RNA–Protein interactions for RNA: YBR147W

RTC2, Transcript of Putative vacuolar membrane transporter for cationic amino acids, yeastyeast

Gene RTC2, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC2YBR147W ULS1Q08562 1619 aa10.33□□□□□ -0.76
RTC2YBR147W RTT106P40161 455 aa10.28□□□□□ -0.76
RTC2YBR147W SNT2P53127 1403 aa10.26□□□□□ -0.77
RTC2YBR147W ESC1Q03661 1658 aaKnown RBP10.25□□□□□ -0.77
RTC2YBR147W SSM4P40318 1319 aa10.24□□□□□ -0.77
RTC2YBR147W GEA2P39993 1459 aaKnown RBP10.23□□□□□ -0.77
RTC2YBR147W TY1B-JR2P47100 1755 aaKnown RBP10.22□□□□□ -0.77
RTC2YBR147W TY1B-ER2Q03619 1755 aa10.22□□□□□ -0.77
RTC2YBR147W TY1B-MR1Q04214 1755 aa10.22□□□□□ -0.77
RTC2YBR147W TY1B-MR2Q04670 1755 aaKnown RBP10.22□□□□□ -0.77
RTC2YBR147W TY1B-LR1Q12088 1755 aaKnown RBP10.22□□□□□ -0.77
RTC2YBR147W TY1B-NL1Q12112 1755 aa10.22□□□□□ -0.77
RTC2YBR147W TY1B-GR1Q12141 1755 aa10.22□□□□□ -0.77
RTC2YBR147W TY1B-BLQ12490 1755 aa10.22□□□□□ -0.77
RTC2YBR147W CAT8P39113 1433 aa10.22□□□□□ -0.77
RTC2YBR147W NTE1Q04958 1679 aa10.19□□□□□ -0.78
RTC2YBR147W RPO21P04050 1733 aaKnown RBP10.16□□□□□ -0.78
RTC2YBR147W RPA190P10964 1664 aaKnown RBP10.15□□□□□ -0.78
RTC2YBR147W TY3B-GQ99315 1547 aa10.15□□□□□ -0.78
RTC2YBR147W VPS15P22219 1454 aa10.14□□□□□ -0.79
RTC2YBR147W IRC20Q06554 1556 aa10.14□□□□□ -0.79
RTC2YBR147W YBT1P32386 1661 aa10.13□□□□□ -0.79
RTC2YBR147W BUD31P25337 157 aaPredicted RBP10.13□□□□□ -0.79
RTC2YBR147W NUP159P40477 1460 aa10.1□□□□□ -0.79
RTC2YBR147W DNF1P32660 1571 aa10.09□□□□□ -0.79
RTC2YBR147W SRB8P25648 1427 aa10.08□□□□□ -0.8
RTC2YBR147W MET10P39692 1035 aa10.06□□□□□ -0.8
RTC2YBR147W POL5P39985 1022 aaKnown RBP10.05□□□□□ -0.8
RTC2YBR147W PDR12Q02785 1511 aa10.03□□□□□ -0.8
RTC2YBR147W PDR10P51533 1564 aa10.02□□□□□ -0.81
RTC2YBR147W CKB1P43639 278 aa10.01□□□□□ -0.81
RTC2YBR147W ARO1P08566 1588 aaKnown RBP10.01□□□□□ -0.81
RTC2YBR147W MMS1Q06211 1407 aa10□□□□□ -0.81
RTC2YBR147W MET5P47169 1442 aa9.99□□□□□ -0.81
RTC2YBR147W GCN2P15442 1659 aa9.99□□□□□ -0.81
RTC2YBR147W BUD21Q08492 214 aaPredicted RBP9.98□□□□□ -0.81
RTC2YBR147W NUP157P40064 1391 aaKnown RBP9.98□□□□□ -0.81
RTC2YBR147W GDB1Q06625 1536 aa9.97□□□□□ -0.81
RTC2YBR147W NOP7P53261 605 aaKnown RBP9.96□□□□□ -0.82
RTC2YBR147W SPO14P36126 1683 aa9.94□□□□□ -0.82
RTC2YBR147W BUD3P25558 1636 aa9.93□□□□□ -0.82
RTC2YBR147W IQG1Q12280 1495 aa9.92□□□□□ -0.82
RTC2YBR147W PAF1P38351 445 aa9.92□□□□□ -0.82
RTC2YBR147W SEC3P33332 1336 aaKnown RBP9.91□□□□□ -0.82
RTC2YBR147W YRF1-1P0CX20 1796 aa9.9□□□□□ -0.82
RTC2YBR147W YRF1-5P0CX21 1796 aa9.9□□□□□ -0.82
RTC2YBR147W YRF1-8P0CX22 1796 aa9.9□□□□□ -0.82
RTC2YBR147W YSP2Q06681 1438 aa9.85□□□□□ -0.83
RTC2YBR147W ENP1P38333 483 aaKnown RBP9.85□□□□□ -0.83
RTC2YBR147W PDR5P33302 1511 aaKnown RBP9.82□□□□□ -0.84
RTC2YBR147W BNR1P40450 1375 aa9.82□□□□□ -0.84
RTC2YBR147W NSR1P27476 414 aaKnown RBP RIP-Chip data9.8□□□□□ -0.84not detected
RTC2YBR147W SCT1P32784 759 aa9.79□□□□□ -0.84
RTC2YBR147W BFR2Q06631 534 aaKnown RBP9.79□□□□□ -0.84
RTC2YBR147W TSR3Q12094 313 aaKnown RBP9.79□□□□□ -0.84
RTC2YBR147W SEC7P11075 2009 aaKnown RBP9.78□□□□□ -0.84
RTC2YBR147W TRM3Q07527 1436 aa9.76□□□□□ -0.85
RTC2YBR147W YOR093CQ12275 1648 aa9.76□□□□□ -0.85
RTC2YBR147W LTE1P07866 1435 aa9.74□□□□□ -0.85
RTC2YBR147W NOP2P40991 618 aaKnown RBP9.73□□□□□ -0.85
RTC2YBR147W CHC1P22137 1653 aaKnown RBP9.73□□□□□ -0.85
RTC2YBR147W MHP1P43638 1398 aa9.72□□□□□ -0.85
RTC2YBR147W SPT7P35177 1332 aa9.7□□□□□ -0.86
RTC2YBR147W DOP1Q03921 1698 aa9.7□□□□□ -0.86
RTC2YBR147W DRS2P39524 1355 aa9.68□□□□□ -0.86
RTC2YBR147W RAV1P47104 1357 aa9.68□□□□□ -0.86
RTC2YBR147W RTC1Q08281 1341 aa9.66□□□□□ -0.86
RTC2YBR147W YGL015CP33199 130 aa9.64□□□□□ -0.87
RTC2YBR147W ESL2P36168 1195 aa9.64□□□□□ -0.87
RTC2YBR147W URN1Q06525 465 aaKnown RBP9.64□□□□□ -0.87
RTC2YBR147W TY3B-IQ7LHG5 1498 aaKnown RBP9.63□□□□□ -0.87
RTC2YBR147W NUP188P52593 1655 aaKnown RBP9.62□□□□□ -0.87
RTC2YBR147W RPG1P38249 964 aaKnown RBP9.61□□□□□ -0.87
RTC2YBR147W ISW2Q08773 1120 aa9.61□□□□□ -0.87
RTC2YBR147W IML1P47170 1584 aa9.6□□□□□ -0.87
RTC2YBR147W DNF2Q12675 1612 aa9.58□□□□□ -0.88
RTC2YBR147W ORC1P54784 914 aaPredicted RBP9.58□□□□□ -0.88
RTC2YBR147W VMR1P38735 1592 aa9.58□□□□□ -0.88
RTC2YBR147W TAF5P38129 798 aa9.57□□□□□ -0.88
RTC2YBR147W PDS5Q04264 1277 aa9.55□□□□□ -0.88
RTC2YBR147W KIP3P53086 805 aaKnown RBP9.54□□□□□ -0.88
RTC2YBR147W NAP1P25293 417 aaKnown RBP9.53□□□□□ -0.88
RTC2YBR147W PDR11P40550 1411 aa9.53□□□□□ -0.88
RTC2YBR147W YLR419WQ06698 1435 aaKnown RBP9.53□□□□□ -0.88
RTC2YBR147W LEU3P08638 886 aa9.52□□□□□ -0.89
RTC2YBR147W PSD2P53037 1138 aaKnown RBP9.52□□□□□ -0.89
RTC2YBR147W IPL1P38991 367 aa9.48□□□□□ -0.89
RTC2YBR147W PRS1P32895 427 aaKnown RBP9.47□□□□□ -0.89
RTC2YBR147W SPE2P21182 396 aa9.46□□□□□ -0.9
RTC2YBR147W NUP192P47054 1683 aa9.43□□□□□ -0.9
RTC2YBR147W ITT1Q04638 464 aa9.43□□□□□ -0.9
RTC2YBR147W YAP3P38749 330 aa9.41□□□□□ -0.9
RTC2YBR147W ALD4P46367 519 aaKnown RBP9.41□□□□□ -0.9
RTC2YBR147W MLP1Q02455 1875 aaKnown RBP9.4□□□□□ -0.91
RTC2YBR147W HAP1P0CE41 1502 aa9.4□□□□□ -0.91
RTC2YBR147W TYS1P36421 394 aaKnown RBP9.39□□□□□ -0.91
RTC2YBR147W TAF8Q03750 510 aa9.39□□□□□ -0.91
RTC2YBR147W RPP0P05317 312 aaKnown RBP9.38□□□□□ -0.91
RTC2YBR147W BCK1Q01389 1478 aa9.38□□□□□ -0.91
RTC2YBR147W BNI1P41832 1953 aa9.37□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms