RNA–Protein interactions for RNA: YDR048C

YDR048C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR048C, Length 315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR048CYDR048C ARH1P48360 493 aa6.63□□□□□ -1.35
YDR048CYDR048C RAS1P01119 309 aa6.62□□□□□ -1.35
YDR048CYDR048C PML39Q03760 334 aa6.62□□□□□ -1.35
YDR048CYDR048C GYP5Q12344 894 aa6.62□□□□□ -1.35
YDR048CYDR048C DCW1P36091 449 aa6.6□□□□□ -1.35
YDR048CYDR048C TRK1P12685 1235 aa6.58□□□□□ -1.36
YDR048CYDR048C STS1P38637 319 aa6.58□□□□□ -1.36
YDR048CYDR048C VPS29P38759 282 aa6.57□□□□□ -1.36
YDR048CYDR048C SPT23P35210 1082 aa6.56□□□□□ -1.36
YDR048CYDR048C PSD2P53037 1138 aaKnown RBP6.55□□□□□ -1.36
YDR048CYDR048C YAH1Q12184 172 aaKnown RBP6.54□□□□□ -1.36
YDR048CYDR048C YML082WQ04533 649 aaKnown RBP6.43□□□□□ -1.38
YDR048CYDR048C MID1P41821 548 aa6.41□□□□□ -1.38
YDR048CYDR048C BNI4P53858 892 aa6.37□□□□□ -1.39
YDR048CYDR048C PTC2P39966 464 aaKnown RBP6.36□□□□□ -1.39
YDR048CYDR048C HAP5Q02516 242 aa6.36□□□□□ -1.39
YDR048CYDR048C YLR271WQ06152 274 aa6.36□□□□□ -1.39
YDR048CYDR048C RTG3P38165 486 aa6.33□□□□□ -1.4
YDR048CYDR048C AMS1P22855 1083 aa6.32□□□□□ -1.4
YDR048CYDR048C GAR1P28007 205 aaKnown RBP6.31□□□□□ -1.4
YDR048CYDR048C PEX29Q03370 554 aa6.31□□□□□ -1.4
YDR048CYDR048C GBP2P25555 427 aaKnown RBP RIP-Chip data6.3□□□□□ -1.4not detected
YDR048CYDR048C TFA1P36100 482 aa6.3□□□□□ -1.4
YDR048CYDR048C GRE2Q12068 342 aaKnown RBP6.17□□□□□ -1.42
YDR048CYDR048C BRE2P43132 505 aa6.15□□□□□ -1.42
YDR048CYDR048C NST1P53935 1240 aa6.15□□□□□ -1.42
YDR048CYDR048C YPR015CQ12531 247 aa6.15□□□□□ -1.42
YDR048CYDR048C RCR1P38212 213 aa6.12□□□□□ -1.43
YDR048CYDR048C SDH2P21801 266 aa6.1□□□□□ -1.43
YDR048CYDR048C MPC54Q08550 464 aa6.09□□□□□ -1.43
YDR048CYDR048C MTC5Q03897 1148 aa6.07□□□□□ -1.44
YDR048CYDR048C GCR2Q01722 534 aa6.06□□□□□ -1.44
YDR048CYDR048C GYP1Q08484 637 aa6.06□□□□□ -1.44
YDR048CYDR048C NMA111P53920 997 aa6.04□□□□□ -1.44
YDR048CYDR048C MPH3P0CE00 602 aa6.03□□□□□ -1.44
YDR048CYDR048C GUT1P32190 709 aa6.03□□□□□ -1.44
YDR048CYDR048C AI4P03878 556 aa6.02□□□□□ -1.45
YDR048CYDR048C RAM1P22007 431 aa6.02□□□□□ -1.45
YDR048CYDR048C CST9Q06032 482 aa6.02□□□□□ -1.45
YDR048CYDR048C SSP1P38871 571 aa6.01□□□□□ -1.45
YDR048CYDR048C ATH1P48016 1211 aa6.01□□□□□ -1.45
YDR048CYDR048C YEL077CQ3E7X8 1277 aa6□□□□□ -1.45
YDR048CYDR048C SOL3P38858 249 aa5.99□□□□□ -1.45
YDR048CYDR048C ILV3P39522 585 aaKnown RBP5.99□□□□□ -1.45
YDR048CYDR048C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.98□□□□□ -1.45not detected
YDR048CYDR048C MET22P32179 357 aa5.96□□□□□ -1.46
YDR048CYDR048C AIR1P40507 360 aaKnown RBP5.93□□□□□ -1.46
YDR048CYDR048C SAS4Q04003 481 aa5.93□□□□□ -1.46
YDR048CYDR048C ENV9Q08651 330 aa5.92□□□□□ -1.46
YDR048CYDR048C MGA2P40578 1113 aa5.89□□□□□ -1.47
YDR048CYDR048C YDL176WQ12027 708 aa5.88□□□□□ -1.47
YDR048CYDR048C PTC3P34221 468 aaKnown RBP5.87□□□□□ -1.47
YDR048CYDR048C DPL1Q05567 589 aa5.87□□□□□ -1.47
YDR048CYDR048C CLA4P48562 842 aa5.82□□□□□ -1.48
YDR048CYDR048C YDR444WQ04093 687 aa5.82□□□□□ -1.48
YDR048CYDR048C MRF1P30775 413 aaPredicted RBP5.8□□□□□ -1.48
YDR048CYDR048C MIF2P35201 549 aa5.8□□□□□ -1.48
YDR048CYDR048C EDS1P38073 919 aa5.8□□□□□ -1.48
YDR048CYDR048C SLI15P38283 698 aa5.77□□□□□ -1.49
YDR048CYDR048C ISU2Q12056 156 aa5.77□□□□□ -1.49
YDR048CYDR048C PDR1P12383 1068 aa5.72□□□□□ -1.49
YDR048CYDR048C LCB5Q06147 687 aaKnown RBP5.7□□□□□ -1.5
YDR048CYDR048C CST6P40535 587 aa5.69□□□□□ -1.5
YDR048CYDR048C CDC4P07834 779 aa5.68□□□□□ -1.5
YDR048CYDR048C YGR273CP53329 174 aa5.66□□□□□ -1.5
YDR048CYDR048C ERG12P07277 443 aa5.65□□□□□ -1.5
YDR048CYDR048C LAM6Q08001 693 aa5.61□□□□□ -1.51
YDR048CYDR048C MAK11P20484 414 aaKnown RBP5.59□□□□□ -1.51
YDR048CYDR048C RAM2P29703 316 aa5.59□□□□□ -1.51
YDR048CYDR048C NRD1P53617 575 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
YDR048CYDR048C PRT1P06103 763 aaKnown RBP5.56□□□□□ -1.52
YDR048CYDR048C TRK2P28584 889 aa5.56□□□□□ -1.52
YDR048CYDR048C CDC73Q06697 393 aa5.56□□□□□ -1.52
YDR048CYDR048C BUD20Q08004 166 aaPredicted RBP5.56□□□□□ -1.52
YDR048CYDR048C LSB3P43603 459 aaKnown RBP5.51□□□□□ -1.53
YDR048CYDR048C COQ8P27697 501 aa5.5□□□□□ -1.53
YDR048CYDR048C NOP53Q12080 455 aaKnown RBP5.49□□□□□ -1.53
YDR048CYDR048C RRD1P40454 393 aaKnown RBP5.48□□□□□ -1.53
YDR048CYDR048C FRK1Q03002 865 aaPredicted RBP5.48□□□□□ -1.53
YDR048CYDR048C CAF120P53836 1060 aa5.46□□□□□ -1.54
YDR048CYDR048C HED1Q03937 162 aa5.44□□□□□ -1.54
YDR048CYDR048C YGR035CP53222 116 aa5.42□□□□□ -1.54
YDR048CYDR048C ASH1P34233 588 aa5.41□□□□□ -1.54
YDR048CYDR048C ACO2P39533 789 aa5.41□□□□□ -1.54
YDR048CYDR048C STR2P47164 639 aa5.41□□□□□ -1.54
YDR048CYDR048C ICP55P40051 511 aa5.4□□□□□ -1.54
YDR048CYDR048C BDP1P46678 594 aa5.4□□□□□ -1.54
YDR048CYDR048C KEX1P09620 729 aa5.39□□□□□ -1.55
YDR048CYDR048C PUS1Q12211 544 aaKnown RBP5.38□□□□□ -1.55
YDR048CYDR048C ISM1P48526 1002 aa5.37□□□□□ -1.55
YDR048CYDR048C AFT1P22149 690 aa5.36□□□□□ -1.55
YDR048CYDR048C MET32Q12041 191 aa5.35□□□□□ -1.55
YDR048CYDR048C HPF1Q05164 967 aa5.33□□□□□ -1.56
YDR048CYDR048C SPT16P32558 1035 aaKnown RBP5.32□□□□□ -1.56
YDR048CYDR048C HST3P53687 447 aa5.31□□□□□ -1.56
YDR048CYDR048C YJR115WP47152 169 aa5.3□□□□□ -1.56
YDR048CYDR048C SET1P38827 1080 aaKnown RBP5.28□□□□□ -1.56
YDR048CYDR048C YRR1Q12172 810 aa5.26□□□□□ -1.57
YDR048CYDR048C TY1A-DR4O74302 440 aa5.25□□□□□ -1.57
YDR048CYDR048C TY1A-HP0C2I4 478 aaKnown RBP5.25□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms