RNA–Protein interactions for RNA: YDR081C

PDC2, Transcript of Transcription factor for thiamine-regulated genes, yeast

Gene PDC2, Length 2,778 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDC2	YDR081C	RPN1	P38764	993 aa	Known RBP	4.93	□□□□□ -1.62
PDC2	YDR081C	YOL036W	Q08206	761 aa		4.93	□□□□□ -1.62
PDC2	YDR081C	SAM3	Q08986	587 aa		4.92	□□□□□ -1.62
PDC2	YDR081C	SET4	P42948	560 aa		4.91	□□□□□ -1.62
PDC2	YDR081C	REF2	P42073	533 aa	Predicted RBP	4.91	□□□□□ -1.62
PDC2	YDR081C	TRP5	P00931	707 aa	Known RBP	4.89	□□□□□ -1.63
PDC2	YDR081C	EAP1	P36041	632 aa	Known RBP	4.87	□□□□□ -1.63
PDC2	YDR081C	MON2	P48563	1636 aa	Predicted RBP	4.87	□□□□□ -1.63
PDC2	YDR081C	GRE2	Q12068	342 aa	Known RBP	4.87	□□□□□ -1.63
PDC2	YDR081C	SOL3	P38858	249 aa		4.87	□□□□□ -1.63
PDC2	YDR081C	NUP42	P49686	430 aa	Known RBP	4.87	□□□□□ -1.63
PDC2	YDR081C	YDR090C	Q03193	310 aa		4.87	□□□□□ -1.63
PDC2	YDR081C	MAM3	Q12296	706 aa		4.87	□□□□□ -1.63
PDC2	YDR081C	UBP14	P38237	781 aa	Known RBP	4.86	□□□□□ -1.63
PDC2	YDR081C	IES2	P40154	320 aa		4.86	□□□□□ -1.63
PDC2	YDR081C	GUT1	P32190	709 aa		4.86	□□□□□ -1.63
PDC2	YDR081C	ATH1	P48016	1211 aa		4.86	□□□□□ -1.63
PDC2	YDR081C	COX6	P00427	148 aa		4.85	□□□□□ -1.63
PDC2	YDR081C	VHR2	P40041	505 aa		4.85	□□□□□ -1.63
PDC2	YDR081C	DIT2	P21595	489 aa		4.85	□□□□□ -1.63
PDC2	YDR081C	YJL171C	P46992	396 aa		4.85	□□□□□ -1.63
PDC2	YDR081C	DAN4	P47179	1161 aa		4.85	□□□□□ -1.63
PDC2	YDR081C	NST1	P53935	1240 aa		4.85	□□□□□ -1.63
PDC2	YDR081C	YLR326W	Q06170	240 aa	Known RBP	4.85	□□□□□ -1.63
PDC2	YDR081C	RTG1	P32607	177 aa		4.84	□□□□□ -1.63
PDC2	YDR081C	YNR021W	P53723	404 aa	Known RBP	4.84	□□□□□ -1.63
PDC2	YDR081C	YGR273C	P53329	174 aa		4.84	□□□□□ -1.63
PDC2	YDR081C	GYP5	Q12344	894 aa		4.84	□□□□□ -1.63
PDC2	YDR081C	MAK21	Q12176	1025 aa	Known RBP	4.83	□□□□□ -1.64
PDC2	YDR081C	GLC3	P32775	704 aa		4.82	□□□□□ -1.64
PDC2	YDR081C	DMA2	P53924	522 aa		4.82	□□□□□ -1.64
PDC2	YDR081C	YNL035C	P53962	389 aa	Known RBP	4.82	□□□□□ -1.64
PDC2	YDR081C	NCR1	Q12200	1170 aa		4.82	□□□□□ -1.64
PDC2	YDR081C	BMT6	Q12291	365 aa		4.82	□□□□□ -1.64
PDC2	YDR081C	SEC61	P32915	480 aa		4.82	□□□□□ -1.64
PDC2	YDR081C	KIN1	P13185	1064 aa		4.8	□□□□□ -1.64
PDC2	YDR081C	DCW1	P36091	449 aa		4.8	□□□□□ -1.64
PDC2	YDR081C	KEX1	P09620	729 aa		4.8	□□□□□ -1.64
PDC2	YDR081C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
PDC2	YDR081C	ILV3	P39522	585 aa	Known RBP	4.79	□□□□□ -1.64
PDC2	YDR081C	AIM7	Q12156	149 aa		4.78	□□□□□ -1.64
PDC2	YDR081C	ABP1	P15891	592 aa	Known RBP	4.76	□□□□□ -1.65
PDC2	YDR081C	PTC4	P38089	393 aa		4.76	□□□□□ -1.65
PDC2	YDR081C	YEL023C	P39992	682 aa		4.76	□□□□□ -1.65
PDC2	YDR081C	JIP4	Q03361	876 aa		4.76	□□□□□ -1.65
PDC2	YDR081C	RAD54	P32863	898 aa		4.76	□□□□□ -1.65
PDC2	YDR081C	HTA1	P04911	132 aa	Known RBP	4.75	□□□□□ -1.65
PDC2	YDR081C	HTA2	P04912	132 aa		4.75	□□□□□ -1.65
PDC2	YDR081C	MPH3	P0CE00	602 aa		4.75	□□□□□ -1.65
PDC2	YDR081C	AI4	P03878	556 aa		4.74	□□□□□ -1.65
PDC2	YDR081C	ORC6	P38826	435 aa		4.74	□□□□□ -1.65
PDC2	YDR081C	KIC1	P38692	1080 aa		4.73	□□□□□ -1.65
PDC2	YDR081C	GUA1	P38625	525 aa	Known RBP	4.72	□□□□□ -1.65
PDC2	YDR081C	PSE1	P32337	1089 aa	Known RBP	4.71	□□□□□ -1.65
PDC2	YDR081C	SAP30	P38429	201 aa		4.71	□□□□□ -1.65
PDC2	YDR081C	YDR344C	Q05510	147 aa		4.71	□□□□□ -1.65
PDC2	YDR081C	ATF2	P53296	535 aa		4.71	□□□□□ -1.66
PDC2	YDR081C	YDL129W	Q07555	291 aa		4.71	□□□□□ -1.66
PDC2	YDR081C	SLI15	P38283	698 aa		4.7	□□□□□ -1.66
PDC2	YDR081C	GAP1	P19145	602 aa	Predicted RBP	4.69	□□□□□ -1.66
PDC2	YDR081C	RGR1	P19263	1082 aa		4.67	□□□□□ -1.66
PDC2	YDR081C	TFG1	P41895	735 aa	Predicted RBP	4.67	□□□□□ -1.66
PDC2	YDR081C	MVP1	P40959	511 aa	Known RBP	4.66	□□□□□ -1.66
PDC2	YDR081C	PML39	Q03760	334 aa		4.66	□□□□□ -1.66
PDC2	YDR081C	CDC73	Q06697	393 aa		4.66	□□□□□ -1.66
PDC2	YDR081C	CHL1	P22516	861 aa	Predicted RBP	4.65	□□□□□ -1.67
PDC2	YDR081C	PRE3	P38624	215 aa		4.65	□□□□□ -1.67
PDC2	YDR081C	HPC2	Q01448	625 aa		4.64	□□□□□ -1.67
PDC2	YDR081C	KTR1	P27810	393 aa	Known RBP	4.64	□□□□□ -1.67
PDC2	YDR081C	MID1	P41821	548 aa		4.64	□□□□□ -1.67
PDC2	YDR081C	TEA1	P47988	759 aa		4.63	□□□□□ -1.67
PDC2	YDR081C	TFB3	Q03290	321 aa		4.63	□□□□□ -1.67
PDC2	YDR081C	NIS1	P53939	407 aa		4.61	□□□□□ -1.67
PDC2	YDR081C	CSC1	Q06538	782 aa		4.61	□□□□□ -1.67
PDC2	YDR081C	RLF2	Q12495	606 aa		4.61	□□□□□ -1.67
PDC2	YDR081C	PKC1	P24583	1151 aa		4.61	□□□□□ -1.67
PDC2	YDR081C	CSN12	P47130	423 aa		4.61	□□□□□ -1.67
PDC2	YDR081C	TYW1	Q08960	810 aa	Known RBP	4.6	□□□□□ -1.67
PDC2	YDR081C	YPR109W	Q06104	294 aa		4.6	□□□□□ -1.67
PDC2	YDR081C	MPC54	Q08550	464 aa		4.6	□□□□□ -1.67
PDC2	YDR081C	BCK2	P33306	851 aa		4.59	□□□□□ -1.67
PDC2	YDR081C	CLB5	P30283	435 aa		4.59	□□□□□ -1.68
PDC2	YDR081C	DPL1	Q05567	589 aa		4.59	□□□□□ -1.68
PDC2	YDR081C	TFB4	Q12004	338 aa		4.59	□□□□□ -1.68
PDC2	YDR081C	ARH1	P48360	493 aa		4.58	□□□□□ -1.68
PDC2	YDR081C	FPK1	P53739	893 aa		4.58	□□□□□ -1.68
PDC2	YDR081C	SSA2	P10592	639 aa	Known RBP	4.57	□□□□□ -1.68
PDC2	YDR081C	SCJ1	P25303	377 aa		4.57	□□□□□ -1.68
PDC2	YDR081C	TUM1	Q08686	304 aa	Known RBP	4.57	□□□□□ -1.68
PDC2	YDR081C	RPP1B	P10622	106 aa	Known RBP	4.56	□□□□□ -1.68
PDC2	YDR081C	HST2	P53686	357 aa		4.56	□□□□□ -1.68
PDC2	YDR081C	PEX29	Q03370	554 aa		4.56	□□□□□ -1.68
PDC2	YDR081C	SIT4	P20604	311 aa		4.56	□□□□□ -1.68
PDC2	YDR081C	HGH1	P48362	394 aa	Known RBP	4.56	□□□□□ -1.68
PDC2	YDR081C	BRL1	P38770	471 aa		4.55	□□□□□ -1.68
PDC2	YDR081C	YRR1	Q12172	810 aa		4.55	□□□□□ -1.68
PDC2	YDR081C	GLN1	P32288	370 aa	Known RBP	4.54	□□□□□ -1.68
PDC2	YDR081C	ESS1	P22696	170 aa		4.54	□□□□□ -1.68
PDC2	YDR081C	VRP1	P37370	817 aa		4.54	□□□□□ -1.68
PDC2	YDR081C	PEX21	P50091	288 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms