RNA–Protein interactions for RNA: YDL143W

CCT4, Transcript of Subunit of the cytosolic chaperonin Cct ring complex, yeastyeast

Gene CCT4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCT4YDL143W NUP159P40477 1460 aa16.56■□□□□ 0.24
CCT4YDL143W MLP2P40457 1679 aa16.55■□□□□ 0.24
CCT4YDL143W RPO21P04050 1733 aaKnown RBP16.54■□□□□ 0.24
CCT4YDL143W SNT2P53127 1403 aa16.54■□□□□ 0.24
CCT4YDL143W TAF7Q05021 590 aa16.53■□□□□ 0.24
CCT4YDL143W PDR15Q04182 1529 aaKnown RBP16.47■□□□□ 0.23
CCT4YDL143W YRF1-1P0CX20 1796 aa16.47■□□□□ 0.23
CCT4YDL143W YRF1-5P0CX21 1796 aa16.47■□□□□ 0.23
CCT4YDL143W YRF1-8P0CX22 1796 aa16.47■□□□□ 0.23
CCT4YDL143W ULS1Q08562 1619 aa16.46■□□□□ 0.23
CCT4YDL143W RTT106P40161 455 aa16.42■□□□□ 0.22
CCT4YDL143W LTE1P07866 1435 aa16.37■□□□□ 0.21
CCT4YDL143W IFH1P39520 1085 aa16.36■□□□□ 0.21
CCT4YDL143W GEA2P39993 1459 aaKnown RBP16.36■□□□□ 0.21
CCT4YDL143W VPS15P22219 1454 aa16.35■□□□□ 0.21
CCT4YDL143W MET10P39692 1035 aa16.31■□□□□ 0.2
CCT4YDL143W GEA1P47102 1408 aaPredicted RBP16.28■□□□□ 0.2
CCT4YDL143W IRC20Q06554 1556 aa16.26■□□□□ 0.19
CCT4YDL143W SPO14P36126 1683 aa16.24■□□□□ 0.19
CCT4YDL143W PDR12Q02785 1511 aa16.24■□□□□ 0.19
CCT4YDL143W GDB1Q06625 1536 aa16.16■□□□□ 0.18
CCT4YDL143W TY3B-GQ99315 1547 aa16.14■□□□□ 0.17
CCT4YDL143W NUP157P40064 1391 aaKnown RBP16.13■□□□□ 0.17
CCT4YDL143W CAT8P39113 1433 aa16.11■□□□□ 0.17
CCT4YDL143W BNI1P41832 1953 aa16.1■□□□□ 0.17
CCT4YDL143W DRS2P39524 1355 aa16.09■□□□□ 0.17
CCT4YDL143W ITT1Q04638 464 aa16.09■□□□□ 0.17
CCT4YDL143W YBT1P32386 1661 aa16.09■□□□□ 0.17
CCT4YDL143W PDR10P51533 1564 aa16.09■□□□□ 0.17
CCT4YDL143W NUP170P38181 1502 aa16.08■□□□□ 0.16
CCT4YDL143W IQG1Q12280 1495 aa16.03■□□□□ 0.16
CCT4YDL143W IKI3Q06706 1349 aaKnown RBP15.97■□□□□ 0.15
CCT4YDL143W BUD3P25558 1636 aa15.97■□□□□ 0.15
CCT4YDL143W ARO1P08566 1588 aaKnown RBP15.94■□□□□ 0.14
CCT4YDL143W CKB1P43639 278 aa15.93■□□□□ 0.14
CCT4YDL143W MMS1Q06211 1407 aa15.91■□□□□ 0.14
CCT4YDL143W DOP1Q03921 1698 aa15.87■□□□□ 0.13
CCT4YDL143W TRM3Q07527 1436 aa15.86■□□□□ 0.13
CCT4YDL143W YSP2Q06681 1438 aa15.84■□□□□ 0.13
CCT4YDL143W SRB8P25648 1427 aa15.83■□□□□ 0.13
CCT4YDL143W SEC7P11075 2009 aaKnown RBP15.8■□□□□ 0.12
CCT4YDL143W SSM4P40318 1319 aa15.77■□□□□ 0.12
CCT4YDL143W BNR1P40450 1375 aa15.74■□□□□ 0.11
CCT4YDL143W CHC1P22137 1653 aaKnown RBP15.74■□□□□ 0.11
CCT4YDL143W DNF2Q12675 1612 aa15.69■□□□□ 0.1
CCT4YDL143W BUD21Q08492 214 aaPredicted RBP15.67■□□□□ 0.1
CCT4YDL143W ABP1P15891 592 aaKnown RBP15.62■□□□□ 0.09
CCT4YDL143W YOR093CQ12275 1648 aa15.49■□□□□ 0.07
CCT4YDL143W GCN2P15442 1659 aa15.46■□□□□ 0.07
CCT4YDL143W URN1Q06525 465 aaKnown RBP15.42■□□□□ 0.06
CCT4YDL143W YAP3P38749 330 aa15.41■□□□□ 0.06
CCT4YDL143W NUP188P52593 1655 aaKnown RBP15.39■□□□□ 0.05
CCT4YDL143W MIF2P35201 549 aa15.37■□□□□ 0.05
CCT4YDL143W VMR1P38735 1592 aa15.35■□□□□ 0.05
CCT4YDL143W PDR5P33302 1511 aaKnown RBP15.32■□□□□ 0.04
CCT4YDL143W DNF3Q12674 1656 aa15.32■□□□□ 0.04
CCT4YDL143W IPL1P38991 367 aa15.32■□□□□ 0.04
CCT4YDL143W IML1P47170 1584 aa15.29■□□□□ 0.04
CCT4YDL143W TYS1P36421 394 aaKnown RBP15.26■□□□□ 0.03
CCT4YDL143W PAF1P38351 445 aa15.24■□□□□ 0.03
CCT4YDL143W PDR11P40550 1411 aa15.22■□□□□ 0.03
CCT4YDL143W NOP7P53261 605 aaKnown RBP15.18■□□□□ 0.02
CCT4YDL143W MAK10Q02197 733 aa15.15■□□□□ 0.02
CCT4YDL143W HAP1P0CE41 1502 aa15.15■□□□□ 0.02
CCT4YDL143W BFR2Q06631 534 aaKnown RBP15.15■□□□□ 0.02
CCT4YDL143W RAV1P47104 1357 aa15.13■□□□□ 0.01
CCT4YDL143W RTC1Q08281 1341 aa15.07■□□□□ 0
CCT4YDL143W USO1P25386 1790 aa14.96□□□□□ -0.02
CCT4YDL143W NUP192P47054 1683 aa14.96□□□□□ -0.02
CCT4YDL143W YFR006WP43590 535 aa14.92□□□□□ -0.02
CCT4YDL143W BCK1Q01389 1478 aa14.9□□□□□ -0.02
CCT4YDL143W TY1B-NL2Q99337 1749 aaKnown RBP14.89□□□□□ -0.03
CCT4YDL143W TAF5P38129 798 aa14.89□□□□□ -0.03
CCT4YDL143W ALD4P46367 519 aaKnown RBP14.89□□□□□ -0.03
CCT4YDL143W MRX12P47084 519 aa14.89□□□□□ -0.03
CCT4YDL143W ESL2P36168 1195 aa14.88□□□□□ -0.03
CCT4YDL143W RAD9P14737 1309 aa14.87□□□□□ -0.03
CCT4YDL143W KRE5P22023 1365 aa14.87□□□□□ -0.03
CCT4YDL143W CAB1Q04430 367 aa14.85□□□□□ -0.03
CCT4YDL143W RIA1P53893 1110 aa14.84□□□□□ -0.03
CCT4YDL143W YMR196WQ04336 1088 aa14.82□□□□□ -0.04
CCT4YDL143W CFT1Q06632 1357 aaKnown RBP14.82□□□□□ -0.04
CCT4YDL143W TY3B-IQ7LHG5 1498 aaKnown RBP14.76□□□□□ -0.05
CCT4YDL143W THI12P42883 340 aa14.75□□□□□ -0.05
CCT4YDL143W THI5P43534 340 aa14.75□□□□□ -0.05
CCT4YDL143W THI11P47183 340 aa14.75□□□□□ -0.05
CCT4YDL143W TAF8Q03750 510 aa14.75□□□□□ -0.05
CCT4YDL143W THI13Q07748 340 aa14.75□□□□□ -0.05
CCT4YDL143W NAP1P25293 417 aaKnown RBP14.74□□□□□ -0.05
CCT4YDL143W ORC1P54784 914 aaPredicted RBP14.74□□□□□ -0.05
CCT4YDL143W KIP3P53086 805 aaKnown RBP14.73□□□□□ -0.05
CCT4YDL143W YNR029CP53729 429 aaKnown RBP14.72□□□□□ -0.05
CCT4YDL143W POL5P39985 1022 aaKnown RBP14.71□□□□□ -0.05
CCT4YDL143W SPE2P21182 396 aa14.67□□□□□ -0.06
CCT4YDL143W YLR419WQ06698 1435 aaKnown RBP14.63□□□□□ -0.07
CCT4YDL143W SCT1P32784 759 aa14.58□□□□□ -0.08
CCT4YDL143W RCM1P53972 490 aa14.57□□□□□ -0.08
CCT4YDL143W CHZ1P40019 153 aaPredicted RBP14.54□□□□□ -0.08
CCT4YDL143W CPS1P27614 576 aa14.52□□□□□ -0.08
CCT4YDL143W PPH3P32345 308 aa14.51□□□□□ -0.09
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms