RNA–Protein interactions for RNA: YDR013W

PSF1, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeast

Gene PSF1, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSF1	YDR013W	PTC4	P38089	393 aa		5.63	□□□□□ -1.51
PSF1	YDR013W	RTG3	P38165	486 aa		5.63	□□□□□ -1.51
PSF1	YDR013W	YEL023C	P39992	682 aa		5.62	□□□□□ -1.51
PSF1	YDR013W	ABP1	P15891	592 aa	Known RBP	5.61	□□□□□ -1.51
PSF1	YDR013W	RGA1	P39083	1007 aa		5.6	□□□□□ -1.51
PSF1	YDR013W	CST9	Q06032	482 aa		5.58	□□□□□ -1.52
PSF1	YDR013W	ELP4	Q02884	456 aa	Known RBP	5.57	□□□□□ -1.52
PSF1	YDR013W	SRC1	Q03707	834 aa		5.57	□□□□□ -1.52
PSF1	YDR013W	RCR1	P38212	213 aa		5.55	□□□□□ -1.52
PSF1	YDR013W	PML39	Q03760	334 aa		5.54	□□□□□ -1.52
PSF1	YDR013W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.49	□□□□□ -1.53	not detected
PSF1	YDR013W	ARH1	P48360	493 aa		5.47	□□□□□ -1.53
PSF1	YDR013W	SSP1	P38871	571 aa		5.45	□□□□□ -1.54
PSF1	YDR013W	MID1	P41821	548 aa		5.44	□□□□□ -1.54
PSF1	YDR013W	MGA2	P40578	1113 aa		5.43	□□□□□ -1.54
PSF1	YDR013W	SPT23	P35210	1082 aa		5.4	□□□□□ -1.54
PSF1	YDR013W	GRE2	Q12068	342 aa	Known RBP	5.4	□□□□□ -1.54
PSF1	YDR013W	SGS1	P35187	1447 aa		5.37	□□□□□ -1.55
PSF1	YDR013W	NST1	P53935	1240 aa		5.35	□□□□□ -1.55
PSF1	YDR013W	RAS1	P01119	309 aa		5.34	□□□□□ -1.55
PSF1	YDR013W	PEX29	Q03370	554 aa		5.34	□□□□□ -1.55
PSF1	YDR013W	HAP5	Q02516	242 aa		5.33	□□□□□ -1.56
PSF1	YDR013W	ATH1	P48016	1211 aa		5.32	□□□□□ -1.56
PSF1	YDR013W	YML082W	Q04533	649 aa	Known RBP	5.31	□□□□□ -1.56
PSF1	YDR013W	GUT1	P32190	709 aa		5.3	□□□□□ -1.56
PSF1	YDR013W	PTC2	P39966	464 aa	Known RBP	5.3	□□□□□ -1.56
PSF1	YDR013W	BNI4	P53858	892 aa		5.3	□□□□□ -1.56
PSF1	YDR013W	SOL3	P38858	249 aa		5.29	□□□□□ -1.56
PSF1	YDR013W	MIF2	P35201	549 aa		5.28	□□□□□ -1.56
PSF1	YDR013W	PTC3	P34221	468 aa	Known RBP	5.27	□□□□□ -1.57
PSF1	YDR013W	EDS1	P38073	919 aa		5.27	□□□□□ -1.57
PSF1	YDR013W	ILV3	P39522	585 aa	Known RBP	5.26	□□□□□ -1.57
PSF1	YDR013W	MPH3	P0CE00	602 aa		5.25	□□□□□ -1.57
PSF1	YDR013W	AI4	P03878	556 aa		5.24	□□□□□ -1.57
PSF1	YDR013W	TFA1	P36100	482 aa		5.24	□□□□□ -1.57
PSF1	YDR013W	INO80	P53115	1489 aa		5.24	□□□□□ -1.57
PSF1	YDR013W	MPC54	Q08550	464 aa		5.23	□□□□□ -1.57
PSF1	YDR013W	TRK1	P12685	1235 aa		5.21	□□□□□ -1.58
PSF1	YDR013W	YPR015C	Q12531	247 aa		5.21	□□□□□ -1.58
PSF1	YDR013W	NMA111	P53920	997 aa		5.19	□□□□□ -1.58
PSF1	YDR013W	YPL062W	Q02781	134 aa		5.19	□□□□□ -1.58
PSF1	YDR013W	SPA2	P23201	1466 aa	Known RBP	5.19	□□□□□ -1.58
PSF1	YDR013W	MAK11	P20484	414 aa	Known RBP	5.17	□□□□□ -1.58
PSF1	YDR013W	AMS1	P22855	1083 aa		5.16	□□□□□ -1.58
PSF1	YDR013W	TCB3	Q03640	1545 aa	Known RBP	5.15	□□□□□ -1.58
PSF1	YDR013W	SSN2	P38931	1420 aa		5.14	□□□□□ -1.59
PSF1	YDR013W	RAM1	P22007	431 aa		5.13	□□□□□ -1.59
PSF1	YDR013W	COQ8	P27697	501 aa		5.12	□□□□□ -1.59
PSF1	YDR013W	RAM2	P29703	316 aa		5.12	□□□□□ -1.59
PSF1	YDR013W	SDH2	P21801	266 aa		5.11	□□□□□ -1.59
PSF1	YDR013W	SLI15	P38283	698 aa		5.11	□□□□□ -1.59
PSF1	YDR013W	DPL1	Q05567	589 aa		5.11	□□□□□ -1.59
PSF1	YDR013W	YGR273C	P53329	174 aa		5.1	□□□□□ -1.59
PSF1	YDR013W	GYP1	Q08484	637 aa		5.1	□□□□□ -1.59
PSF1	YDR013W	ISU2	Q12056	156 aa		5.03	□□□□□ -1.6
PSF1	YDR013W	PDR1	P12383	1068 aa		5.01	□□□□□ -1.61
PSF1	YDR013W	GAR1	P28007	205 aa	Known RBP	5.01	□□□□□ -1.61
PSF1	YDR013W	SPT6	P23615	1451 aa	Known RBP	5	□□□□□ -1.61
PSF1	YDR013W	YEL077C	Q3E7X8	1277 aa		5	□□□□□ -1.61
PSF1	YDR013W	SAS4	Q04003	481 aa		4.99	□□□□□ -1.61
PSF1	YDR013W	CDC73	Q06697	393 aa		4.98	□□□□□ -1.61
PSF1	YDR013W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
PSF1	YDR013W	BRE2	P43132	505 aa		4.97	□□□□□ -1.61
PSF1	YDR013W	HSL1	P34244	1518 aa		4.96	□□□□□ -1.62
PSF1	YDR013W	TY1B-DR4	Q07793	1604 aa		4.95	□□□□□ -1.62
PSF1	YDR013W	AIR1	P40507	360 aa	Known RBP	4.95	□□□□□ -1.62
PSF1	YDR013W	KEX1	P09620	729 aa		4.94	□□□□□ -1.62
PSF1	YDR013W	XRN1	P22147	1528 aa	Known RBP	4.92	□□□□□ -1.62
PSF1	YDR013W	CLA4	P48562	842 aa		4.92	□□□□□ -1.62
PSF1	YDR013W	NOP53	Q12080	455 aa	Known RBP	4.92	□□□□□ -1.62
PSF1	YDR013W	MRF1	P30775	413 aa	Predicted RBP	4.91	□□□□□ -1.62
PSF1	YDR013W	GCR2	Q01722	534 aa		4.9	□□□□□ -1.63
PSF1	YDR013W	MON2	P48563	1636 aa	Predicted RBP	4.9	□□□□□ -1.63
PSF1	YDR013W	TAF2	P23255	1407 aa		4.89	□□□□□ -1.63
PSF1	YDR013W	SWR1	Q05471	1514 aa		4.88	□□□□□ -1.63
PSF1	YDR013W	HIR3	P47171	1648 aa		4.88	□□□□□ -1.63
PSF1	YDR013W	BUD20	Q08004	166 aa	Predicted RBP	4.88	□□□□□ -1.63
PSF1	YDR013W	CST6	P40535	587 aa		4.87	□□□□□ -1.63
PSF1	YDR013W	THO2	P53552	1597 aa	Known RBP	4.84	□□□□□ -1.63
PSF1	YDR013W	PRT1	P06103	763 aa	Known RBP	4.84	□□□□□ -1.63
PSF1	YDR013W	MET22	P32179	357 aa		4.84	□□□□□ -1.63
PSF1	YDR013W	REV3	P14284	1504 aa		4.83	□□□□□ -1.64
PSF1	YDR013W	ERG12	P07277	443 aa		4.83	□□□□□ -1.64
PSF1	YDR013W	YLR326W	Q06170	240 aa	Known RBP	4.83	□□□□□ -1.64
PSF1	YDR013W	SAS10	Q12136	610 aa	Predicted RBP	4.83	□□□□□ -1.64
PSF1	YDR013W	SKI3	P17883	1432 aa	Known RBP	4.81	□□□□□ -1.64
PSF1	YDR013W	STR2	P47164	639 aa		4.81	□□□□□ -1.64
PSF1	YDR013W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
PSF1	YDR013W	UBP14	P38237	781 aa	Known RBP	4.8	□□□□□ -1.64
PSF1	YDR013W	ISM1	P48526	1002 aa		4.8	□□□□□ -1.64
PSF1	YDR013W	LAM6	Q08001	693 aa		4.8	□□□□□ -1.64
PSF1	YDR013W	ENV9	Q08651	330 aa		4.8	□□□□□ -1.64
PSF1	YDR013W	MYO2	P19524	1574 aa	Known RBP	4.79	□□□□□ -1.64
PSF1	YDR013W	VHR2	P40041	505 aa		4.79	□□□□□ -1.64
PSF1	YDR013W	YRR1	Q12172	810 aa		4.78	□□□□□ -1.64
PSF1	YDR013W	RQC2	Q12532	1038 aa	Known RBP	4.78	□□□□□ -1.64
PSF1	YDR013W	KOG1	P38873	1557 aa		4.78	□□□□□ -1.64
PSF1	YDR013W	CDC4	P07834	779 aa		4.77	□□□□□ -1.65
PSF1	YDR013W	FRK1	Q03002	865 aa	Predicted RBP	4.76	□□□□□ -1.65
PSF1	YDR013W	BUD4	P47136	1447 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms