RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W VPS70P47161 811 aa6.16□□□□□ -1.42
SHS1YDL225W HTA1P04911 132 aaKnown RBP6.15□□□□□ -1.42
SHS1YDL225W HTA2P04912 132 aa6.15□□□□□ -1.42
SHS1YDL225W DCW1P36091 449 aa6.15□□□□□ -1.42
SHS1YDL225W YPR148CQ06523 435 aa6.15□□□□□ -1.42
SHS1YDL225W TRP5P00931 707 aaKnown RBP6.13□□□□□ -1.43
SHS1YDL225W GUT1P32190 709 aa6.13□□□□□ -1.43
SHS1YDL225W TFG1P41895 735 aaPredicted RBP6.13□□□□□ -1.43
SHS1YDL225W LDB19Q12502 818 aa6.13□□□□□ -1.43
SHS1YDL225W CKB1P43639 278 aa6.11□□□□□ -1.43
SHS1YDL225W IOC2Q12072 812 aa6.1□□□□□ -1.43
SHS1YDL225W JIP4Q03361 876 aa6.1□□□□□ -1.43
SHS1YDL225W SPB4P25808 606 aaPredicted RBP6.08□□□□□ -1.44
SHS1YDL225W YNL035CP53962 389 aaKnown RBP6.08□□□□□ -1.44
SHS1YDL225W LEU3P08638 886 aa6.07□□□□□ -1.44
SHS1YDL225W RTG1P32607 177 aa6.07□□□□□ -1.44
SHS1YDL225W PTC4P38089 393 aa6.07□□□□□ -1.44
SHS1YDL225W NCR1Q12200 1170 aa6.07□□□□□ -1.44
SHS1YDL225W YEL023CP39992 682 aa6.07□□□□□ -1.44
SHS1YDL225W SEC61P32915 480 aa6.05□□□□□ -1.44
SHS1YDL225W LEO1P38439 464 aa6.04□□□□□ -1.44
SHS1YDL225W RGA1P39083 1007 aa6.02□□□□□ -1.45
SHS1YDL225W PBS2P08018 668 aa6.01□□□□□ -1.45
SHS1YDL225W REF2P42073 533 aaPredicted RBP6.01□□□□□ -1.45
SHS1YDL225W DSF2P38213 736 aa5.99□□□□□ -1.45
SHS1YDL225W DAN4P47179 1161 aa5.98□□□□□ -1.45
SHS1YDL225W YGR273CP53329 174 aa5.98□□□□□ -1.45
SHS1YDL225W AI4P03878 556 aa5.95□□□□□ -1.46
SHS1YDL225W YDL129WQ07555 291 aa5.95□□□□□ -1.46
SHS1YDL225W MPH3P0CE00 602 aa5.94□□□□□ -1.46
SHS1YDL225W PML39Q03760 334 aa5.94□□□□□ -1.46
SHS1YDL225W UBP14P38237 781 aaKnown RBP5.94□□□□□ -1.46
SHS1YDL225W KIC1P38692 1080 aa5.94□□□□□ -1.46
SHS1YDL225W SOL3P38858 249 aa5.94□□□□□ -1.46
SHS1YDL225W VHR2P40041 505 aa5.94□□□□□ -1.46
SHS1YDL225W COX6P00427 148 aa5.93□□□□□ -1.46
SHS1YDL225W SAP30P38429 201 aa5.93□□□□□ -1.46
SHS1YDL225W MAM3Q12296 706 aa5.93□□□□□ -1.46
SHS1YDL225W RPN1P38764 993 aaKnown RBP5.92□□□□□ -1.46
SHS1YDL225W PEX29Q03370 554 aa5.92□□□□□ -1.46
SHS1YDL225W MAK21Q12176 1025 aaKnown RBP5.92□□□□□ -1.46
SHS1YDL225W RPP1BP10622 106 aaKnown RBP5.91□□□□□ -1.46
SHS1YDL225W YDR090CQ03193 310 aa5.91□□□□□ -1.46
SHS1YDL225W YLR326WQ06170 240 aaKnown RBP5.9□□□□□ -1.47
SHS1YDL225W KEX1P09620 729 aa5.89□□□□□ -1.47
SHS1YDL225W NST1P53935 1240 aa5.89□□□□□ -1.47
SHS1YDL225W RAD54P32863 898 aa5.88□□□□□ -1.47
SHS1YDL225W IES2P40154 320 aa5.88□□□□□ -1.47
SHS1YDL225W DIT2P21595 489 aa5.87□□□□□ -1.47
SHS1YDL225W NUP42P49686 430 aaKnown RBP5.87□□□□□ -1.47
SHS1YDL225W PCS60P38137 543 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
SHS1YDL225W MID1P41821 548 aa5.86□□□□□ -1.47
SHS1YDL225W BCK2P33306 851 aa5.85□□□□□ -1.47
SHS1YDL225W YNR021WP53723 404 aaKnown RBP5.85□□□□□ -1.47
SHS1YDL225W ELP4Q02884 456 aaKnown RBP5.85□□□□□ -1.47
SHS1YDL225W SLI15P38283 698 aa5.84□□□□□ -1.47
SHS1YDL225W CHL1P22516 861 aaPredicted RBP5.82□□□□□ -1.48
SHS1YDL225W ILV3P39522 585 aaKnown RBP5.82□□□□□ -1.48
SHS1YDL225W GLC3P32775 704 aa5.82□□□□□ -1.48
SHS1YDL225W PRE3P38624 215 aa5.81□□□□□ -1.48
SHS1YDL225W DPL1Q05567 589 aa5.81□□□□□ -1.48
SHS1YDL225W PEX21P50091 288 aa5.8□□□□□ -1.48
SHS1YDL225W ARH1P48360 493 aa5.79□□□□□ -1.48
SHS1YDL225W NMA111P53920 997 aa5.79□□□□□ -1.48
SHS1YDL225W ATF2P53296 535 aa5.78□□□□□ -1.48
SHS1YDL225W HAP5Q02516 242 aa5.78□□□□□ -1.48
SHS1YDL225W MPC54Q08550 464 aa5.78□□□□□ -1.48
SHS1YDL225W AIM7Q12156 149 aa5.78□□□□□ -1.48
SHS1YDL225W KIN1P13185 1064 aa5.77□□□□□ -1.49
SHS1YDL225W ISU2Q12056 156 aa5.77□□□□□ -1.49
SHS1YDL225W SPT23P35210 1082 aa5.76□□□□□ -1.49
SHS1YDL225W PSE1P32337 1089 aaKnown RBP5.75□□□□□ -1.49
SHS1YDL225W ORC6P38826 435 aa5.75□□□□□ -1.49
SHS1YDL225W CDC73Q06697 393 aa5.75□□□□□ -1.49
SHS1YDL225W PTC2P39966 464 aaKnown RBP5.73□□□□□ -1.49
SHS1YDL225W CSC1Q06538 782 aa5.73□□□□□ -1.49
SHS1YDL225W RGR1P19263 1082 aa5.72□□□□□ -1.49
SHS1YDL225W DMA2P53924 522 aa5.72□□□□□ -1.49
SHS1YDL225W TAF7Q05021 590 aa5.72□□□□□ -1.49
SHS1YDL225W MVP1P40959 511 aaKnown RBP5.71□□□□□ -1.5
SHS1YDL225W BNI4P53858 892 aa5.71□□□□□ -1.5
SHS1YDL225W GAP1P19145 602 aaPredicted RBP5.69□□□□□ -1.5
SHS1YDL225W TFB4Q12004 338 aa5.69□□□□□ -1.5
SHS1YDL225W VRP1P37370 817 aa5.69□□□□□ -1.5
SHS1YDL225W TEA1P47988 759 aa5.69□□□□□ -1.5
SHS1YDL225W TUM1Q08686 304 aaKnown RBP5.69□□□□□ -1.5
SHS1YDL225W NPL4P33755 580 aa5.67□□□□□ -1.5
SHS1YDL225W GUA1P38625 525 aaKnown RBP5.67□□□□□ -1.5
SHS1YDL225W YRR1Q12172 810 aa5.67□□□□□ -1.5
SHS1YDL225W YDR344CQ05510 147 aa5.66□□□□□ -1.5
SHS1YDL225W YML082WQ04533 649 aaKnown RBP5.66□□□□□ -1.5
SHS1YDL225W YPR109WQ06104 294 aa5.66□□□□□ -1.5
SHS1YDL225W CLB5P30283 435 aa5.64□□□□□ -1.51
SHS1YDL225W CSN12P47130 423 aa5.62□□□□□ -1.51
SHS1YDL225W GYP1Q08484 637 aa5.62□□□□□ -1.51
SHS1YDL225W NIS1P53939 407 aa5.61□□□□□ -1.51
SHS1YDL225W PDR1P12383 1068 aa5.6□□□□□ -1.51
SHS1YDL225W XDJ1P39102 459 aa5.6□□□□□ -1.51
SHS1YDL225W FPK1P53739 893 aa5.59□□□□□ -1.52
SHS1YDL225W HPC2Q01448 625 aa5.59□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms