084C VPS15P22219 1454 aa12.89□□□□□ -0.35
TVP23YDR084C REB1P21538 810 aa12.84□□□□□ -0.35
TVP23YDR084C IRC20Q06554 1556 aa12.8□□□□□ -0.36
TVP23YDR084C NUP157P40064 1391 aaKnown RBP12.8□□□□□ -0.36
TVP23YDR084C PDR12Q02785 1511 aa12.78□□□□□ -0.36
TVP23YDR084C SPO14P36126 1683 aa12.77□□□□□ -0.37
TVP23YDR084C CAT8P39113 1433 aa12.75□□□□□ -0.37
TVP23YDR084C TY3B-GQ99315 1547 aa12.74□□□□□ -0.37
TVP23YDR084C ITT1Q04638 464 aa12.73□□□□□ -0.37
TVP23YDR084C GDB1Q06625 1536 aa12.72□□□□□ -0.37
TVP23YDR084C DRS2P39524 1355 aa12.72□□□□□ -0.37
TVP23YDR084C IKI3Q06706 1349 aaKnown RBP12.72□□□□□ -0.37
TVP23YDR084C CKB1P43639 278 aa12.72□□□□□ -0.37
TVP23YDR084C PDR10P51533 1564 aa12.71□□□□□ -0.37
TVP23YDR084C IQG1Q12280 1495 aa12.66□□□□□ -0.38
TVP23YDR084C NUP170P38181 1502 aa12.66□□□□□ -0.38
TVP23YDR084C YBT1P32386 1661 aa12.64□□□□□ -0.39
TVP23YDR084C BNI1P41832 1953 aa12.6□□□□□ -0.39
TVP23YDR084C ARO1P08566 1588 aaKnown RBP12.58□□□□□ -0.4
TVP23YDR084C YGL015CP33199 130 aa12.58□□□□□ -0.4
TVP23YDR084C BUD3P25558 1636 aa12.58□□□□□ -0.4
TVP23YDR084C SSM4P40318 1319 aa12.58□□□□□ -0.4
TVP23YDR084C SRB8P25648 1427 aa12.56□□□□□ -0.4
TVP23YDR084C MMS1Q06211 1407 aa12.55□□□□□ -0.4
TVP23YDR084C YSP2Q06681 1438 aa12.54□□□□□ -0.4
TVP23YDR084C BUD21Q08492 214 aaPredicted RBP12.51□□□□□ -0.41
TVP23YDR084C BNR1P40450 1375 aa12.5□□□□□ -0.41
TVP23YDR084C TRM3Q07527 1436 aa12.5□□□□□ -0.41
TVP23YDR084C CDC27P38042 758 aa12.45□□□□□ -0.42
TVP23YDR084C DOP1Q03921 1698 aa12.45□□□□□ -0.42
TVP23YDR084C ABP1P15891 592 aaKnown RBP12.39□□□□□ -0.43
TVP23YDR084C SEC7P11075 2009 aaKnown RBP12.37□□□□□ -0.43
TVP23YDR084C SPT21P35209 758 aa12.36□□□□□ -0.43
TVP23YDR084C YKR023WP36119 530 aaKnown RBP12.33□□□□□ -0.44
TVP23YDR084C CHC1P22137 1653 aaKnown RBP12.32□□□□□ -0.44
TVP23YDR084C DNF2Q12675 1612 aa12.29□□□□□ -0.44
TVP23YDR084C URN1Q06525 465 aaKnown RBP12.27□□□□□ -0.45
TVP23YDR084C YAP3P38749 330 aa12.23□□□□□ -0.45
TVP23YDR084C PAF1P38351 445 aa12.18□□□□□ -0.46
TVP23YDR084C GCN2P15442 1659 aa12.18□□□□□ -0.46
TVP23YDR084C IPL1P38991 367 aa12.17□□□□□ -0.46
TVP23YDR084C YOR093CQ12275 1648 aa12.16□□□□□ -0.46
TVP23YDR084C TYS1P36421 394 aaKnown RBP12.14□□□□□ -0.47
TVP23YDR084C NOP7P53261 605 aaKnown RBP12.14□□□□□ -0.47
TVP23YDR084C MIF2P35201 549 aa12.12□□□□□ -0.47
TVP23YDR084C NUP188P52593 1655 aaKnown RBP12.11□□□□□ -0.47
TVP23YDR084C VMR1P38735 1592 aa12.09□□□□□ -0.47
TVP23YDR084C PDR5P33302 1511 aaKnown RBP12.09□□□□□ -0.47
TVP23YDR084C HOP09932 586 aa12.08□□□□□ -0.48
TVP23YDR084C IML1P47170 1584 aa12.08□□□□□ -0.48
TVP23YDR084C DCD1P06773 312 aa12.07□□□□□ -0.48
TVP23YDR084C PDR11P40550 1411 aa12.07□□□□□ -0.48
TVP23YDR084C MAP2P38174 421 aaKnown RBP12.06□□□□□ -0.48
TVP23YDR084C TFC8Q12308 588 aa12.04□□□□□ -0.48
TVP23YDR084C MAK10Q02197 733 aa12.02□□□□□ -0.49
TVP23YDR084C RAV1P47104 1357 aa12.02□□□□□ -0.49
TVP23YDR084C DNF3Q12674 1656 aa12.01□□□□□ -0.49
TVP23YDR084C UBP10P53874 792 aaPredicted RBP12□□□□□ -0.49
TVP23YDR084C RTC1Q08281 1341 aa11.99□□□□□ -0.49
TVP23YDR084C TAF5P38129 798 aa11.91□□□□□ -0.5
TVP23YDR084C HAP1P0CE41 1502 aa11.9□□□□□ -0.5
TVP23YDR084C ESL2P36168 1195 aa11.88□□□□□ -0.51
TVP23YDR084C DMA1P38823 416 aa11.86□□□□□ -0.51
TVP23YDR084C ALD4P46367 519 aaKnown RBP11.86□□□□□ -0.51
TVP23YDR084C MRX12P47084 519 aa11.86□□□□□ -0.51
TVP23YDR084C ORC1P54784 914 aaPredicted RBP11.86□□□□□ -0.51
TVP23YDR084C RIM101P33400 625 aa11.85□□□□□ -0.51
TVP23YDR084C CAB1Q04430 367 aa11.84□□□□□ -0.51
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms