RNA–Protein interactions for RNA: YCR065W

HCM1, Transcript of Forkhead transcription factor, yeastyeast

Gene HCM1, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HCM1YCR065W RTG1P32607 177 aa6.84□□□□□ -1.31
HCM1YCR065W ATH1P48016 1211 aa6.84□□□□□ -1.31
HCM1YCR065W GUT1P32190 709 aa6.83□□□□□ -1.32
HCM1YCR065W DCW1P36091 449 aa6.83□□□□□ -1.32
HCM1YCR065W MSB4Q12317 492 aa6.83□□□□□ -1.32
HCM1YCR065W SOL3P38858 249 aa6.8□□□□□ -1.32
HCM1YCR065W NCR1Q12200 1170 aa6.79□□□□□ -1.32
HCM1YCR065W TRP5P00931 707 aaKnown RBP6.78□□□□□ -1.32
HCM1YCR065W HTA1P04911 132 aaKnown RBP6.77□□□□□ -1.32
HCM1YCR065W HTA2P04912 132 aa6.77□□□□□ -1.32
HCM1YCR065W EAP1P36041 632 aaKnown RBP6.77□□□□□ -1.32
HCM1YCR065W NST1P53935 1240 aa6.77□□□□□ -1.32
HCM1YCR065W ABP1P15891 592 aaKnown RBP6.77□□□□□ -1.33
HCM1YCR065W CKB1P43639 278 aa6.76□□□□□ -1.33
HCM1YCR065W YGR273CP53329 174 aa6.75□□□□□ -1.33
HCM1YCR065W VHR2P40041 505 aa6.74□□□□□ -1.33
HCM1YCR065W YEL023CP39992 682 aa6.73□□□□□ -1.33
HCM1YCR065W REF2P42073 533 aaPredicted RBP6.73□□□□□ -1.33
HCM1YCR065W UBP14P38237 781 aaKnown RBP6.72□□□□□ -1.33
HCM1YCR065W YLR326WQ06170 240 aaKnown RBP6.72□□□□□ -1.33
HCM1YCR065W PBS2P08018 668 aa6.71□□□□□ -1.33
HCM1YCR065W ILV3P39522 585 aaKnown RBP6.71□□□□□ -1.33
HCM1YCR065W YNL035CP53962 389 aaKnown RBP6.71□□□□□ -1.33
HCM1YCR065W SEC61P32915 480 aa6.71□□□□□ -1.34
HCM1YCR065W SPB4P25808 606 aaPredicted RBP6.7□□□□□ -1.34
HCM1YCR065W YDR090CQ03193 310 aa6.69□□□□□ -1.34
HCM1YCR065W KEX1P09620 729 aa6.68□□□□□ -1.34
HCM1YCR065W BCK2P33306 851 aa6.68□□□□□ -1.34
HCM1YCR065W DSF2P38213 736 aa6.68□□□□□ -1.34
HCM1YCR065W LEU3P08638 886 aa6.67□□□□□ -1.34
HCM1YCR065W AI4P03878 556 aa6.66□□□□□ -1.34
HCM1YCR065W MPH3P0CE00 602 aa6.66□□□□□ -1.34
HCM1YCR065W PTC4P38089 393 aa6.66□□□□□ -1.34
HCM1YCR065W DAN4P47179 1161 aa6.66□□□□□ -1.34
HCM1YCR065W PCS60P38137 543 aaKnown RBP RIP-Chip data6.65□□□□□ -1.35not detected
HCM1YCR065W JIP4Q03361 876 aa6.65□□□□□ -1.35
HCM1YCR065W COX6P00427 148 aa6.64□□□□□ -1.35
HCM1YCR065W SAP30P38429 201 aa6.63□□□□□ -1.35
HCM1YCR065W RAD54P32863 898 aa6.61□□□□□ -1.35
HCM1YCR065W IES2P40154 320 aa6.61□□□□□ -1.35
HCM1YCR065W MAK21Q12176 1025 aaKnown RBP6.61□□□□□ -1.35
HCM1YCR065W MAM3Q12296 706 aa6.61□□□□□ -1.35
HCM1YCR065W SLI15P38283 698 aa6.6□□□□□ -1.35
HCM1YCR065W NUP42P49686 430 aaKnown RBP6.58□□□□□ -1.36
HCM1YCR065W CHL1P22516 861 aaPredicted RBP6.58□□□□□ -1.36
HCM1YCR065W KIC1P38692 1080 aa6.58□□□□□ -1.36
HCM1YCR065W MID1P41821 548 aa6.58□□□□□ -1.36
HCM1YCR065W TFG1P41895 735 aaPredicted RBP6.57□□□□□ -1.36
HCM1YCR065W PML39Q03760 334 aa6.57□□□□□ -1.36
HCM1YCR065W DIT2P21595 489 aa6.55□□□□□ -1.36
HCM1YCR065W PRE3P38624 215 aa6.54□□□□□ -1.36
HCM1YCR065W YDL129WQ07555 291 aa6.53□□□□□ -1.36
HCM1YCR065W ORC6P38826 435 aa6.52□□□□□ -1.37
HCM1YCR065W CDC73Q06697 393 aa6.52□□□□□ -1.37
HCM1YCR065W YDR344CQ05510 147 aa6.52□□□□□ -1.37
HCM1YCR065W RGA2Q06407 1009 aa6.51□□□□□ -1.37
HCM1YCR065W GLC3P32775 704 aa6.5□□□□□ -1.37
HCM1YCR065W MPC54Q08550 464 aa6.5□□□□□ -1.37
HCM1YCR065W YNR021WP53723 404 aaKnown RBP6.49□□□□□ -1.37
HCM1YCR065W GAP1P19145 602 aaPredicted RBP6.48□□□□□ -1.37
HCM1YCR065W LEO1P38439 464 aa6.48□□□□□ -1.37
HCM1YCR065W PEX29Q03370 554 aa6.48□□□□□ -1.37
HCM1YCR065W RPN1P38764 993 aaKnown RBP6.47□□□□□ -1.37
HCM1YCR065W DPL1Q05567 589 aa6.45□□□□□ -1.38
HCM1YCR065W VRP1P37370 817 aa6.45□□□□□ -1.38
HCM1YCR065W XDJ1P39102 459 aa6.45□□□□□ -1.38
HCM1YCR065W RGR1P19263 1082 aa6.44□□□□□ -1.38
HCM1YCR065W PSE1P32337 1089 aaKnown RBP6.44□□□□□ -1.38
HCM1YCR065W MVP1P40959 511 aaKnown RBP6.44□□□□□ -1.38
HCM1YCR065W NMA111P53920 997 aa6.42□□□□□ -1.38
HCM1YCR065W CSC1Q06538 782 aa6.41□□□□□ -1.38
HCM1YCR065W AIM7Q12156 149 aa6.4□□□□□ -1.38
HCM1YCR065W RPP1BP10622 106 aaKnown RBP6.39□□□□□ -1.39
HCM1YCR065W DPS1P04802 557 aaKnown RBP6.39□□□□□ -1.39
HCM1YCR065W KIN1P13185 1064 aa6.39□□□□□ -1.39
HCM1YCR065W ARH1P48360 493 aa6.39□□□□□ -1.39
HCM1YCR065W ATF2P53296 535 aa6.39□□□□□ -1.39
HCM1YCR065W ISU2Q12056 156 aa6.39□□□□□ -1.39
HCM1YCR065W HAP5Q02516 242 aa6.38□□□□□ -1.39
HCM1YCR065W YPR109WQ06104 294 aa6.38□□□□□ -1.39
HCM1YCR065W TUM1Q08686 304 aaKnown RBP6.38□□□□□ -1.39
HCM1YCR065W TFB4Q12004 338 aa6.38□□□□□ -1.39
HCM1YCR065W PEX21P50091 288 aa6.36□□□□□ -1.39
HCM1YCR065W YRR1Q12172 810 aa6.36□□□□□ -1.39
HCM1YCR065W ELP4Q02884 456 aaKnown RBP6.36□□□□□ -1.39
HCM1YCR065W PDR1P12383 1068 aa6.35□□□□□ -1.39
HCM1YCR065W TEA1P47988 759 aa6.35□□□□□ -1.39
HCM1YCR065W SRC1Q03707 834 aa6.33□□□□□ -1.4
HCM1YCR065W NIS1P53939 407 aa6.32□□□□□ -1.4
HCM1YCR065W BNI4P53858 892 aa6.31□□□□□ -1.4
HCM1YCR065W RAM1P22007 431 aa6.3□□□□□ -1.4
HCM1YCR065W CLB5P30283 435 aa6.3□□□□□ -1.4
HCM1YCR065W RGA1P39083 1007 aa6.3□□□□□ -1.4
HCM1YCR065W YPR015CQ12531 247 aa6.3□□□□□ -1.4
HCM1YCR065W NUD1P32336 851 aa6.29□□□□□ -1.4
HCM1YCR065W GUA1P38625 525 aaKnown RBP6.29□□□□□ -1.4
HCM1YCR065W SPT23P35210 1082 aa6.28□□□□□ -1.4
HCM1YCR065W STR2P47164 639 aa6.27□□□□□ -1.41
HCM1YCR065W FPK1P53739 893 aa6.27□□□□□ -1.41
HCM1YCR065W KTR1P27810 393 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms