RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT2YDL007W IFH1P39520 1085 aa8.26□□□□□ -1.09
RPT2YDL007W DNF1P32660 1571 aa8.25□□□□□ -1.09
RPT2YDL007W SET1P38827 1080 aaKnown RBP8.25□□□□□ -1.09
RPT2YDL007W SAM3Q08986 587 aa8.25□□□□□ -1.09
RPT2YDL007W BNI1P41832 1953 aa8.23□□□□□ -1.09
RPT2YDL007W EAP1P36041 632 aaKnown RBP8.23□□□□□ -1.09
RPT2YDL007W ITT1Q04638 464 aa8.23□□□□□ -1.09
RPT2YDL007W WSC3Q12215 556 aa8.23□□□□□ -1.09
RPT2YDL007W YBL029C-AQ3E756 94 aa8.23□□□□□ -1.09
RPT2YDL007W VNX1P42839 908 aa8.21□□□□□ -1.1
RPT2YDL007W RPA190P10964 1664 aaKnown RBP8.2□□□□□ -1.1
RPT2YDL007W SPP1Q03012 353 aa8.19□□□□□ -1.1
RPT2YDL007W YOL036WQ08206 761 aa8.19□□□□□ -1.1
RPT2YDL007W MMS1Q06211 1407 aa8.19□□□□□ -1.1
RPT2YDL007W CDC25P04821 1589 aa8.19□□□□□ -1.1
RPT2YDL007W PTC3P34221 468 aaKnown RBP8.18□□□□□ -1.1
RPT2YDL007W GRE2Q12068 342 aaKnown RBP8.18□□□□□ -1.1
RPT2YDL007W GYP5Q12344 894 aa8.18□□□□□ -1.1
RPT2YDL007W GEA2P39993 1459 aaKnown RBP8.18□□□□□ -1.1
RPT2YDL007W TIF11P38912 153 aaKnown RBP8.17□□□□□ -1.1
RPT2YDL007W ATH1P48016 1211 aa8.16□□□□□ -1.1
RPT2YDL007W EDS1P38073 919 aa8.15□□□□□ -1.1
RPT2YDL007W SET4P42948 560 aa8.15□□□□□ -1.1
RPT2YDL007W SSN2P38931 1420 aa8.14□□□□□ -1.11
RPT2YDL007W GUT1P32190 709 aa8.14□□□□□ -1.11
RPT2YDL007W ATG2P53855 1592 aa8.14□□□□□ -1.11
RPT2YDL007W HTA1P04911 132 aaKnown RBP8.12□□□□□ -1.11
RPT2YDL007W HTA2P04912 132 aa8.12□□□□□ -1.11
RPT2YDL007W ULI1P43604 169 aa8.11□□□□□ -1.11
RPT2YDL007W IRC20Q06554 1556 aa8.11□□□□□ -1.11
RPT2YDL007W ESC1Q03661 1658 aaKnown RBP8.11□□□□□ -1.11
RPT2YDL007W TAF7Q05021 590 aa8.09□□□□□ -1.11
RPT2YDL007W YPR148CQ06523 435 aa8.08□□□□□ -1.12
RPT2YDL007W SAS10Q12136 610 aaPredicted RBP8.08□□□□□ -1.12
RPT2YDL007W LEO1P38439 464 aa8.06□□□□□ -1.12
RPT2YDL007W SSK2P53599 1579 aa8.06□□□□□ -1.12
RPT2YDL007W DCW1P36091 449 aa8.05□□□□□ -1.12
RPT2YDL007W CKB1P43639 278 aa8.05□□□□□ -1.12
RPT2YDL007W JIP4Q03361 876 aa8.05□□□□□ -1.12
RPT2YDL007W XRN1P22147 1528 aaKnown RBP8.05□□□□□ -1.12
RPT2YDL007W TRP5P00931 707 aaKnown RBP8.04□□□□□ -1.12
RPT2YDL007W RPO31P04051 1460 aa8.04□□□□□ -1.12
RPT2YDL007W SIS1P25294 352 aaKnown RBP8.03□□□□□ -1.12
RPT2YDL007W VPS70P47161 811 aa8.02□□□□□ -1.13
RPT2YDL007W IOC2Q12072 812 aa8.02□□□□□ -1.13
RPT2YDL007W SKI3P17883 1432 aaKnown RBP8.01□□□□□ -1.13
RPT2YDL007W YNL035CP53962 389 aaKnown RBP8.01□□□□□ -1.13
RPT2YDL007W LDB19Q12502 818 aa8.01□□□□□ -1.13
RPT2YDL007W PTC4P38089 393 aa8□□□□□ -1.13
RPT2YDL007W YEL023CP39992 682 aa8□□□□□ -1.13
RPT2YDL007W DRS2P39524 1355 aa7.99□□□□□ -1.13
RPT2YDL007W SEC61P32915 480 aa7.98□□□□□ -1.13
RPT2YDL007W TFG1P41895 735 aaPredicted RBP7.98□□□□□ -1.13
RPT2YDL007W RKR1Q04781 1562 aa7.96□□□□□ -1.13
RPT2YDL007W RTG1P32607 177 aa7.95□□□□□ -1.14
RPT2YDL007W REF2P42073 533 aaPredicted RBP7.95□□□□□ -1.14
RPT2YDL007W YGR273CP53329 174 aa7.95□□□□□ -1.14
RPT2YDL007W AI4P03878 556 aa7.93□□□□□ -1.14
RPT2YDL007W MAK21Q12176 1025 aaKnown RBP7.93□□□□□ -1.14
RPT2YDL007W MPH3P0CE00 602 aa7.91□□□□□ -1.14
RPT2YDL007W FKH1P40466 484 aa7.91□□□□□ -1.14
RPT2YDL007W NCR1Q12200 1170 aa7.91□□□□□ -1.14
RPT2YDL007W DAN4P47179 1161 aa7.89□□□□□ -1.15
RPT2YDL007W CHD1P32657 1468 aa7.89□□□□□ -1.15
RPT2YDL007W UFD4P33202 1483 aa7.89□□□□□ -1.15
RPT2YDL007W KIC1P38692 1080 aa7.88□□□□□ -1.15
RPT2YDL007W SOL3P38858 249 aa7.88□□□□□ -1.15
RPT2YDL007W YJL171CP46992 396 aa7.88□□□□□ -1.15
RPT2YDL007W YOR093CQ12275 1648 aa7.87□□□□□ -1.15
RPT2YDL007W DNF2Q12675 1612 aa7.87□□□□□ -1.15
RPT2YDL007W LEU3P08638 886 aa7.87□□□□□ -1.15
RPT2YDL007W SPB4P25808 606 aaPredicted RBP7.86□□□□□ -1.15
RPT2YDL007W NST1P53935 1240 aa7.86□□□□□ -1.15
RPT2YDL007W PBS2P08018 668 aa7.85□□□□□ -1.15
RPT2YDL007W RPP1BP10622 106 aaKnown RBP7.85□□□□□ -1.15
RPT2YDL007W VHR2P40041 505 aa7.85□□□□□ -1.15
RPT2YDL007W KEX1P09620 729 aa7.84□□□□□ -1.15
RPT2YDL007W UBP14P38237 781 aaKnown RBP7.84□□□□□ -1.15
RPT2YDL007W AIR2Q12476 344 aaKnown RBP7.84□□□□□ -1.15
RPT2YDL007W RAD54P32863 898 aa7.83□□□□□ -1.16
RPT2YDL007W YLR326WQ06170 240 aaKnown RBP7.83□□□□□ -1.16
RPT2YDL007W YDL129WQ07555 291 aa7.83□□□□□ -1.16
RPT2YDL007W COX6P00427 148 aa7.82□□□□□ -1.16
RPT2YDL007W DSF2P38213 736 aa7.8□□□□□ -1.16
RPT2YDL007W BMT6Q12291 365 aa7.8□□□□□ -1.16
RPT2YDL007W PML39Q03760 334 aa7.79□□□□□ -1.16
RPT2YDL007W YPK9Q12697 1472 aa7.79□□□□□ -1.16
RPT2YDL007W MAM3Q12296 706 aa7.78□□□□□ -1.16
RPT2YDL007W PEX29Q03370 554 aa7.78□□□□□ -1.16
RPT2YDL007W PAN1P32521 1480 aa7.77□□□□□ -1.17
RPT2YDL007W PCS60P38137 543 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
RPT2YDL007W YDR090CQ03193 310 aa7.76□□□□□ -1.17
RPT2YDL007W SLI15P38283 698 aa7.75□□□□□ -1.17
RPT2YDL007W SAP30P38429 201 aa7.75□□□□□ -1.17
RPT2YDL007W ILV3P39522 585 aaKnown RBP7.74□□□□□ -1.17
RPT2YDL007W NOP2P40991 618 aaKnown RBP7.74□□□□□ -1.17
RPT2YDL007W ESP1Q03018 1630 aa7.72□□□□□ -1.17
RPT2YDL007W VPS15P22219 1454 aa7.7□□□□□ -1.18
RPT2YDL007W DPL1Q05567 589 aa7.7□□□□□ -1.18
RPT2YDL007W MID1P41821 548 aa7.69□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms